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Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:449978..452211- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004097-T1 ID=CBS51388_004097-T1|Name=CBS51388_004097-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2234bp|location=Sequence derived from alignment at An06:449978..452211- (Aspergillus niger CBS 513.88)
ATGGCACAACCCGATCTCACATCGCATCACGTCAATTACCTAATATGGAG
GTATGTATCAGAGTCCCTTTCCAACCTCCTTCTGCCGTAACACATCCCTA
CCATGCTGCGTCATTGGGCTTCTCGGCGGTTTGTATGCATTGCTAACTTC
TTTATAGGTATCTTCAAGAATCTGGTATTATTCTCTCCCCATCATTTGCT
GCTTATCCTTTCTTCATGGGAACAGCAAACTAACTTTCCCACAGGGCATG
GCGAGGCTGCACTCACCTTACAGCGCGCGTGGAATCAAGACCCGCAGAGT
TTGCCGTTTGCCCCATACATCAAAACTCATGCTCTGGTATCCTTGGTGCA
AAAGGGCCTGCAGTATCATGAACTAGAGCATTCCCTCGACAGGGTATGAT
ATTCATTGATCATTTCGTTACGCGCTCCCAAAAACTTTTGGAGTCATTTA
TAAAATCCGAAATTTATGAGAACTAATGAAATGAACAGGATGGAAATCCT
ACGGCCTTCACATCGTCTGACTACTTTTTCGGGCCTACGCCGCTGGAACC
CGAAACTGAAAAGGGTCAAAGTGGCCCCGGGGAGGCAGGCGTTGGCACAG
ACCAGGCGCCTGTCTCGCCCACAAGCAAAGTTCCGCGAGATGGCGGCGTG
ATTAACGGTCACTTGACGGCCGAGGCGGCGGCGGCACCCCAAGCACCAGC
ACCAGCACCACCTCAAGCTCCCACCAGTGTGAAGAAGCCGCATAAGAATG
GAGAGGCCAACGGTGATGAAACTCCCATGGAAATTGACACTAACGGAGTA
ACGACTGAAAGCAAACCCGAAGTAGTCGATGAGTCGCCTCGAACAGCCGA
CATGGTGGTGGACGGTGACGGAGATGTGAACATGGGTGGCCGACCGGATT
CGCAGGACCAGGAACCAGCACCAGCACCAGCACCAGCACCGGTGGCGCCG
ACCTTCACCTTAACCACCGGCCACAGCGTTGGCGTCCAGATCACCCCCGC
CAAGGCCGCCGACCTTGGGCCCAACACCGCCATCCTCGATCTGGCTAGTG
ATGATCACGTGACCCGCACCCTCTGGCGCCCTCGCGACCCTACTACCGTC
GTGGCCGCTGGCGATACCTTCTGCAGCCTGTGGAGGCTGTCTTCAACCTC
GGATCCGGTACAAGAGAAACTCGTAGCGAACAAAGGGGATAGCACCTGTG
TTTCGGCGGTCGCCTGGGACCCATTGGGTCAGAAGCTGGCCGTCGCGACC
TACAATGACATGAGAGGCTCCATCACCATGTATGACGTGTCTGGAAATGC
CGTCGATCTTCTTCCCGAAGTACCGCGGATGATTACTGGGTTGCACTGGG
CGGAAAGCGGGTCCCATCTGATCGTGGTTGCTTCAGACAGCAGAATCTCC
GAGCTAGCGCTCTGGGACGACTCATTACGACCAGACGAATTCCCATCGCC
TCAGGTTATCGAGGGATCAGTCTTCGATCTTTGCTGGTTGGGCTCCAACC
AGGCTTTTGCTTGCGGTAACGGGACGGTCTATCAATGCGATGTCGATTCG
AGTATTCACATCGCCAAGACGTTCTCATCTGGCGACTCTGATCAGCCCTG
GTCATTTATCCGCTGTGCTAATGCCGGCTCTTCATCCGTGGCGGTAGCTG
CATCTTCCGCCAATGCTACACTATGGGTGCCTACCCATGATATGCGCCAT
GAGGGTGCCCATGAAGGGGATATCACGGCCATTGAGCTAAAGCCCAATAT
GGAACAACAACAGGAGCAGCAGCAGCAAATAGCACAACCACTTGTTTTGG
CCACTTCTGCCACCGATGACACGGTCAAGGTATGGCATTTGGATCTGGAG
TCCAAACAGTTCAATTGTATTCACCGATTGTTTCTCGGCCCATCGGCACC
CGCTCTTGCTAGCACTTTCTCTCCCGACGGATACGCCCTTGCCGCTGCCA
GTAAAGAGAGTCTTTTCATTTGGAATGCACAACGTGGAGGCACTGCGCTG
GCTACCTGGAGAGTGCCGGGTCCCGAAGAGCAGAAAAAGGAGGAGTCTAG
TCCCATGGTGAATGGGCACAATGGCACTGCGGAGTCGGTGCCGGATCGCA
GTCTAGCGTGGGATACCGATGGCAAGAAGCTTGCTTTCGGTTATGGAAAC
CAGGTATGTCGTCCTTGCGGTGCCGTGTGGGACATTGTCACTGATTTATT
CGAACAGCTAGCCATCGTAAATCTGCAGCGCTGA back to topCoding sequence (CDS) from alignment at An06:449978..452211- >CBS51388_004097-T1 ID=CBS51388_004097-T1|Name=CBS51388_004097-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7848bp|location=Sequence derived from alignment at An06:449978..452211- (Aspergillus niger CBS 513.88)
GATGGAAATCCTACGGCCTTCACATCGTCTGACTACTTTTTCGGGCCTAC
GCCGCTGGAACCCGAAACTGAAAAGGGTCAAAGTGGCCCCGGGGAGGCAG
GCGTTGGCACAGACCAGGCGCCTGTCTCGCCCACAAGCAAAGTTCCGCGA
GATGGCGGCGTGATTAACGGTCACTTGACGGCCGAGGCGGCGGCGGCACC
CCAAGCACCAGCACCAGCACCACCTCAAGCTCCCACCAGTGTGAAGAAGC
CGCATAAGAATGGAGAGGCCAACGGTGATGAAACTCCCATGGAAATTGAC
ACTAACGGAGTAACGACTGAAAGCAAACCCGAAGTAGTCGATGAGTCGCC
TCGAACAGCCGACATGGTGGTGGACGGTGACGGAGATGTGAACATGGGTG
GCCGACCGGATTCGCAGGACCAGGAACCAGCACCAGCACCAGCACCAGCA
CCGGTGGCGCCGACCTTCACCTTAACCACCGGCCACAGCGTTGGCGTCCA
GATCACCCCCGCCAAGGCCGCCGACCTTGGGCCCAACACCGCCATCCTCG
ATCTGGCTAGTGATGATCACGTGACCCGCACCCTCTGGCGCCCTCGCGAC
CCTACTACCGTCGTGGCCGCTGGCGATACCTTCTGCAGCCTGTGGAGGCT
GTCTTCAACCTCGGATCCGGTACAAGAGAAACTCGTAGCGAACAAAGGGG
ATAGCACCTGTGTTTCGGCGGTCGCCTGGGACCCATTGGGTCAGAAGCTG
GCCGTCGCGACCTACAATGACATGAGAGGCTCCATCACCATGTATGACGT
GTCTGGAAATGCCGTCGATCTTCTTCCCGAAGTACCGCGGATGATTACTG
GGTTGCACTGGGCGGAAAGCGGGTCCCATCTGATCGTGGTTGCTTCAGAC
AGCAGAATCTCCGAGCTAGCGCTCTGGGACGACTCATTACGACCAGACGA
ATTCCCATCGCCTCAGGTTATCGAGGGATCAGTCTTCGATCTTTGCTGGT
TGGGCTCCAACCAGGCTTTTGCTTGCGGTAACGGGACGGTCTATCAATGC
GATGTCGATTCGAGTATTCACATCGCCAAGACGTTCTCATCTGGCGACTC
TGATCAGCCCTGGTCATTTATCCGCTGTGCTAATGCCGGCTCTTCATCCG
TGGCGGTAGCTGCATCTTCCGCCAATGCTACACTATGGGTGCCTACCCAT
GATATGCGCCATGAGGGTGCCCATGAAGGGGATATCACGGCCATTGAGCT
AAAGCCCAATATGGAACAACAACAGGAGCAGCAGCAGCAAATAGCACAAC
CACTTGTTTTGGCCACTTCTGCCACCGATGACACGGTCAAGGTATGGCAT
TTGGATCTGGAGTCCAAACAGTTCAATTGTATTCACCGATTGTTTCTCGG
CCCATCGGCACCCGCTCTTGCTAGCACTTTCTCTCCCGACGGATACGCCC
TTGCCGCTGCCAGTAAAGAGAGTCTTTTCATTTGGAATGCACAACGTGGA
GGCACTGCGCTGGCTACCTGGAGAGTGCCGGGTCCCGAAGAGCAGAAAAA
GGAGGAGTCTAGTCCCATGGTGAATGGGCACAATGGCACTGCGGAGTCGG
TGCCGGATCGCAGTCTAGCGTGGGATACCGATGGCAAGAAGCTTGCTTTC
GGTTATGGAAACCAGGTATGTCGTCCTTGCGGTGCCGTGTGGGACATTGT
CACTGATTTATTCGAACAGCTAGCCATCGTAAATCTGCAGCGCTGAGGCA
TGGCGAGGCTGCACTCACCTTACAGCGCGCGTGGAATCAAGACCCGCAGA
GTTTGCCGTTTGCCCCATACATCAAAACTCATGCTCTGGTATCCTTGGTG
CAAAAGGGCCTGCAGTATCATGAACTAGAGCATTCCCTCGACAGGGTATC
TTCAAGAATCTGATGGCACAACCCGATCTCACATCGCATCACGTCAATTA
CCTAATATGGAGGATGGAAATCCTACGGCCTTCACATCGTCTGACTACTT
TTTCGGGCCTACGCCGCTGGAACCCGAAACTGAAAAGGGTCAAAGTGGCC
CCGGGGAGGCAGGCGTTGGCACAGACCAGGCGCCTGTCTCGCCCACAAGC
AAAGTTCCGCGAGATGGCGGCGTGATTAACGGTCACTTGACGGCCGAGGC
GGCGGCGGCACCCCAAGCACCAGCACCAGCACCACCTCAAGCTCCCACCA
GTGTGAAGAAGCCGCATAAGAATGGAGAGGCCAACGGTGATGAAACTCCC
ATGGAAATTGACACTAACGGAGTAACGACTGAAAGCAAACCCGAAGTAGT
CGATGAGTCGCCTCGAACAGCCGACATGGTGGTGGACGGTGACGGAGATG
TGAACATGGGTGGCCGACCGGATTCGCAGGACCAGGAACCAGCACCAGCA
CCAGCACCAGCACCGGTGGCGCCGACCTTCACCTTAACCACCGGCCACAG
CGTTGGCGTCCAGATCACCCCCGCCAAGGCCGCCGACCTTGGGCCCAACA
CCGCCATCCTCGATCTGGCTAGTGATGATCACGTGACCCGCACCCTCTGG
CGCCCTCGCGACCCTACTACCGTCGTGGCCGCTGGCGATACCTTCTGCAG
CCTGTGGAGGCTGTCTTCAACCTCGGATCCGGTACAAGAGAAACTCGTAG
CGAACAAAGGGGATAGCACCTGTGTTTCGGCGGTCGCCTGGGACCCATTG
GGTCAGAAGCTGGCCGTCGCGACCTACAATGACATGAGAGGCTCCATCAC
CATGTATGACGTGTCTGGAAATGCCGTCGATCTTCTTCCCGAAGTACCGC
GGATGATTACTGGGTTGCACTGGGCGGAAAGCGGGTCCCATCTGATCGTG
GTTGCTTCAGACAGCAGAATCTCCGAGCTAGCGCTCTGGGACGACTCATT
ACGACCAGACGAATTCCCATCGCCTCAGGTTATCGAGGGATCAGTCTTCG
ATCTTTGCTGGTTGGGCTCCAACCAGGCTTTTGCTTGCGGTAACGGGACG
GTCTATCAATGCGATGTCGATTCGAGTATTCACATCGCCAAGACGTTCTC
ATCTGGCGACTCTGATCAGCCCTGGTCATTTATCCGCTGTGCTAATGCCG
GCTCTTCATCCGTGGCGGTAGCTGCATCTTCCGCCAATGCTACACTATGG
GTGCCTACCCATGATATGCGCCATGAGGGTGCCCATGAAGGGGATATCAC
GGCCATTGAGCTAAAGCCCAATATGGAACAACAACAGGAGCAGCAGCAGC
AAATAGCACAACCACTTGTTTTGGCCACTTCTGCCACCGATGACACGGTC
AAGGTATGGCATTTGGATCTGGAGTCCAAACAGTTCAATTGTATTCACCG
ATTGTTTCTCGGCCCATCGGCACCCGCTCTTGCTAGCACTTTCTCTCCCG
ACGGATACGCCCTTGCCGCTGCCAGTAAAGAGAGTCTTTTCATTTGGAAT
GCACAACGTGGAGGCACTGCGCTGGCTACCTGGAGAGTGCCGGGTCCCGA
AGAGCAGAAAAAGGAGGAGTCTAGTCCCATGGTGAATGGGCACAATGGCA
CTGCGGAGTCGGTGCCGGATCGCAGTCTAGCGTGGGATACCGATGGCAAG
AAGCTTGCTTTCGGTTATGGAAACCAGGTATGTCGTCCTTGCGGTGCCGT
GTGGGACATTGTCACTGATTTATTCGAACAGCTAGCCATCGTAAATCTGC
AGCGCTGAGGCATGGCGAGGCTGCACTCACCTTACAGCGCGCGTGGAATC
AAGACCCGCAGAGTTTGCCGTTTGCCCCATACATCAAAACTCATGCTCTG
GTATCCTTGGTGCAAAAGGGCCTGCAGTATCATGAACTAGAGCATTCCCT
CGACAGGGTATCTTCAAGAATCTGATGGCACAACCCGATCTCACATCGCA
TCACGTCAATTACCTAATATGGAGGATGGAAATCCTACGGCCTTCACATC
GTCTGACTACTTTTTCGGGCCTACGCCGCTGGAACCCGAAACTGAAAAGG
GTCAAAGTGGCCCCGGGGAGGCAGGCGTTGGCACAGACCAGGCGCCTGTC
TCGCCCACAAGCAAAGTTCCGCGAGATGGCGGCGTGATTAACGGTCACTT
GACGGCCGAGGCGGCGGCGGCACCCCAAGCACCAGCACCAGCACCACCTC
AAGCTCCCACCAGTGTGAAGAAGCCGCATAAGAATGGAGAGGCCAACGGT
GATGAAACTCCCATGGAAATTGACACTAACGGAGTAACGACTGAAAGCAA
ACCCGAAGTAGTCGATGAGTCGCCTCGAACAGCCGACATGGTGGTGGACG
GTGACGGAGATGTGAACATGGGTGGCCGACCGGATTCGCAGGACCAGGAA
CCAGCACCAGCACCAGCACCAGCACCGGTGGCGCCGACCTTCACCTTAAC
CACCGGCCACAGCGTTGGCGTCCAGATCACCCCCGCCAAGGCCGCCGACC
TTGGGCCCAACACCGCCATCCTCGATCTGGCTAGTGATGATCACGTGACC
CGCACCCTCTGGCGCCCTCGCGACCCTACTACCGTCGTGGCCGCTGGCGA
TACCTTCTGCAGCCTGTGGAGGCTGTCTTCAACCTCGGATCCGGTACAAG
AGAAACTCGTAGCGAACAAAGGGGATAGCACCTGTGTTTCGGCGGTCGCC
TGGGACCCATTGGGTCAGAAGCTGGCCGTCGCGACCTACAATGACATGAG
AGGCTCCATCACCATGTATGACGTGTCTGGAAATGCCGTCGATCTTCTTC
CCGAAGTACCGCGGATGATTACTGGGTTGCACTGGGCGGAAAGCGGGTCC
CATCTGATCGTGGTTGCTTCAGACAGCAGAATCTCCGAGCTAGCGCTCTG
GGACGACTCATTACGACCAGACGAATTCCCATCGCCTCAGGTTATCGAGG
GATCAGTCTTCGATCTTTGCTGGTTGGGCTCCAACCAGGCTTTTGCTTGC
GGTAACGGGACGGTCTATCAATGCGATGTCGATTCGAGTATTCACATCGC
CAAGACGTTCTCATCTGGCGACTCTGATCAGCCCTGGTCATTTATCCGCT
GTGCTAATGCCGGCTCTTCATCCGTGGCGGTAGCTGCATCTTCCGCCAAT
GCTACACTATGGGTGCCTACCCATGATATGCGCCATGAGGGTGCCCATGA
AGGGGATATCACGGCCATTGAGCTAAAGCCCAATATGGAACAACAACAGG
AGCAGCAGCAGCAAATAGCACAACCACTTGTTTTGGCCACTTCTGCCACC
GATGACACGGTCAAGGTATGGCATTTGGATCTGGAGTCCAAACAGTTCAA
TTGTATTCACCGATTGTTTCTCGGCCCATCGGCACCCGCTCTTGCTAGCA
CTTTCTCTCCCGACGGATACGCCCTTGCCGCTGCCAGTAAAGAGAGTCTT
TTCATTTGGAATGCACAACGTGGAGGCACTGCGCTGGCTACCTGGAGAGT
GCCGGGTCCCGAAGAGCAGAAAAAGGAGGAGTCTAGTCCCATGGTGAATG
GGCACAATGGCACTGCGGAGTCGGTGCCGGATCGCAGTCTAGCGTGGGAT
ACCGATGGCAAGAAGCTTGCTTTCGGTTATGGAAACCAGGTATGTCGTCC
TTGCGGTGCCGTGTGGGACATTGTCACTGATTTATTCGAACAGCTAGCCA
TCGTAAATCTGCAGCGCTGAGGCATGGCGAGGCTGCACTCACCTTACAGC
GCGCGTGGAATCAAGACCCGCAGAGTTTGCCGTTTGCCCCATACATCAAA
ACTCATGCTCTGGTATCCTTGGTGCAAAAGGGCCTGCAGTATCATGAACT
AGAGCATTCCCTCGACAGGGTATCTTCAAGAATCTGATGGCACAACCCGA
TCTCACATCGCATCACGTCAATTACCTAATATGGAGGATGGAAATCCTAC
GGCCTTCACATCGTCTGACTACTTTTTCGGGCCTACGCCGCTGGAACCCG
AAACTGAAAAGGGTCAAAGTGGCCCCGGGGAGGCAGGCGTTGGCACAGAC
CAGGCGCCTGTCTCGCCCACAAGCAAAGTTCCGCGAGATGGCGGCGTGAT
TAACGGTCACTTGACGGCCGAGGCGGCGGCGGCACCCCAAGCACCAGCAC
CAGCACCACCTCAAGCTCCCACCAGTGTGAAGAAGCCGCATAAGAATGGA
GAGGCCAACGGTGATGAAACTCCCATGGAAATTGACACTAACGGAGTAAC
GACTGAAAGCAAACCCGAAGTAGTCGATGAGTCGCCTCGAACAGCCGACA
TGGTGGTGGACGGTGACGGAGATGTGAACATGGGTGGCCGACCGGATTCG
CAGGACCAGGAACCAGCACCAGCACCAGCACCAGCACCGGTGGCGCCGAC
CTTCACCTTAACCACCGGCCACAGCGTTGGCGTCCAGATCACCCCCGCCA
AGGCCGCCGACCTTGGGCCCAACACCGCCATCCTCGATCTGGCTAGTGAT
GATCACGTGACCCGCACCCTCTGGCGCCCTCGCGACCCTACTACCGTCGT
GGCCGCTGGCGATACCTTCTGCAGCCTGTGGAGGCTGTCTTCAACCTCGG
ATCCGGTACAAGAGAAACTCGTAGCGAACAAAGGGGATAGCACCTGTGTT
TCGGCGGTCGCCTGGGACCCATTGGGTCAGAAGCTGGCCGTCGCGACCTA
CAATGACATGAGAGGCTCCATCACCATGTATGACGTGTCTGGAAATGCCG
TCGATCTTCTTCCCGAAGTACCGCGGATGATTACTGGGTTGCACTGGGCG
GAAAGCGGGTCCCATCTGATCGTGGTTGCTTCAGACAGCAGAATCTCCGA
GCTAGCGCTCTGGGACGACTCATTACGACCAGACGAATTCCCATCGCCTC
AGGTTATCGAGGGATCAGTCTTCGATCTTTGCTGGTTGGGCTCCAACCAG
GCTTTTGCTTGCGGTAACGGGACGGTCTATCAATGCGATGTCGATTCGAG
TATTCACATCGCCAAGACGTTCTCATCTGGCGACTCTGATCAGCCCTGGT
CATTTATCCGCTGTGCTAATGCCGGCTCTTCATCCGTGGCGGTAGCTGCA
TCTTCCGCCAATGCTACACTATGGGTGCCTACCCATGATATGCGCCATGA
GGGTGCCCATGAAGGGGATATCACGGCCATTGAGCTAAAGCCCAATATGG
AACAACAACAGGAGCAGCAGCAGCAAATAGCACAACCACTTGTTTTGGCC
ACTTCTGCCACCGATGACACGGTCAAGGTATGGCATTTGGATCTGGAGTC
CAAACAGTTCAATTGTATTCACCGATTGTTTCTCGGCCCATCGGCACCCG
CTCTTGCTAGCACTTTCTCTCCCGACGGATACGCCCTTGCCGCTGCCAGT
AAAGAGAGTCTTTTCATTTGGAATGCACAACGTGGAGGCACTGCGCTGGC
TACCTGGAGAGTGCCGGGTCCCGAAGAGCAGAAAAAGGAGGAGTCTAGTC
CCATGGTGAATGGGCACAATGGCACTGCGGAGTCGGTGCCGGATCGCAGT
CTAGCGTGGGATACCGATGGCAAGAAGCTTGCTTTCGGTTATGGAAACCA
GGTATGTCGTCCTTGCGGTGCCGTGTGGGACATTGTCACTGATTTATTCG
AACAGCTAGCCATCGTAAATCTGCAGCGCTGAGGCATGGCGAGGCTGCAC
TCACCTTACAGCGCGCGTGGAATCAAGACCCGCAGAGTTTGCCGTTTGCC
CCATACATCAAAACTCATGCTCTGGTATCCTTGGTGCAAAAGGGCCTGCA
GTATCATGAACTAGAGCATTCCCTCGACAGGGTATCTTCAAGAATCTGAT
GGCACAACCCGATCTCACATCGCATCACGTCAATTACCTAATATGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR006594 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF08513 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:449978..452211 - |
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