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CBS51388_004032-T1, CBS51388_004032-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004032-T1
Unique NameCBS51388_004032-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:247238..248262-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004032-T1 ID=CBS51388_004032-T1|Name=CBS51388_004032-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1025bp|location=Sequence derived from alignment at An06:247238..248262- (Aspergillus niger CBS 513.88)
ATGAGCCTCACTTGCACGCACGTCACACCAGAATGTCCCGTCACGGCGAC
AACATATGGCTACTATCCCAACCTAGGCGGTAATATCTTTTTCGCCGTCT
ACTTTGGCCTACTCGGCACCCTCCAACTTGGTCTCGGCGTCTACTACCGC
TCCTGGACCATGTTGATAGCGATGGTAATCGGCGGATACATGGAACTAGC
AGGATACATCGGCCGAATCTTAATGAACCATAATCCCTGGGACCAAGGCG
GCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGCCCCGACCTTCATCGCC
GCCGGTATCTATCTCACCCTGAAGCACGTCATCCTCTCCTTGGGCCCAGA
ACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGGATCTTTATCAGCTGTG
ATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGGTGGTGTTGCCGCTGCA
GCGGGCAGCGAGAATCAGAATATGCTGAAGGTGGGCGATGATATCATGGT
GGCGGGTATCGCCTTCCAGGTGGGCACGATGTCGGTTTGTGGTCTGTTGG
CGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGGACCCGGTTTGGGCGGC
GAGAAGTATATTGATGAGAATGGGAATCTCACTGGGCCGAAGCACCTCAG
GGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTTGCTACTTTGATTCGGT
GTATTTATCGGTAAGTTCCCTCTCTACTTCAGCGCTCTCAAGCTACGGAC
GATACAATGTACTAACATAGTTTGCCGTGGGTAGTATTCCCGAAATGGCC
GGTGGATGGGGTAACCCGCTCATGCAGAAGGAGAATGAATTCTTGGTTTT
GGATGGAATGTGAGTATTCCTTTTGTTTATGTTTTCCCTTCTATGTCATG
AATCCAGACGTACTGATTAGAGTTTTAGGATGATGGCCATCGCCGTGAGC
TGCCTTACCTACCTTTACCCTGGATTCTTCCTGCAATCTATCCGGAAGGG
TATGAAGAAGACTCCGAAGGCCTAG
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Coding sequence (CDS) from alignment at An06:247238..248262-

>CBS51388_004032-T1 ID=CBS51388_004032-T1|Name=CBS51388_004032-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2646bp|location=Sequence derived from alignment at An06:247238..248262- (Aspergillus niger CBS 513.88)
GATGATGGCCATCGCCGTGAGCTGCCTTACCTACCTTTACCCTGGATTCT
TCCTGCAATCTATCCGGAAGGGTATGAAGAAGACTCCGAAGGCCTAGTAT
TCCCGAAATGGCCGGTGGATGGGGTAACCCGCTCATGCAGAAGGAGAATG
AATTCTTGGTTTTGGATGGAATATGAGCCTCACTTGCACGCACGTCACAC
CAGAATGTCCCGTCACGGCGACAACATATGGCTACTATCCCAACCTAGGC
GGTAATATCTTTTTCGCCGTCTACTTTGGCCTACTCGGCACCCTCCAACT
TGGTCTCGGCGTCTACTACCGCTCCTGGACCATGTTGATAGCGATGGTAA
TCGGCGGATACATGGAACTAGCAGGATACATCGGCCGAATCTTAATGAAC
CATAATCCCTGGGACCAAGGCGGCTTCAAACTGCAAATTGTCTGTCTCGT
GCTCGCCCCGACCTTCATCGCCGCCGGTATCTATCTCACCCTGAAGCACG
TCATCCTCTCCTTGGGCCCAGAACACTCGCGTCTCAAGCCCCGGCTCTTT
ACCTGGATCTTTATCAGCTGTGATGTCGGATCGCTCATTCTCCAGGCCGC
AGGTGGTGGTGTTGCCGCTGCAGCGGGCAGCGAGAATCAGAATATGCTGA
AGGTGGGCGATGATATCATGGTGGCGGGTATCGCCTTCCAGGTGGGCACG
ATGTCGGTTTGTGGTCTGTTGGCGCTGGATTTCTTTATCCGCGTTGTGAG
AAAGGGACCCGGTTTGGGCGGCGAGAAGTATATTGATGAGAATGGGAATC
TCACTGGGCCGAAGCACCTCAGGGTTGTTGTTTGGGCGGGCATCGTGGCT
TACTTTGCTACTTTGATTCGGTGTATTTATCGGATGATGGCCATCGCCGT
GAGCTGCCTTACCTACCTTTACCCTGGATTCTTCCTGCAATCTATCCGGA
AGGGTATGAAGAAGACTCCGAAGGCCTAGTATTCCCGAAATGGCCGGTGG
ATGGGGTAACCCGCTCATGCAGAAGGAGAATGAATTCTTGGTTTTGGATG
GAATATGAGCCTCACTTGCACGCACGTCACACCAGAATGTCCCGTCACGG
CGACAACATATGGCTACTATCCCAACCTAGGCGGTAATATCTTTTTCGCC
GTCTACTTTGGCCTACTCGGCACCCTCCAACTTGGTCTCGGCGTCTACTA
CCGCTCCTGGACCATGTTGATAGCGATGGTAATCGGCGGATACATGGAAC
TAGCAGGATACATCGGCCGAATCTTAATGAACCATAATCCCTGGGACCAA
GGCGGCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGCCCCGACCTTCAT
CGCCGCCGGTATCTATCTCACCCTGAAGCACGTCATCCTCTCCTTGGGCC
CAGAACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGGATCTTTATCAGC
TGTGATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGGTGGTGTTGCCGC
TGCAGCGGGCAGCGAGAATCAGAATATGCTGAAGGTGGGCGATGATATCA
TGGTGGCGGGTATCGCCTTCCAGGTGGGCACGATGTCGGTTTGTGGTCTG
TTGGCGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGGACCCGGTTTGGG
CGGCGAGAAGTATATTGATGAGAATGGGAATCTCACTGGGCCGAAGCACC
TCAGGGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTTGCTACTTTGATT
CGGTGTATTTATCGGATGATGGCCATCGCCGTGAGCTGCCTTACCTACCT
TTACCCTGGATTCTTCCTGCAATCTATCCGGAAGGGTATGAAGAAGACTC
CGAAGGCCTAGTATTCCCGAAATGGCCGGTGGATGGGGTAACCCGCTCAT
GCAGAAGGAGAATGAATTCTTGGTTTTGGATGGAATATGAGCCTCACTTG
CACGCACGTCACACCAGAATGTCCCGTCACGGCGACAACATATGGCTACT
ATCCCAACCTAGGCGGTAATATCTTTTTCGCCGTCTACTTTGGCCTACTC
GGCACCCTCCAACTTGGTCTCGGCGTCTACTACCGCTCCTGGACCATGTT
GATAGCGATGGTAATCGGCGGATACATGGAACTAGCAGGATACATCGGCC
GAATCTTAATGAACCATAATCCCTGGGACCAAGGCGGCTTCAAACTGCAA
ATTGTCTGTCTCGTGCTCGCCCCGACCTTCATCGCCGCCGGTATCTATCT
CACCCTGAAGCACGTCATCCTCTCCTTGGGCCCAGAACACTCGCGTCTCA
AGCCCCGGCTCTTTACCTGGATCTTTATCAGCTGTGATGTCGGATCGCTC
ATTCTCCAGGCCGCAGGTGGTGGTGTTGCCGCTGCAGCGGGCAGCGAGAA
TCAGAATATGCTGAAGGTGGGCGATGATATCATGGTGGCGGGTATCGCCT
TCCAGGTGGGCACGATGTCGGTTTGTGGTCTGTTGGCGCTGGATTTCTTT
ATCCGCGTTGTGAGAAAGGGACCCGGTTTGGGCGGCGAGAAGTATATTGA
TGAGAATGGGAATCTCACTGGGCCGAAGCACCTCAGGGTTGTTGTTTGGG
CGGGCATCGTGGCTTACTTTGCTACTTTGATTCGGTGTATTTATCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004032CBS51388_004032Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004032-T1CBS51388_004032-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004032-T1.cdsCBS51388_004032-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004032-T1.exon3CBS51388_004032-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004032-T1.exon2CBS51388_004032-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004032-T1.exon1CBS51388_004032-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:247238..248262 -
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