You are here

Home

CBS51388_004261-T1, CBS51388_004261-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004261-T1
Unique NameCBS51388_004261-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:239156..240662+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004261-T1 ID=CBS51388_004261-T1|Name=CBS51388_004261-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1507bp|location=Sequence derived from alignment at An07:239156..240662+ (Aspergillus niger CBS 513.88)
ATGTCTCAGGCTGCGGGGCTACACCGAGAATCGGCTACAGGCAAGTTTGA
GGAGATTGAGGAACGGAAGCGAGTCTGGTGGACAATATACACTTGGGACC
GTTTTGCGTCCATCACCTACGGTCGGCCATTGGGCATCAATGATAAGGAC
TGTAATCTCAGCATGCCAGCGGATAATCTGGAGAATCCATATTTTATTAC
ACCAAATTCGGAGCAAGGGTGCACCATTAGCTATTCTCCTTACCAAAGAG
AATTAAACACCCTCTACCTTCTGGCATCTCCAGCTCTGGAGTTTATTTTT
GGCTCGCGCACTTCAGGTTCCTCCAAGGCATTGACTGGAGATGTCTACAT
TGAGCTAGTGAAAGAGGCGACCCAGAATCTCCAGAAGTGGCAGAGTAACC
TTCCTGGCTACTTGACTTTGGACTTCGACCAGGATTTCGAACCCGGCAGT
GGACCGAGTGCAAGAGCGCACGCTCTACAATCCTTGTCGTTGCAATTGAC
CTACGACAATATTCTCGTTGTCCTCCACCGGCCGTTGCTGGCAAGGCAAG
TCAGACATCTGTCGATAAGCCATCCCACTTCGGGCGCAGGACTTGGGACA
GAATCGCCCAATCCACACCCTGAAGCAGGCTCACCAGCTCAAAAGCTGTC
ACCGTTTGAAGCCATGTCGCCTATTGAGCCGGTCAAAAGTTCAATGCACT
GGTGGAATGCTGCCCTCAGAACGTCGCGTGTCACCGAAGTGCCGGTACTT
GCTCAATTGGCAACAGATAGTCATCTTGTCGCCTTCCTTGCCATCAATAT
TTTCCATGCTGCAATTGTACTAGCGGTCATGGCTCTATCAGACCCATTAT
CAGACACAACCCAAGTGGCAAAGCGCACAATTACCCGGATCTTACGTCTA
CAGAGCCTTTTGGGTGAGCGGTCAGCTTTATCAAGACAAAGTACGACCGT
TTTGAAAAACGTGGTCACTCTAATCCTTCGTCGCGAATCGGAAACTATCT
TGGCTCCAGTCACAGGAAACAGTCAACAGACAGGGCACACATCCGCAACG
GGATCAGCGTCCATATCCGTGGAAGACACTCTGCGACTGCCCCTGGATGC
CACAGTAACACCGATCGACAGTTCCTTACGGCGGACGACATGGCCAGACT
ATGGCAGAATTGATCGGTTGAATGAGAGTTTAGCGTCAGTTCAAAATGGT
GAGCGCAAATGTCGTCTTCCTGTTCCTATGATATATCCAGAGAAACTAAG
TGTCTTTCTATCCAATAGTCATTCCTTCTGGCAAGGATGGTAGCTTCCAT
GACACACACGGCGCGAGAGGAAGTCAAGAACAGCTGCCTGATTTTCAGGA
GCACGCCCCGGCTGATAGCTCGTGGCATGGGTCATTCGAAGATAACTGGA
ATGACCCTAGCTTTCCCCTAGGAGTTCCAGAAATCACCCCGGAAGCCTTC
GGTGATAACGGGCTGTATTGGCTATGGGACATGTCATGGGCCGGAACGGA
TTCATGA
back to top

Coding sequence (CDS) from alignment at An07:239156..240662+

>CBS51388_004261-T1 ID=CBS51388_004261-T1|Name=CBS51388_004261-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2874bp|location=Sequence derived from alignment at An07:239156..240662+ (Aspergillus niger CBS 513.88)
ATGTCTCAGGCTGCGGGGCTACACCGAGAATCGGCTACAGGCAAGTTTGA
GGAGATTGAGGAACGGAAGCGAGTCTGGTGGACAATATACACTTGGGACC
GTTTTGCGTCCATCACCTACGGTCGGCCATTGGGCATCAATGATAAGGAC
TGTAATCTCAGCATGCCAGCGGATAATCTGGAGAATCCATATTTTATTAC
ACCAAATTCGGAGCAAGGGTGCACCATTAGCTATTCTCCTTACCAAAGAG
AATTAAACACCCTCTACCTTCTGGCATCTCCAGCTCTGGAGTTTATTTTT
GGCTCGCGCACTTCAGGTTCCTCCAAGGCATTGACTGGAGATGTCTACAT
TGAGCTAGTGAAAGAGGCGACCCAGAATCTCCAGAAGTGGCAGAGTAACC
TTCCTGGCTACTTGACTTTGGACTTCGACCAGGATTTCGAACCCGGCAGT
GGACCGAGTGCAAGAGCGCACGCTCTACAATCCTTGTCGTTGCAATTGAC
CTACGACAATATTCTCGTTGTCCTCCACCGGCCGTTGCTGGCAAGGCAAG
TCAGACATCTGTCGATAAGCCATCCCACTTCGGGCGCAGGACTTGGGACA
GAATCGCCCAATCCACACCCTGAAGCAGGCTCACCAGCTCAAAAGCTGTC
ACCGTTTGAAGCCATGTCGCCTATTGAGCCGGTCAAAAGTTCAATGCACT
GGTGGAATGCTGCCCTCAGAACGTCGCGTGTCACCGAAGTGCCGGTACTT
GCTCAATTGGCAACAGATAGTCATCTTGTCGCCTTCCTTGCCATCAATAT
TTTCCATGCTGCAATTGTACTAGCGGTCATGGCTCTATCAGACCCATTAT
CAGACACAACCCAAGTGGCAAAGCGCACAATTACCCGGATCTTACGTCTA
CAGAGCCTTTTGGGTGAGCGGTCAGCTTTATCAAGACAAAGTACGACCGT
TTTGAAAAACGTGGTCACTCTAATCCTTCGTCGCGAATCGGAAACTATCT
TGGCTCCAGTCACAGGAAACAGTCAACAGACAGGGCACACATCCGCAACG
GGATCAGCGTCCATATCCGTGGAAGACACTCTGCGACTGCCCCTGGATGC
CACAGTAACACCGATCGACAGTTCCTTACGGCGGACGACATGGCCAGACT
ATGGCAGAATTGATCGGTTGAATGAGAGTTTAGCGTCAGTTCAAAATGTC
ATTCCTTCTGGCAAGGATGGTAGCTTCCATGACACACACGGCGCGAGAGG
AAGTCAAGAACAGCTGCCTGATTTTCAGGAGCACGCCCCGGCTGATAGCT
CGTGGCATGGGTCATTCGAAGATAACTGGAATGACCCTAGCTTTCCCCTA
GGAGTTCCAGAAATCACCCCGGAAGCCTTCGGTGATAACGGGCTGTATTG
GCTATGGGACATGTCATGGGCCGGAACGGATTCATGAATGTCTCAGGCTG
CGGGGCTACACCGAGAATCGGCTACAGGCAAGTTTGAGGAGATTGAGGAA
CGGAAGCGAGTCTGGTGGACAATATACACTTGGGACCGTTTTGCGTCCAT
CACCTACGGTCGGCCATTGGGCATCAATGATAAGGACTGTAATCTCAGCA
TGCCAGCGGATAATCTGGAGAATCCATATTTTATTACACCAAATTCGGAG
CAAGGGTGCACCATTAGCTATTCTCCTTACCAAAGAGAATTAAACACCCT
CTACCTTCTGGCATCTCCAGCTCTGGAGTTTATTTTTGGCTCGCGCACTT
CAGGTTCCTCCAAGGCATTGACTGGAGATGTCTACATTGAGCTAGTGAAA
GAGGCGACCCAGAATCTCCAGAAGTGGCAGAGTAACCTTCCTGGCTACTT
GACTTTGGACTTCGACCAGGATTTCGAACCCGGCAGTGGACCGAGTGCAA
GAGCGCACGCTCTACAATCCTTGTCGTTGCAATTGACCTACGACAATATT
CTCGTTGTCCTCCACCGGCCGTTGCTGGCAAGGCAAGTCAGACATCTGTC
GATAAGCCATCCCACTTCGGGCGCAGGACTTGGGACAGAATCGCCCAATC
CACACCCTGAAGCAGGCTCACCAGCTCAAAAGCTGTCACCGTTTGAAGCC
ATGTCGCCTATTGAGCCGGTCAAAAGTTCAATGCACTGGTGGAATGCTGC
CCTCAGAACGTCGCGTGTCACCGAAGTGCCGGTACTTGCTCAATTGGCAA
CAGATAGTCATCTTGTCGCCTTCCTTGCCATCAATATTTTCCATGCTGCA
ATTGTACTAGCGGTCATGGCTCTATCAGACCCATTATCAGACACAACCCA
AGTGGCAAAGCGCACAATTACCCGGATCTTACGTCTACAGAGCCTTTTGG
GTGAGCGGTCAGCTTTATCAAGACAAAGTACGACCGTTTTGAAAAACGTG
GTCACTCTAATCCTTCGTCGCGAATCGGAAACTATCTTGGCTCCAGTCAC
AGGAAACAGTCAACAGACAGGGCACACATCCGCAACGGGATCAGCGTCCA
TATCCGTGGAAGACACTCTGCGACTGCCCCTGGATGCCACAGTAACACCG
ATCGACAGTTCCTTACGGCGGACGACATGGCCAGACTATGGCAGAATTGA
TCGGTTGAATGAGAGTTTAGCGTCAGTTCAAAATGTCATTCCTTCTGGCA
AGGATGGTAGCTTCCATGACACACACGGCGCGAGAGGAAGTCAAGAACAG
CTGCCTGATTTTCAGGAGCACGCCCCGGCTGATAGCTCGTGGCATGGGTC
ATTCGAAGATAACTGGAATGACCCTAGCTTTCCCCTAGGAGTTCCAGAAA
TCACCCCGGAAGCCTTCGGTGATAACGGGCTGTATTGGCTATGGGACATG
TCATGGGCCGGAACGGATTCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004261CBS51388_004261Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004261-T1.exon1CBS51388_004261-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004261-T1.exon2CBS51388_004261-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004261-T1.cdsCBS51388_004261-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004261-T1CBS51388_004261-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:239156..240662 +
Powered by Drupal