|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An06:476461..477509+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004108-T1 ID=CBS51388_004108-T1|Name=CBS51388_004108-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1049bp|location=Sequence derived from alignment at An06:476461..477509+ (Aspergillus niger CBS 513.88)
ATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACC
CACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATG
GTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAAT
GCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGA
GGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCA
GTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGT
GTGGACTTTCCGGAGGTAATTGCGACGGTGAATAATGTCTGTCTTCCCTC
TATAAGCTGACGATCGGTTACAGGCGCCCATTCCCGAATCTTTTCGGAGA
GCCAAGCAAGCAGAGGCACAGAATGGTATGGTCACAGCTGCGCGAAAGGG
AGATCCAACTACTAATAGCACGCATAGAGGCAGAAGCAGAACAGCTGAAA
GCGACCACTGAAGCGGAGATGACATTCATGTGAGATCTGGTTACTCCCCG
GGCCAGTTGTTTCATGCTTTTTTGCATCATACTAACGACATGACGTACTT
AGGACTACGGATACTTCCTTCATCGAACATCCTCCAAGCACCGTCTCCTC
CAAGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACCACCAGAGGAT
CTACGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGGCACCAATCGT
GGCGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTACGGTGAAGGCA
GGAACCCGGATGGTAGAAATTTTGAACAGGGCGCAGACGGTTGAGCCTGA
AGAGGCACAAAGACTTGCGCGAAGGGAACGGTTTGCTATTGGCAATCCGT
GGAGAATCCCTGCAATTCGCAACGCGCTCCCAAACCTTGAAAGGAACCCC
GTTCCTGAAAGAACATACGGCGATGATTGTCGTAACACAAAGCCTGCCGA
GCGGCCTGTCCGATCTCAGCGGCTCGGATCTTTCTTGAGGAAATTCTAG back to topCoding sequence (CDS) from alignment at An06:476461..477509+ >CBS51388_004108-T1 ID=CBS51388_004108-T1|Name=CBS51388_004108-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1524bp|location=Sequence derived from alignment at An06:476461..477509+ (Aspergillus niger CBS 513.88)
ATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACC
CACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATG
GTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAAT
GCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGA
GGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCA
GTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGT
GTGGACTTTCCGGAGGACTACGGATACTTCCTTCATCGAACATCCTCCAA
GCACCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGC
ACCACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCGCTATGCGACACG
GGGCACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGAT
TACGGTGAAGGCAGGAACCCGGATGGTAGAAATTTTGAACAGGGCGCAGA
CGGTTGAGCCTGAAGAGGCACAAAGACTTGCGCGAAGGGAACGGTTTGCT
ATTGGCAATCCGTGGAGAATCCCTGCAATTCGCAACGCGCTCCCAAACCT
TGAAAGGAACCCCGTTCCTGAAAGAACATACGGCGATGATTGTCGTAACA
CAAAGCCTGCCGAGCGGCCTGTCCGATCTCAGCGGCTCGGATCTTTCTTG
AGGAAATTCTAGATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCC
CTCATCGCGACCCACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCC
GTGAAGCTCATGGTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAG
CCTGCCATCAATGCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCAT
GGCCGACCTCGAGGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTT
TGACCCGGTTCAGTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATG
AATGCGTTCTGTGTGGACTTTCCGGAGGACTACGGATACTTCCTTCATCG
AACATCCTCCAAGCACCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCC
CCGTCGCGTGGCACCACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCG
CTATGCGACACGGGGCACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCC
GCGGACGAGGATTACGGTGAAGGCAGGAACCCGGATGGTAGAAATTTTGA
ACAGGGCGCAGACGGTTGAGCCTGAAGAGGCACAAAGACTTGCGCGAAGG
GAACGGTTTGCTATTGGCAATCCGTGGAGAATCCCTGCAATTCGCAACGC
GCTCCCAAACCTTGAAAGGAACCCCGTTCCTGAAAGAACATACGGCGATG
ATTGTCGTAACACAAAGCCTGCCGAGCGGCCTGTCCGATCTCAGCGGCTC
GGATCTTTCTTGAGGAAATTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042729 | DASH complex |
| GO:0072686 | mitotic spindle |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008608 | attachment of spindle microtubules to kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265J36 |
| DBxref | InterPro:IPR013962 |
| DBxref | PFAM:PF08653 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An06 | supercontig | An06:476461..477509 + |
|
