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CBS51388_004177-T1, CBS51388_004177-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004177-T1
Unique NameCBS51388_004177-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:10275..12088+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004177-T1 ID=CBS51388_004177-T1|Name=CBS51388_004177-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1814bp|location=Sequence derived from alignment at An07:10275..12088+ (Aspergillus niger CBS 513.88)
ATGTCGAGTGAGAAGCAAACCGCCCCGAATGCTCCCTCCCCTCCAGCACC
ACCGCCACCGTCAGATCCTCCGCGGCGAGATTGGCGCTTTTGGGCCATTT
TCCCTCCGCTATGCGTGGCTACATTACTGTCAGCGCTAGAATCTACGGTC
GTGTCGACGGCCCTGCCCTCCATTGTGGATGATCTCCACTCGGGAAATCT
GTACATCTGGTTTGTCAATGGCTACTTCTTAACTTTGTAAGTGTCCCCTT
TCCCCTCCCCCTATGAACTGCTGCTGGACATCTCATCCTGAACGCGATCT
CACACACACTCACACACAGCACCGCTTTCCAACCGCTGTATGGCCAGTTG
GCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATCGGGGCCGTGGCAATATT
TGCATTGGGCAGTGGCATCAGCGGCGGTGCCAGCAGCTCAGCCATGCTGC
TGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCGGCGGCATCAGTCTCATG
ACACAGTTGGTCATTAGTGACCTGGTGTCGGTGCGTGAACGAGGCAAGTT
CATGGCCATCATCTTCACCACCTTCTCGCTGGGGACCTCGCTGGGCCCGT
TTATTGGGGGCGCGCTGGTCGACAACACCACCTGGCGCTGGGTGTTCTAC
ATCAACTTACCCATCGCCGGCGCCGCCCTCGTCTTGCTGTACTTCTTTCT
GCAGGTCCATTTCCAGCGGCGACTCACGGTGCGACAGAAGATGAGCCGCA
TCGACTTCGTGGGTAATGCCATTCTGATTGCCTCGGTCACCTCCGTCCTC
ATTGCCCTCTCCTGGGGCGGATCCCGGTATAGCTGGCGCTCCTGGCATGT
GCTGGTTCCCCTCTTGGTCGGATTTGCGGGCACGGGCTTCTTTCACTTCT
ACGAAAGTACCCGCTTCTGCAAGGAGCCCACGTTGCCGACACGTATCCTC
GCCAATAACCGGACCACCTCCATTGTTCTCTTCTGTTCATTCTGCCAGTT
TCTGCTGTCCTTCTGGACCATCTACTTCCTGCCCATCTACTTCCAGGGCG
TCCTCCTCGTCTCCCCCGAGCGCAGTGGCGTCTTACTCCTCCCGTTTGTC
ATTACCAGTCTACCCATCGCCATGCTCTTTGGCAATCTGCTCACCCGTTG
GGGCCGGTACAAGCCCATCCACATTGTGGCTTTCATGCTGATCACCCTGG
GCACCGGGCTGTTCATCCGCCTGGATCAGCACTCGTCCATGGCGGAGTAT
GTCATCTTCCAGATCATCACCGCTGTGGGCACGGGGATGATCATGTCGAC
CTTGCTGCCCGCCGTGCAGGCCCCATTGCAGGACACTCAGGTGGCCCCCG
CGACGGCGACTTGGGGCTTCTTGCGAGCGTACGGCGGCGTCTGGGGGGTG
GCCATCCCGGGCGCGATCTTCAACTCCCAGATCCAGACCAATCTGAGCAA
GCGCGTGAGTGATCCGGATGTGCGACGCACCCTGGGGAGTGGATCGGCCT
ACTCGCATGTCTCAAGCTCCTACATTCGCTCCCTGCCCGCCGACGTCCGC
GATGATGTGGTCAGCGTCTATGTCGACGCCCTCCGCATTGTGTGGGCCAC
CGCCACGGCGTTTGCTGGACTGTGCTTCCTGCTCACCTTGCTGGAGAAGG
AGGTCCCCTTGCGCACCTCGGTGAAATCAGACTACGGGATGCGTCGTCGT
GAGCAGGAGAAGACGACCGCAGGGGATAGCAATGGGAATGCGGAGTCCAG
CCAGTCCAACTCGAGCCCGGACGCCTCGTCTACACCGCGCCCTGCTGACC
CGCATTCATCATAG
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Coding sequence (CDS) from alignment at An07:10275..12088+

>CBS51388_004177-T1 ID=CBS51388_004177-T1|Name=CBS51388_004177-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3462bp|location=Sequence derived from alignment at An07:10275..12088+ (Aspergillus niger CBS 513.88)
ATGTCGAGTGAGAAGCAAACCGCCCCGAATGCTCCCTCCCCTCCAGCACC
ACCGCCACCGTCAGATCCTCCGCGGCGAGATTGGCGCTTTTGGGCCATTT
TCCCTCCGCTATGCGTGGCTACATTACTGTCAGCGCTAGAATCTACGGTC
GTGTCGACGGCCCTGCCCTCCATTGTGGATGATCTCCACTCGGGAAATCT
GTACATCTGGTTTGTCAATGGCTACTTCTTAACTTTCACCGCTTTCCAAC
CGCTGTATGGCCAGTTGGCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATC
GGGGCCGTGGCAATATTTGCATTGGGCAGTGGCATCAGCGGCGGTGCCAG
CAGCTCAGCCATGCTGCTGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCG
GCGGCATCAGTCTCATGACACAGTTGGTCATTAGTGACCTGGTGTCGGTG
CGTGAACGAGGCAAGTTCATGGCCATCATCTTCACCACCTTCTCGCTGGG
GACCTCGCTGGGCCCGTTTATTGGGGGCGCGCTGGTCGACAACACCACCT
GGCGCTGGGTGTTCTACATCAACTTACCCATCGCCGGCGCCGCCCTCGTC
TTGCTGTACTTCTTTCTGCAGGTCCATTTCCAGCGGCGACTCACGGTGCG
ACAGAAGATGAGCCGCATCGACTTCGTGGGTAATGCCATTCTGATTGCCT
CGGTCACCTCCGTCCTCATTGCCCTCTCCTGGGGCGGATCCCGGTATAGC
TGGCGCTCCTGGCATGTGCTGGTTCCCCTCTTGGTCGGATTTGCGGGCAC
GGGCTTCTTTCACTTCTACGAAAGTACCCGCTTCTGCAAGGAGCCCACGT
TGCCGACACGTATCCTCGCCAATAACCGGACCACCTCCATTGTTCTCTTC
TGTTCATTCTGCCAGTTTCTGCTGTCCTTCTGGACCATCTACTTCCTGCC
CATCTACTTCCAGGGCGTCCTCCTCGTCTCCCCCGAGCGCAGTGGCGTCT
TACTCCTCCCGTTTGTCATTACCAGTCTACCCATCGCCATGCTCTTTGGC
AATCTGCTCACCCGTTGGGGCCGGTACAAGCCCATCCACATTGTGGCTTT
CATGCTGATCACCCTGGGCACCGGGCTGTTCATCCGCCTGGATCAGCACT
CGTCCATGGCGGAGTATGTCATCTTCCAGATCATCACCGCTGTGGGCACG
GGGATGATCATGTCGACCTTGCTGCCCGCCGTGCAGGCCCCATTGCAGGA
CACTCAGGTGGCCCCCGCGACGGCGACTTGGGGCTTCTTGCGAGCGTACG
GCGGCGTCTGGGGGGTGGCCATCCCGGGCGCGATCTTCAACTCCCAGATC
CAGACCAATCTGAGCAAGCGCGTGAGTGATCCGGATGTGCGACGCACCCT
GGGGAGTGGATCGGCCTACTCGCATGTCTCAAGCTCCTACATTCGCTCCC
TGCCCGCCGACGTCCGCGATGATGTGGTCAGCGTCTATGTCGACGCCCTC
CGCATTGTGTGGGCCACCGCCACGGCGTTTGCTGGACTGTGCTTCCTGCT
CACCTTGCTGGAGAAGGAGGTCCCCTTGCGCACCTCGGTGAAATCAGACT
ACGGGATGCGTCGTCGTGAGCAGGAGAAGACGACCGCAGGGGATAGCAAT
GGGAATGCGGAGTCCAGCCAGTCCAACTCGAGCCCGGACGCCTCGTCTAC
ACCGCGCCCTGCTGACCCGCATTCATCATAGATGTCGAGTGAGAAGCAAA
CCGCCCCGAATGCTCCCTCCCCTCCAGCACCACCGCCACCGTCAGATCCT
CCGCGGCGAGATTGGCGCTTTTGGGCCATTTTCCCTCCGCTATGCGTGGC
TACATTACTGTCAGCGCTAGAATCTACGGTCGTGTCGACGGCCCTGCCCT
CCATTGTGGATGATCTCCACTCGGGAAATCTGTACATCTGGTTTGTCAAT
GGCTACTTCTTAACTTTCACCGCTTTCCAACCGCTGTATGGCCAGTTGGC
CCAAGTGTTCGGCCGGCGCTGGCTGCTGATCGGGGCCGTGGCAATATTTG
CATTGGGCAGTGGCATCAGCGGCGGTGCCAGCAGCTCAGCCATGCTGCTG
GTTGGTCGAGTCCTTCAAGGCGCAGGTGGCGGCGGCATCAGTCTCATGAC
ACAGTTGGTCATTAGTGACCTGGTGTCGGTGCGTGAACGAGGCAAGTTCA
TGGCCATCATCTTCACCACCTTCTCGCTGGGGACCTCGCTGGGCCCGTTT
ATTGGGGGCGCGCTGGTCGACAACACCACCTGGCGCTGGGTGTTCTACAT
CAACTTACCCATCGCCGGCGCCGCCCTCGTCTTGCTGTACTTCTTTCTGC
AGGTCCATTTCCAGCGGCGACTCACGGTGCGACAGAAGATGAGCCGCATC
GACTTCGTGGGTAATGCCATTCTGATTGCCTCGGTCACCTCCGTCCTCAT
TGCCCTCTCCTGGGGCGGATCCCGGTATAGCTGGCGCTCCTGGCATGTGC
TGGTTCCCCTCTTGGTCGGATTTGCGGGCACGGGCTTCTTTCACTTCTAC
GAAAGTACCCGCTTCTGCAAGGAGCCCACGTTGCCGACACGTATCCTCGC
CAATAACCGGACCACCTCCATTGTTCTCTTCTGTTCATTCTGCCAGTTTC
TGCTGTCCTTCTGGACCATCTACTTCCTGCCCATCTACTTCCAGGGCGTC
CTCCTCGTCTCCCCCGAGCGCAGTGGCGTCTTACTCCTCCCGTTTGTCAT
TACCAGTCTACCCATCGCCATGCTCTTTGGCAATCTGCTCACCCGTTGGG
GCCGGTACAAGCCCATCCACATTGTGGCTTTCATGCTGATCACCCTGGGC
ACCGGGCTGTTCATCCGCCTGGATCAGCACTCGTCCATGGCGGAGTATGT
CATCTTCCAGATCATCACCGCTGTGGGCACGGGGATGATCATGTCGACCT
TGCTGCCCGCCGTGCAGGCCCCATTGCAGGACACTCAGGTGGCCCCCGCG
ACGGCGACTTGGGGCTTCTTGCGAGCGTACGGCGGCGTCTGGGGGGTGGC
CATCCCGGGCGCGATCTTCAACTCCCAGATCCAGACCAATCTGAGCAAGC
GCGTGAGTGATCCGGATGTGCGACGCACCCTGGGGAGTGGATCGGCCTAC
TCGCATGTCTCAAGCTCCTACATTCGCTCCCTGCCCGCCGACGTCCGCGA
TGATGTGGTCAGCGTCTATGTCGACGCCCTCCGCATTGTGTGGGCCACCG
CCACGGCGTTTGCTGGACTGTGCTTCCTGCTCACCTTGCTGGAGAAGGAG
GTCCCCTTGCGCACCTCGGTGAAATCAGACTACGGGATGCGTCGTCGTGA
GCAGGAGAAGACGACCGCAGGGGATAGCAATGGGAATGCGGAGTCCAGCC
AGTCCAACTCGAGCCCGGACGCCTCGTCTACACCGCGCCCTGCTGACCCG
CATTCATCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004177CBS51388_004177Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004177-T1.exon1CBS51388_004177-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004177-T1.exon2CBS51388_004177-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004177-T1.cdsCBS51388_004177-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004177-T1CBS51388_004177-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:10275..12088 +
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