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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:290502..290917- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004284-T1 ID=CBS51388_004284-T1|Name=CBS51388_004284-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=416bp|location=Sequence derived from alignment at An07:290502..290917- (Aspergillus niger CBS 513.88)
ATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCC
GATTCATTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCT
GGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGTAAAT
GGATTTCTGGCGACTTGGTTGCGTGACATTTGACTAATCGACTCGTGTAG
GGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCG
CATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGC
AGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATGCTGATTATATTC
TTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTAT
TCAAGCCGTGCAGTGA back to topCoding sequence (CDS) from alignment at An07:290502..290917- >CBS51388_004284-T1 ID=CBS51388_004284-T1|Name=CBS51388_004284-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=864bp|location=Sequence derived from alignment at An07:290502..290917- (Aspergillus niger CBS 513.88)
GCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAG
TGAGGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGT
TCGCATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACC
GGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCA
TTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTT
ACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGC
TCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGAC
GAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTAC
AAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGC
GGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAA
GCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTG
CTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGCTCAAGGGCGATA
ACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGACGAGTTCATGAAC
CTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTACAAAGTCCGAAGA
AGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGCGGTGGAGCCGCT
CGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCTTCAGCA
ACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCCGCATAG
AGGGAAAAATCAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265NHW |
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR027078 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:290502..290917 - |
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