|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:242690..244503+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004263-T1 ID=CBS51388_004263-T1|Name=CBS51388_004263-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1814bp|location=Sequence derived from alignment at An07:242690..244503+ (Aspergillus niger CBS 513.88)
ATGTCCTCTCTACCGGCGGATAATGCCGCTTTGACTCGCACTGCACAGGC
CGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGGCTGGAGAGAAAGCTGA
AGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAAGGGAACCCCATTGCTC
TACGCGACATGTGGTTTCGGCAGTCTGGGTGATGCCCTGTTTGGGTACAA
CTCTGGTATACCTTTCTTCTTTTCAGCTTTCTGATAAACAAGTCAATATG
AGTCGTTGCTAATAGCTATGCTACATAGGAATTATGTCAGGTCTCCTCGT
CAATCCTGCTTTTGTAGCTCGCTTCTTCAAAGACTACGGCGGTGCTGACG
GCTCAACAACCGGAGTCGATCCTTCGATCACCGGGATAGCTGTTGCTTGT
CTACAAGCGTCCGCAGCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCGA
TATGATGGGGCGCAAGCGATGTGTTCGTCTTGGCGGGTTCATCTACTTTT
TCAGTGCGTTCATTCAGATCTTCGCGCCTGGGTTTGGCACCTTCATTGCT
GGTCGCACCATTCAAGGTCTAGGTGTTGGGTTTCTTTCCATGACAGTACC
TATCATTCAGACTGAGATTGCCGCCCCGCATCGTCGTGGTTTAATGGTGG
GAATTGAATACACGTTTCAGATTGCAGGATACATGCTTTCATGTTGGGTA
GATTATGGATTTAATTTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTCC
ATTCATCATCCAAATTGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTCT
TTCTCCCCGAGACACCTCGTTGGCTGGCCAAAAACGGATTCATGCAAGAA
AGCTTGCAGACGGTCGCTGACCTTCACGCCAATGGCGATACTCAAGCGGA
ACATGTGCAGCAGGTGTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAAA
CCAACTTAGGAAAGTCATCGTGGATGGTGAGTTCTATTACGCCTGTCATG
GGATGTCATGCAAGTGCGAAACTGACCATAGACAGGAAATGTTCACCCGA
TACCGTAAGCGGACCATCGTCGGAGTAACTGTCCAAATGTTTGCACAACT
TAACGGAATCAACATCATCTCCTTTTACCTTCCCAGCACACTTGCTACCG
CCGGCTTCGATGAGCGAAAATCCCTTCTGTACACCGCAGCCAATGCACTA
CCTTACACTGCGGCCACAATTTCGACTTGGTGGTTAGCAGACCGATGGGG
ACGGAAACCATTACTAATCCTTGGAGGTGAGTCCATTTTCTCCCCTCCCG
ATACCTTCATGTACACTGTAAGCACCCGGCTAAGACATGCATCAAAACAG
GTATCGGAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTTCACCGAAGCA
GACCTAGACGTCCAGGTCCGCGCCAAGGGCCAATACGCCTTCGTTATGCT
ATACAACATCCTATACGGCTTCACCTGGGGTCCAATGCCATGGCTGCTAC
CAGCTGAAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAATGGCTCTGGCT
ACTACCAGCAACTGGATCTTCAACTTCATCATCGGCATGGTATCTCCGGA
TGCGTTCGCAGGTATCAACGGATACTTCTACGTTGTTATTGCTGGGTTCT
GTCTCTTCTCTGCAGGCCTGGTACACTTCTACTATGTTGAGACGGCCAAT
AGCACGCTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAGCGTTTGCAGA
TGCTGATGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATAGATTATAGGA
AGGATGTTGTGTGA back to topCoding sequence (CDS) from alignment at An07:242690..244503+ >CBS51388_004263-T1 ID=CBS51388_004263-T1|Name=CBS51388_004263-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6432bp|location=Sequence derived from alignment at An07:242690..244503+ (Aspergillus niger CBS 513.88)
ATGTCCTCTCTACCGGCGGATAATGCCGCTTTGACTCGCACTGCACAGGC
CGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGGCTGGAGAGAAAGCTGA
AGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAAGGGAACCCCATTGCTC
TACGCGACATGTGGTTTCGGCAGTCTGGGTGATGCCCTGTTTGGGTACAA
CTCTGGAATTATGTCAGGTCTCCTCGTCAATCCTGCTTTTGTAGCTCGCT
TCTTCAAAGACTACGGCGGTGCTGACGGCTCAACAACCGGAGTCGATCCT
TCGATCACCGGGATAGCTGTTGCTTGTCTACAAGCGTCCGCAGCGGTGGG
TGCACTCCTTGCAGGACGCTTGGGCGATATGATGGGGCGCAAGCGATGTG
TTCGTCTTGGCGGGTTCATCTACTTTTTCAGTGCGTTCATTCAGATCTTC
GCGCCTGGGTTTGGCACCTTCATTGCTGGTCGCACCATTCAAGGTCTAGG
TGTTGGGTTTCTTTCCATGACAGTACCTATCATTCAGACTGAGATTGCCG
CCCCGCATCGTCGTGGTTTAATGGTGGGAATTGAATACACGTTTCAGATT
GCAGGATACATGCTTTCATGTTGGGTAGATTATGGATTTAATTTTCTTTT
GCCCAGTGAAATGTCCTGGCAAGGTCCATTCATCATCCAAATTGCTCTCT
CCTTCATTCTTCTGGCCATGTCGTTCTTTCTCCCCGAGACACCTCGTTGG
CTGGCCAAAAACGGATTCATGCAAGAAAGCTTGCAGACGGTCGCTGACCT
TCACGCCAATGGCGATACTCAAGCGGAACATGTGCAGCAGGTGTTTGTGG
AAATCGAAGAAGCAGTTATCTTCGAAACCAACTTAGGAAAGTCATCGTGG
ATGGAAATGTTCACCCGATACCGTAAGCGGACCATCGTCGGAGTAACTGT
CCAAATGTTTGCACAACTTAACGGAATCAACATCATCTCCTTTTACCTTC
CCAGCACACTTGCTACCGCCGGCTTCGATGAGCGAAAATCCCTTCTGTAC
ACCGCAGCCAATGCACTACCTTACACTGCGGCCACAATTTCGACTTGGTG
GTTAGCAGACCGATGGGGACGGAAACCATTACTAATCCTTGGAGGTATCG
GAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTTCACCGAAGCAGACCTA
GACGTCCAGGTCCGCGCCAAGGGCCAATACGCCTTCGTTATGCTATACAA
CATCCTATACGGCTTCACCTGGGGTCCAATGCCATGGCTGCTACCAGCTG
AAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAATGGCTCTGGCTACTACC
AGCAACTGGATCTTCAACTTCATCATCGGCATGGTATCTCCGGATGCGTT
CGCAGGTATCAACGGATACTTCTACGTTGTTATTGCTGGGTTCTGTCTCT
TCTCTGCAGGCCTGGTACACTTCTACTATGTTGAGACGGCCAATAGCACG
CTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAGCGTTTGCAGATGCTGA
TGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATAGATTATAGGAAGGATG
TTGTGTGAATGTCCTCTCTACCGGCGGATAATGCCGCTTTGACTCGCACT
GCACAGGCCGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGGCTGGAGAG
AAAGCTGAAGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAAGGGAACCC
CATTGCTCTACGCGACATGTGGTTTCGGCAGTCTGGGTGATGCCCTGTTT
GGGTACAACTCTGGAATTATGTCAGGTCTCCTCGTCAATCCTGCTTTTGT
AGCTCGCTTCTTCAAAGACTACGGCGGTGCTGACGGCTCAACAACCGGAG
TCGATCCTTCGATCACCGGGATAGCTGTTGCTTGTCTACAAGCGTCCGCA
GCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCGATATGATGGGGCGCAA
GCGATGTGTTCGTCTTGGCGGGTTCATCTACTTTTTCAGTGCGTTCATTC
AGATCTTCGCGCCTGGGTTTGGCACCTTCATTGCTGGTCGCACCATTCAA
GGTCTAGGTGTTGGGTTTCTTTCCATGACAGTACCTATCATTCAGACTGA
GATTGCCGCCCCGCATCGTCGTGGTTTAATGGTGGGAATTGAATACACGT
TTCAGATTGCAGGATACATGCTTTCATGTTGGGTAGATTATGGATTTAAT
TTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTCCATTCATCATCCAAAT
TGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTCTTTCTCCCCGAGACAC
CTCGTTGGCTGGCCAAAAACGGATTCATGCAAGAAAGCTTGCAGACGGTC
GCTGACCTTCACGCCAATGGCGATACTCAAGCGGAACATGTGCAGCAGGT
GTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAAACCAACTTAGGAAAGT
CATCGTGGATGGAAATGTTCACCCGATACCGTAAGCGGACCATCGTCGGA
GTAACTGTCCAAATGTTTGCACAACTTAACGGAATCAACATCATCTCCTT
TTACCTTCCCAGCACACTTGCTACCGCCGGCTTCGATGAGCGAAAATCCC
TTCTGTACACCGCAGCCAATGCACTACCTTACACTGCGGCCACAATTTCG
ACTTGGTGGTTAGCAGACCGATGGGGACGGAAACCATTACTAATCCTTGG
AGGTATCGGAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTTCACCGAAG
CAGACCTAGACGTCCAGGTCCGCGCCAAGGGCCAATACGCCTTCGTTATG
CTATACAACATCCTATACGGCTTCACCTGGGGTCCAATGCCATGGCTGCT
ACCAGCTGAAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAATGGCTCTGG
CTACTACCAGCAACTGGATCTTCAACTTCATCATCGGCATGGTATCTCCG
GATGCGTTCGCAGGTATCAACGGATACTTCTACGTTGTTATTGCTGGGTT
CTGTCTCTTCTCTGCAGGCCTGGTACACTTCTACTATGTTGAGACGGCCA
ATAGCACGCTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAGCGTTTGCA
GATGCTGATGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATAGATTATAG
GAAGGATGTTGTGTGAATGTCCTCTCTACCGGCGGATAATGCCGCTTTGA
CTCGCACTGCACAGGCCGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGG
CTGGAGAGAAAGCTGAAGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAA
GGGAACCCCATTGCTCTACGCGACATGTGGTTTCGGCAGTCTGGGTGATG
CCCTGTTTGGGTACAACTCTGGAATTATGTCAGGTCTCCTCGTCAATCCT
GCTTTTGTAGCTCGCTTCTTCAAAGACTACGGCGGTGCTGACGGCTCAAC
AACCGGAGTCGATCCTTCGATCACCGGGATAGCTGTTGCTTGTCTACAAG
CGTCCGCAGCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCGATATGATG
GGGCGCAAGCGATGTGTTCGTCTTGGCGGGTTCATCTACTTTTTCAGTGC
GTTCATTCAGATCTTCGCGCCTGGGTTTGGCACCTTCATTGCTGGTCGCA
CCATTCAAGGTCTAGGTGTTGGGTTTCTTTCCATGACAGTACCTATCATT
CAGACTGAGATTGCCGCCCCGCATCGTCGTGGTTTAATGGTGGGAATTGA
ATACACGTTTCAGATTGCAGGATACATGCTTTCATGTTGGGTAGATTATG
GATTTAATTTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTCCATTCATC
ATCCAAATTGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTCTTTCTCCC
CGAGACACCTCGTTGGCTGGCCAAAAACGGATTCATGCAAGAAAGCTTGC
AGACGGTCGCTGACCTTCACGCCAATGGCGATACTCAAGCGGAACATGTG
CAGCAGGTGTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAAACCAACTT
AGGAAAGTCATCGTGGATGGAAATGTTCACCCGATACCGTAAGCGGACCA
TCGTCGGAGTAACTGTCCAAATGTTTGCACAACTTAACGGAATCAACATC
ATCTCCTTTTACCTTCCCAGCACACTTGCTACCGCCGGCTTCGATGAGCG
AAAATCCCTTCTGTACACCGCAGCCAATGCACTACCTTACACTGCGGCCA
CAATTTCGACTTGGTGGTTAGCAGACCGATGGGGACGGAAACCATTACTA
ATCCTTGGAGGTATCGGAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTT
CACCGAAGCAGACCTAGACGTCCAGGTCCGCGCCAAGGGCCAATACGCCT
TCGTTATGCTATACAACATCCTATACGGCTTCACCTGGGGTCCAATGCCA
TGGCTGCTACCAGCTGAAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAAT
GGCTCTGGCTACTACCAGCAACTGGATCTTCAACTTCATCATCGGCATGG
TATCTCCGGATGCGTTCGCAGGTATCAACGGATACTTCTACGTTGTTATT
GCTGGGTTCTGTCTCTTCTCTGCAGGCCTGGTACACTTCTACTATGTTGA
GACGGCCAATAGCACGCTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAG
CGTTTGCAGATGCTGATGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATA
GATTATAGGAAGGATGTTGTGTGAATGTCCTCTCTACCGGCGGATAATGC
CGCTTTGACTCGCACTGCACAGGCCGTGGCTGCTCGGGAAGTAGAGCAGC
AGAGCTGGCTGGAGAGAAAGCTGAAGCCGACGAAGGTGAGAGCTTGGTAT
CCCTTCAAGGGAACCCCATTGCTCTACGCGACATGTGGTTTCGGCAGTCT
GGGTGATGCCCTGTTTGGGTACAACTCTGGAATTATGTCAGGTCTCCTCG
TCAATCCTGCTTTTGTAGCTCGCTTCTTCAAAGACTACGGCGGTGCTGAC
GGCTCAACAACCGGAGTCGATCCTTCGATCACCGGGATAGCTGTTGCTTG
TCTACAAGCGTCCGCAGCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCG
ATATGATGGGGCGCAAGCGATGTGTTCGTCTTGGCGGGTTCATCTACTTT
TTCAGTGCGTTCATTCAGATCTTCGCGCCTGGGTTTGGCACCTTCATTGC
TGGTCGCACCATTCAAGGTCTAGGTGTTGGGTTTCTTTCCATGACAGTAC
CTATCATTCAGACTGAGATTGCCGCCCCGCATCGTCGTGGTTTAATGGTG
GGAATTGAATACACGTTTCAGATTGCAGGATACATGCTTTCATGTTGGGT
AGATTATGGATTTAATTTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTC
CATTCATCATCCAAATTGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTC
TTTCTCCCCGAGACACCTCGTTGGCTGGCCAAAAACGGATTCATGCAAGA
AAGCTTGCAGACGGTCGCTGACCTTCACGCCAATGGCGATACTCAAGCGG
AACATGTGCAGCAGGTGTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAA
ACCAACTTAGGAAAGTCATCGTGGATGGAAATGTTCACCCGATACCGTAA
GCGGACCATCGTCGGAGTAACTGTCCAAATGTTTGCACAACTTAACGGAA
TCAACATCATCTCCTTTTACCTTCCCAGCACACTTGCTACCGCCGGCTTC
GATGAGCGAAAATCCCTTCTGTACACCGCAGCCAATGCACTACCTTACAC
TGCGGCCACAATTTCGACTTGGTGGTTAGCAGACCGATGGGGACGGAAAC
CATTACTAATCCTTGGAGGTATCGGAATGGCAGTCCTGCTTGGCATCGTC
TGCGCCTTCACCGAAGCAGACCTAGACGTCCAGGTCCGCGCCAAGGGCCA
ATACGCCTTCGTTATGCTATACAACATCCTATACGGCTTCACCTGGGGTC
CAATGCCATGGCTGCTACCAGCTGAAATCTTCCCCTTGCGTGGCCGCAGT
AAAGGAATGGCTCTGGCTACTACCAGCAACTGGATCTTCAACTTCATCAT
CGGCATGGTATCTCCGGATGCGTTCGCAGGTATCAACGGATACTTCTACG
TTGTTATTGCTGGGTTCTGTCTCTTCTCTGCAGGCCTGGTACACTTCTAC
TATGTTGAGACGGCCAATAGCACGCTGGAGGAAGTTGCAGAGTTGTTTGG
CGATACAGCGTTTGCAGATGCTGATGGGGAGGCGAGGGAGGCTTCTGACG
TGCGGATAGATTATAGGAAGGATGTTGTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:242690..244503 + |
|
