You are here

CBS51388_004246-T1, CBS51388_004246-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004246-T1
Unique NameCBS51388_004246-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:187167..187478+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004246-T1 ID=CBS51388_004246-T1|Name=CBS51388_004246-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=312bp|location=Sequence derived from alignment at An07:187167..187478+ (Aspergillus niger CBS 513.88)
ATGAGATTCACCCCCATTATCCTGGCCATGGCCACAGTGGCAGTGGCGAT CCCTCTAAACCACGATGTCAGTACTCTGCATGGAGTGCACTCTGTTGAAC TGTTTATTGATTCTTTTGAATAGATGAACGTAAATCGTGAGGAAGCCTTT GCTGAAGCAGCAGAGTACAACCCTACACTTGAGCCGCATTCGAAGCGTCA AGAAGGCTATCCTCCTGCCTTCGAGGTCCATCCTTCAAAGCGTCAGGAAG GCTATCCTCCTGCTTTTGAAGTTCAGCCTTCCGAGCGCGAAGATGTTGAA AGGGACGCATAG
back to top

Coding sequence (CDS) from alignment at An07:187167..187478+

>CBS51388_004246-T1 ID=CBS51388_004246-T1|Name=CBS51388_004246-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=510bp|location=Sequence derived from alignment at An07:187167..187478+ (Aspergillus niger CBS 513.88)
ATGAGATTCACCCCCATTATCCTGGCCATGGCCACAGTGGCAGTGGCGAT
CCCTCTAAACCACGATATGAACGTAAATCGTGAGGAAGCCTTTGCTGAAG
CAGCAGAGTACAACCCTACACTTGAGCCGCATTCGAAGCGTCAAGAAGGC
TATCCTCCTGCCTTCGAGGTCCATCCTTCAAAGCGTCAGGAAGGCTATCC
TCCTGCTTTTGAAGTTCAGCCTTCCGAGCGCGAAGATGTTGAAAGGGACG
CATAGATGAGATTCACCCCCATTATCCTGGCCATGGCCACAGTGGCAGTG
GCGATCCCTCTAAACCACGATATGAACGTAAATCGTGAGGAAGCCTTTGC
TGAAGCAGCAGAGTACAACCCTACACTTGAGCCGCATTCGAAGCGTCAAG
AAGGCTATCCTCCTGCCTTCGAGGTCCATCCTTCAAAGCGTCAGGAAGGC
TATCCTCCTGCTTTTGAAGTTCAGCCTTCCGAGCGCGAAGATGTTGAAAG
GGACGCATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004246CBS51388_004246Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004246-T1.exon1CBS51388_004246-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004246-T1.exon2CBS51388_004246-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004246-T1.cdsCBS51388_004246-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004246-T1CBS51388_004246-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_7.2
NoteSECRETED:SignalP(1-16)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:187167..187478 +