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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:299787..302925+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004286-T1 ID=CBS51388_004286-T1|Name=CBS51388_004286-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3139bp|location=Sequence derived from alignment at An07:299787..302925+ (Aspergillus niger CBS 513.88)
ATGACCTTGGCTCTGGCTACAATGACTCCGCTGGGTTCGGGGCCTAAACG
CGATCATACATCGAGCACAGAGATTGACATGATGACGGAAGCTGATGCGC
TCCATGCGGCTATTAATGGACCCCCACGCAAAAGGAAAAGGACCCGAAAG
GTTCAGACAGATCGCAAGTTTGAATGCACATTTGAGGGGTGCGGCAAGAG
TTACTCACGAGCGGAGCATCTGTACCGCCACCAACTGAACCGTACGCATG
CAATCCTTCCAAGAGCTTGTGAGCAAGTACTAACTGGCTGCTGCTCTAGA
TACCCCCAAGCAGATTTATCGGTGCGACTTTCCTGATTGTTACCGCTCGT
TCGTGCGACAAGACCTATGTATCCGTCATAGAGAACGCCACACCACCCAG
GGATCGCAGCTACAGAAGCGCGATCACTTTGCGCAGGCTGCAGCAACCAG
CAACAACCTGAAAAAGCCGCAAGTCTCTCAAGTCATGTCACAAGTGGACG
CGAACCACGCACCTACACTCATTCCGCTACCCTCCAATTATTCGCCCGTT
CAAGCCCCATCCGAGGGTCAGACAATGACAGTGCCTGCGATGAGTGCATC
GAATCAACACGTACACATGCCCTCGCCCTCAGGATCTGTGGGCATTGGCC
AGGGATTCAATTATCAGACTATGGTGTCCCATCATGCAGTGGACCTGTCT
GACCCTACGTTTTCCCGATCGAACAGTTCCAGTAATCATACACTCAGCTC
CCCCCCAGGACAGTCAAGCACAACAACCTTTAGTCCTCCTGAGATACAGG
CGGTGCCTCATACGGCGCTCGGTGGTCACTCTGCTGGCAAATCGTCCCCC
AATTCAGGAGACTTGAGCCACGAAGTGCGATCTCACCATTCCTTGGCCGA
AACATCTTCTCTAACACACGATATCGATGGCCCTTCATTGGCTCATCCCA
CATCCTATTCAGGCCTACAAATCCCTGTGGGGGGATACACAAATATATCG
ATGGCTCCAGCGACGTCGGCTTCGACGTCTCTGGACCGCGGAACACTAGA
GTCGATGTCAGAGATGATGACATCCGGCCCGTCAGTGGGAGATGCCGGCT
TCGACGCCTTGGCTTCTTGTGTCTACCCGGTGTTTGGTGGCGAAGCCCAC
AACCGGTCACCCTTCGCAATGGCGGATGATTTCACAGCATGGCTGTTTAA
CGATCCCGTTACAGGCTCTCCGTCCATGGGGTATCCTGCTCCCACTAACG
TGGTGCCAAATTACTTGGACGCTGTCCAACTACAGAACCAATTTTTCATG
AGTGATCCGGCGTATGGCAGCTTTCTCAGTGGTGTCATTCCGCATCATCC
CATGAGTGTCACAAGCATTCTGGATCCGGGATCACCGCGCGCCATCATGT
CAGAGGAGAAGAGACAAGAACTTCTTGCCCTCATGAGCTCGAGGTTTAAT
GAGGCCTTCTATGCAGTGTCTGCTAAGCGCAAGGATGCGCTGATGGACGG
TGACATTGACGACGATGACCATGTGCTAAGTCTACGCATGATGCAGATGT
ACATCGGCTCGTATTGGTACCATTTCCACTCTCAGTTGCCCATTCTACAT
CGTCCAACATTCGAGGCAGACAAAGCGCCTAATCTTCTTCTGCTCGCAGT
GATGGCTATTGGCGCATCCACGCTGGATAGAATTCACGGGTCAGAAGTAA
CCGAGGCAGCAGCGGAGTTGGCGAACTTTATCGCCTGGCATCTCCGAACG
GAGCTTTTCATGGATGCAGACTTTCGTCCACCAGCTAAGCTCTGGATTTT
CCAAGCACTCCTGCTGCTGGAGGTATATGAAAAGATGTACTCCACTCGTG
CGCTCCATGAGCGGGCGCATATCCATCACGACACCACACTTACACTGATG
CGACGGGGCAGCTCATTGATTGGCCGCTCTGCATTAGACTCTCCTGCAAG
CTTGCGCGATGATCGGCAGGCCCGGTCAGCTTCTGGATCGACACTGGCCC
CAGACTTTGTGGCTGAAGAGTCATGGACACACTGGATCAAGGCTGAGGCC
ACGAGGCGAGTGGCTTTTGCGGCTTTCGTTCTGGACTCTACCCACGCCAC
TATGTTCGGGCATTCGGCTAAGATGGTTGCTCACGAGCTTCGGTTACCGT
TGCCCTGTGATGAGGCGCTGTGGTCTGCGACTAGCGCCTCTGAGGTAGCT
CGAGTGCAATCGAGCCTGCATGCCAACGGAGTCAAGCCTGTCATGTTTTT
GGACGGCCTTAAGAAGACGCTTAACGGACAGCGGGTCCGGACAAATGCTT
TTGGACGAACCATTCTTATGGCTGGTTTGCTTAGCGTCAGTTGGCACATG
AATCAACGAGACCTACAGGTGAGCTCACTGGGTGGGCCACCGGCATTGGG
AGGCCGGGACAAATGGCGGTCAGCACTGTTGCGAGCCTATGATAATTGGC
GACGAGACTTTGATGAAGCGCTGGGCCAGTCACCATCGGGGCCATTTCAT
GGTGGATACCGTACCCGACATCCTCTAGACGACGATAATGTTTTTGAGTC
GCGCGACGTCCTCCATGGATTGGCGCATATGGCTTCTCACGTTGATATTG
TCGACTGTCAAATCTTCGCTGGAGCTGGTCGGCTCATGGGACGGTCTATC
ACCCCCAGAGACTACAAAGCGGCGCGCGAAAAGATGGTTGATCGCTGGGC
CACCAAGGCTACAGCCCGCGACGCCACGTTCTATGCTTTGAAGTTCTTAT
CGGAGTGCCTTCTGGATGAGAAACGAGCACTGAACGAGGATGGGGAACTG
TATTCGGGTCGAGACGATTACCTCTTGAACCGGCCCTGGGTGCTGTATGT
TGCGGCTCTAGTGGTCTGGTGCTATGGATATGCACTTGAAGGGCCCTTGA
AGACTCCTGTCAAGTTGAGCACCCCTGCTGCACAGCGGCAAGACATGCAG
GAGTTTCTGCGCCGGGTGGGCGGCGTCCGTGAGCCCAGCGACTTGGAAGG
GATGCAAGGATGCAACCGCTGTCTGGGCTTGTTATTGATCCTCCGGGACG
GGTTCGCCAACACGCGCTGGGAGTTATTGGCCGAAGCTGCCAATCTGCTC
ACCAGTTGTATCGACAAGCTGAATGGAGCAGCTTGCTGA back to topCoding sequence (CDS) from alignment at An07:299787..302925+ >CBS51388_004286-T1 ID=CBS51388_004286-T1|Name=CBS51388_004286-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6162bp|location=Sequence derived from alignment at An07:299787..302925+ (Aspergillus niger CBS 513.88)
ATGACCTTGGCTCTGGCTACAATGACTCCGCTGGGTTCGGGGCCTAAACG
CGATCATACATCGAGCACAGAGATTGACATGATGACGGAAGCTGATGCGC
TCCATGCGGCTATTAATGGACCCCCACGCAAAAGGAAAAGGACCCGAAAG
GTTCAGACAGATCGCAAGTTTGAATGCACATTTGAGGGGTGCGGCAAGAG
TTACTCACGAGCGGAGCATCTGTACCGCCACCAACTGAACCATACCCCCA
AGCAGATTTATCGGTGCGACTTTCCTGATTGTTACCGCTCGTTCGTGCGA
CAAGACCTATGTATCCGTCATAGAGAACGCCACACCACCCAGGGATCGCA
GCTACAGAAGCGCGATCACTTTGCGCAGGCTGCAGCAACCAGCAACAACC
TGAAAAAGCCGCAAGTCTCTCAAGTCATGTCACAAGTGGACGCGAACCAC
GCACCTACACTCATTCCGCTACCCTCCAATTATTCGCCCGTTCAAGCCCC
ATCCGAGGGTCAGACAATGACAGTGCCTGCGATGAGTGCATCGAATCAAC
ACGTACACATGCCCTCGCCCTCAGGATCTGTGGGCATTGGCCAGGGATTC
AATTATCAGACTATGGTGTCCCATCATGCAGTGGACCTGTCTGACCCTAC
GTTTTCCCGATCGAACAGTTCCAGTAATCATACACTCAGCTCCCCCCCAG
GACAGTCAAGCACAACAACCTTTAGTCCTCCTGAGATACAGGCGGTGCCT
CATACGGCGCTCGGTGGTCACTCTGCTGGCAAATCGTCCCCCAATTCAGG
AGACTTGAGCCACGAAGTGCGATCTCACCATTCCTTGGCCGAAACATCTT
CTCTAACACACGATATCGATGGCCCTTCATTGGCTCATCCCACATCCTAT
TCAGGCCTACAAATCCCTGTGGGGGGATACACAAATATATCGATGGCTCC
AGCGACGTCGGCTTCGACGTCTCTGGACCGCGGAACACTAGAGTCGATGT
CAGAGATGATGACATCCGGCCCGTCAGTGGGAGATGCCGGCTTCGACGCC
TTGGCTTCTTGTGTCTACCCGGTGTTTGGTGGCGAAGCCCACAACCGGTC
ACCCTTCGCAATGGCGGATGATTTCACAGCATGGCTGTTTAACGATCCCG
TTACAGGCTCTCCGTCCATGGGGTATCCTGCTCCCACTAACGTGGTGCCA
AATTACTTGGACGCTGTCCAACTACAGAACCAATTTTTCATGAGTGATCC
GGCGTATGGCAGCTTTCTCAGTGGTGTCATTCCGCATCATCCCATGAGTG
TCACAAGCATTCTGGATCCGGGATCACCGCGCGCCATCATGTCAGAGGAG
AAGAGACAAGAACTTCTTGCCCTCATGAGCTCGAGGTTTAATGAGGCCTT
CTATGCAGTGTCTGCTAAGCGCAAGGATGCGCTGATGGACGGTGACATTG
ACGACGATGACCATGTGCTAAGTCTACGCATGATGCAGATGTACATCGGC
TCGTATTGGTACCATTTCCACTCTCAGTTGCCCATTCTACATCGTCCAAC
ATTCGAGGCAGACAAAGCGCCTAATCTTCTTCTGCTCGCAGTGATGGCTA
TTGGCGCATCCACGCTGGATAGAATTCACGGGTCAGAAGTAACCGAGGCA
GCAGCGGAGTTGGCGAACTTTATCGCCTGGCATCTCCGAACGGAGCTTTT
CATGGATGCAGACTTTCGTCCACCAGCTAAGCTCTGGATTTTCCAAGCAC
TCCTGCTGCTGGAGGTATATGAAAAGATGTACTCCACTCGTGCGCTCCAT
GAGCGGGCGCATATCCATCACGACACCACACTTACACTGATGCGACGGGG
CAGCTCATTGATTGGCCGCTCTGCATTAGACTCTCCTGCAAGCTTGCGCG
ATGATCGGCAGGCCCGGTCAGCTTCTGGATCGACACTGGCCCCAGACTTT
GTGGCTGAAGAGTCATGGACACACTGGATCAAGGCTGAGGCCACGAGGCG
AGTGGCTTTTGCGGCTTTCGTTCTGGACTCTACCCACGCCACTATGTTCG
GGCATTCGGCTAAGATGGTTGCTCACGAGCTTCGGTTACCGTTGCCCTGT
GATGAGGCGCTGTGGTCTGCGACTAGCGCCTCTGAGGTAGCTCGAGTGCA
ATCGAGCCTGCATGCCAACGGAGTCAAGCCTGTCATGTTTTTGGACGGCC
TTAAGAAGACGCTTAACGGACAGCGGGTCCGGACAAATGCTTTTGGACGA
ACCATTCTTATGGCTGGTTTGCTTAGCGTCAGTTGGCACATGAATCAACG
AGACCTACAGGTGAGCTCACTGGGTGGGCCACCGGCATTGGGAGGCCGGG
ACAAATGGCGGTCAGCACTGTTGCGAGCCTATGATAATTGGCGACGAGAC
TTTGATGAAGCGCTGGGCCAGTCACCATCGGGGCCATTTCATGGTGGATA
CCGTACCCGACATCCTCTAGACGACGATAATGTTTTTGAGTCGCGCGACG
TCCTCCATGGATTGGCGCATATGGCTTCTCACGTTGATATTGTCGACTGT
CAAATCTTCGCTGGAGCTGGTCGGCTCATGGGACGGTCTATCACCCCCAG
AGACTACAAAGCGGCGCGCGAAAAGATGGTTGATCGCTGGGCCACCAAGG
CTACAGCCCGCGACGCCACGTTCTATGCTTTGAAGTTCTTATCGGAGTGC
CTTCTGGATGAGAAACGAGCACTGAACGAGGATGGGGAACTGTATTCGGG
TCGAGACGATTACCTCTTGAACCGGCCCTGGGTGCTGTATGTTGCGGCTC
TAGTGGTCTGGTGCTATGGATATGCACTTGAAGGGCCCTTGAAGACTCCT
GTCAAGTTGAGCACCCCTGCTGCACAGCGGCAAGACATGCAGGAGTTTCT
GCGCCGGGTGGGCGGCGTCCGTGAGCCCAGCGACTTGGAAGGGATGCAAG
GATGCAACCGCTGTCTGGGCTTGTTATTGATCCTCCGGGACGGGTTCGCC
AACACGCGCTGGGAGTTATTGGCCGAAGCTGCCAATCTGCTCACCAGTTG
TATCGACAAGCTGAATGGAGCAGCTTGCTGAATGACCTTGGCTCTGGCTA
CAATGACTCCGCTGGGTTCGGGGCCTAAACGCGATCATACATCGAGCACA
GAGATTGACATGATGACGGAAGCTGATGCGCTCCATGCGGCTATTAATGG
ACCCCCACGCAAAAGGAAAAGGACCCGAAAGGTTCAGACAGATCGCAAGT
TTGAATGCACATTTGAGGGGTGCGGCAAGAGTTACTCACGAGCGGAGCAT
CTGTACCGCCACCAACTGAACCATACCCCCAAGCAGATTTATCGGTGCGA
CTTTCCTGATTGTTACCGCTCGTTCGTGCGACAAGACCTATGTATCCGTC
ATAGAGAACGCCACACCACCCAGGGATCGCAGCTACAGAAGCGCGATCAC
TTTGCGCAGGCTGCAGCAACCAGCAACAACCTGAAAAAGCCGCAAGTCTC
TCAAGTCATGTCACAAGTGGACGCGAACCACGCACCTACACTCATTCCGC
TACCCTCCAATTATTCGCCCGTTCAAGCCCCATCCGAGGGTCAGACAATG
ACAGTGCCTGCGATGAGTGCATCGAATCAACACGTACACATGCCCTCGCC
CTCAGGATCTGTGGGCATTGGCCAGGGATTCAATTATCAGACTATGGTGT
CCCATCATGCAGTGGACCTGTCTGACCCTACGTTTTCCCGATCGAACAGT
TCCAGTAATCATACACTCAGCTCCCCCCCAGGACAGTCAAGCACAACAAC
CTTTAGTCCTCCTGAGATACAGGCGGTGCCTCATACGGCGCTCGGTGGTC
ACTCTGCTGGCAAATCGTCCCCCAATTCAGGAGACTTGAGCCACGAAGTG
CGATCTCACCATTCCTTGGCCGAAACATCTTCTCTAACACACGATATCGA
TGGCCCTTCATTGGCTCATCCCACATCCTATTCAGGCCTACAAATCCCTG
TGGGGGGATACACAAATATATCGATGGCTCCAGCGACGTCGGCTTCGACG
TCTCTGGACCGCGGAACACTAGAGTCGATGTCAGAGATGATGACATCCGG
CCCGTCAGTGGGAGATGCCGGCTTCGACGCCTTGGCTTCTTGTGTCTACC
CGGTGTTTGGTGGCGAAGCCCACAACCGGTCACCCTTCGCAATGGCGGAT
GATTTCACAGCATGGCTGTTTAACGATCCCGTTACAGGCTCTCCGTCCAT
GGGGTATCCTGCTCCCACTAACGTGGTGCCAAATTACTTGGACGCTGTCC
AACTACAGAACCAATTTTTCATGAGTGATCCGGCGTATGGCAGCTTTCTC
AGTGGTGTCATTCCGCATCATCCCATGAGTGTCACAAGCATTCTGGATCC
GGGATCACCGCGCGCCATCATGTCAGAGGAGAAGAGACAAGAACTTCTTG
CCCTCATGAGCTCGAGGTTTAATGAGGCCTTCTATGCAGTGTCTGCTAAG
CGCAAGGATGCGCTGATGGACGGTGACATTGACGACGATGACCATGTGCT
AAGTCTACGCATGATGCAGATGTACATCGGCTCGTATTGGTACCATTTCC
ACTCTCAGTTGCCCATTCTACATCGTCCAACATTCGAGGCAGACAAAGCG
CCTAATCTTCTTCTGCTCGCAGTGATGGCTATTGGCGCATCCACGCTGGA
TAGAATTCACGGGTCAGAAGTAACCGAGGCAGCAGCGGAGTTGGCGAACT
TTATCGCCTGGCATCTCCGAACGGAGCTTTTCATGGATGCAGACTTTCGT
CCACCAGCTAAGCTCTGGATTTTCCAAGCACTCCTGCTGCTGGAGGTATA
TGAAAAGATGTACTCCACTCGTGCGCTCCATGAGCGGGCGCATATCCATC
ACGACACCACACTTACACTGATGCGACGGGGCAGCTCATTGATTGGCCGC
TCTGCATTAGACTCTCCTGCAAGCTTGCGCGATGATCGGCAGGCCCGGTC
AGCTTCTGGATCGACACTGGCCCCAGACTTTGTGGCTGAAGAGTCATGGA
CACACTGGATCAAGGCTGAGGCCACGAGGCGAGTGGCTTTTGCGGCTTTC
GTTCTGGACTCTACCCACGCCACTATGTTCGGGCATTCGGCTAAGATGGT
TGCTCACGAGCTTCGGTTACCGTTGCCCTGTGATGAGGCGCTGTGGTCTG
CGACTAGCGCCTCTGAGGTAGCTCGAGTGCAATCGAGCCTGCATGCCAAC
GGAGTCAAGCCTGTCATGTTTTTGGACGGCCTTAAGAAGACGCTTAACGG
ACAGCGGGTCCGGACAAATGCTTTTGGACGAACCATTCTTATGGCTGGTT
TGCTTAGCGTCAGTTGGCACATGAATCAACGAGACCTACAGGTGAGCTCA
CTGGGTGGGCCACCGGCATTGGGAGGCCGGGACAAATGGCGGTCAGCACT
GTTGCGAGCCTATGATAATTGGCGACGAGACTTTGATGAAGCGCTGGGCC
AGTCACCATCGGGGCCATTTCATGGTGGATACCGTACCCGACATCCTCTA
GACGACGATAATGTTTTTGAGTCGCGCGACGTCCTCCATGGATTGGCGCA
TATGGCTTCTCACGTTGATATTGTCGACTGTCAAATCTTCGCTGGAGCTG
GTCGGCTCATGGGACGGTCTATCACCCCCAGAGACTACAAAGCGGCGCGC
GAAAAGATGGTTGATCGCTGGGCCACCAAGGCTACAGCCCGCGACGCCAC
GTTCTATGCTTTGAAGTTCTTATCGGAGTGCCTTCTGGATGAGAAACGAG
CACTGAACGAGGATGGGGAACTGTATTCGGGTCGAGACGATTACCTCTTG
AACCGGCCCTGGGTGCTGTATGTTGCGGCTCTAGTGGTCTGGTGCTATGG
ATATGCACTTGAAGGGCCCTTGAAGACTCCTGTCAAGTTGAGCACCCCTG
CTGCACAGCGGCAAGACATGCAGGAGTTTCTGCGCCGGGTGGGCGGCGTC
CGTGAGCCCAGCGACTTGGAAGGGATGCAAGGATGCAACCGCTGTCTGGG
CTTGTTATTGATCCTCCGGGACGGGTTCGCCAACACGCGCTGGGAGTTAT
TGGCCGAAGCTGCCAATCTGCTCACCAGTTGTATCGACAAGCTGAATGGA
GCAGCTTGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:299787..302925 + |
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