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CBS51388_004291-T1, CBS51388_004291-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004291-T1
Unique NameCBS51388_004291-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:312814..314546+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004291-T1 ID=CBS51388_004291-T1|Name=CBS51388_004291-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1733bp|location=Sequence derived from alignment at An07:312814..314546+ (Aspergillus niger CBS 513.88)
ATGCCGCGAAGGCCCATCACATCAGATCCAACGAAGCGCAGAAGGTCAGA
CGGCACAAGATCGCGAAATGGGTGTCGCACCTGTCGGTAAGTTACTACCA
TCCAGGTCTCACATGACTGCGGTTTGCCGCTAATCCTCCGTCGCATATAT
ACAGCGCCCGCCGCATCAAATGCGACGAAACCCCCAACCAATGCAAAAAC
TGCACATCAACCGGGCGCTCTTGTACCTATGACATCCATCGCCTCCCCCG
TGCCGCAAATAATACGTACCGTTTTCCCCACGACCTACTCCCTCAAGTAA
CGGACGGCTTCCGCTGGACGATAACATCCGACGAGCGGCGCTGCTTCTCA
CACTTCCAACACTTTACAATCCCAGGATTACTGGAATTATTCGACTCGGA
ACTATGGAAGCAGCTCGTCCTTCAAATCAGTTACTCCGAGCCGGCAGTCT
ACCACGCTGCGGTGGCCTTGAGCGCCGTACACCAGGACGTCGAGGTATCG
GGGATGCCATTGCCAGGACAGACTCGACAGAATATCTGGCAGAAGTTTGC
ACTCGAACAGTCCGCACGCTCATTCGGGATATTAAGCCGACGGCATGCGA
GTGATCCCCACTTGAGAGAGGTCATGTTGCTCTGTTGTCTTCTATACTCG
CTCCTAGAGCTCCTACAGGGCCAATACGAGCGAGCATGCCACCACCTCCA
AGGAGGCCTACGTATACTCCGAGAGCTCAAAGTCCAGAAGCCTCTAGCAG
ACGAAACTGAGTCACCCGTGGAGAAATGTTTAGTGGCAGCCTTCGTACAG
CTAGATATCCAATCGACATACTACGGCGTCGACGGACCAGTTCTATGCGT
GGACAACGAACTAGGCAAATACCAATGGCAACTGAAAAATACCGAGTCAT
TCGCAAGCCTCATCGAGGCCCGTCAAGCCATCGAGCCCCTAGTCAGTGGA
GTATTCCGATTCACATCACAATCCTGGCCACTATCTCCCGCCGACGTGGC
GAGAGATTACAACGCCCTGCTTCCGCGTCAATACCAACTCCTCTCCCAAT
TAACCCACTACGCCGAACTCTTCACCCCATTCTACACCCACGCATACCCC
ACCCTCACGCGAAAAGAGCAACGCGGCTCCGACATCATCTACATCCTCCA
CCGGACCCTCACACTGTCCGTCAAAACCTGCCTCCTAGCCAAGAACCCCG
CCGTGCTCGACATCTACACCCCGGAATACCAAGAAGCATTATACCTCGTC
GAAGCACTATTACACAAGTACCCCGAACGACCAGCATTCACACTAGACGT
GGGCATTCTACCCAGCTTGTATCTGATCTCGTTCGGATGCTACGATATCC
GAGTACGGCTGCGCGCCATCGAAGTGCTGCAGCAATGGCCGCATCGGGAG
GGACTGTTCGAGTCGAAATGGGCGTCGTTTCTCTTGCTGGAGTTTGTGAA
AGCGGATATCAAGAAGGATGCGGAGAATGTGCCAGAATTGACGGTGAGTG
AGGGTTCCGCGTCCGGGTCTGGCTCAAGTTCGGCTGCGAGTTCGCCCTCT
GCTACGGTGGATCAGTATATGTCTACTGTTGGGCATATTGAGCGCGTTCA
GCAGCAGATTATGACTGGTCAGGACTTTCTGTTGCAGGATGCGCTGCAGA
GCGCGGATTATTTGACTTCGTGGTCGTGCGTTAAGGCGATAGCGCCGAAG
AGGGGGCGCATGGCTAAAGGATCATCTACTTAA
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Coding sequence (CDS) from alignment at An07:312814..314546+

>CBS51388_004291-T1 ID=CBS51388_004291-T1|Name=CBS51388_004291-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3330bp|location=Sequence derived from alignment at An07:312814..314546+ (Aspergillus niger CBS 513.88)
ATGCCGCGAAGGCCCATCACATCAGATCCAACGAAGCGCAGAAGGTCAGA
CGGCACAAGATCGCGAAATGGGTGTCGCACCTGTCGCGCCCGCCGCATCA
AATGCGACGAAACCCCCAACCAATGCAAAAACTGCACATCAACCGGGCGC
TCTTGTACCTATGACATCCATCGCCTCCCCCGTGCCGCAAATAATACGTA
CCGTTTTCCCCACGACCTACTCCCTCAAGTAACGGACGGCTTCCGCTGGA
CGATAACATCCGACGAGCGGCGCTGCTTCTCACACTTCCAACACTTTACA
ATCCCAGGATTACTGGAATTATTCGACTCGGAACTATGGAAGCAGCTCGT
CCTTCAAATCAGTTACTCCGAGCCGGCAGTCTACCACGCTGCGGTGGCCT
TGAGCGCCGTACACCAGGACGTCGAGGTATCGGGGATGCCATTGCCAGGA
CAGACTCGACAGAATATCTGGCAGAAGTTTGCACTCGAACAGTCCGCACG
CTCATTCGGGATATTAAGCCGACGGCATGCGAGTGATCCCCACTTGAGAG
AGGTCATGTTGCTCTGTTGTCTTCTATACTCGCTCCTAGAGCTCCTACAG
GGCCAATACGAGCGAGCATGCCACCACCTCCAAGGAGGCCTACGTATACT
CCGAGAGCTCAAAGTCCAGAAGCCTCTAGCAGACGAAACTGAGTCACCCG
TGGAGAAATGTTTAGTGGCAGCCTTCGTACAGCTAGATATCCAATCGACA
TACTACGGCGTCGACGGACCAGTTCTATGCGTGGACAACGAACTAGGCAA
ATACCAATGGCAACTGAAAAATACCGAGTCATTCGCAAGCCTCATCGAGG
CCCGTCAAGCCATCGAGCCCCTAGTCAGTGGAGTATTCCGATTCACATCA
CAATCCTGGCCACTATCTCCCGCCGACGTGGCGAGAGATTACAACGCCCT
GCTTCCGCGTCAATACCAACTCCTCTCCCAATTAACCCACTACGCCGAAC
TCTTCACCCCATTCTACACCCACGCATACCCCACCCTCACGCGAAAAGAG
CAACGCGGCTCCGACATCATCTACATCCTCCACCGGACCCTCACACTGTC
CGTCAAAACCTGCCTCCTAGCCAAGAACCCCGCCGTGCTCGACATCTACA
CCCCGGAATACCAAGAAGCATTATACCTCGTCGAAGCACTATTACACAAG
TACCCCGAACGACCAGCATTCACACTAGACGTGGGCATTCTACCCAGCTT
GTATCTGATCTCGTTCGGATGCTACGATATCCGAGTACGGCTGCGCGCCA
TCGAAGTGCTGCAGCAATGGCCGCATCGGGAGGGACTGTTCGAGTCGAAA
TGGGCGTCGTTTCTCTTGCTGGAGTTTGTGAAAGCGGATATCAAGAAGGA
TGCGGAGAATGTGCCAGAATTGACGGTGAGTGAGGGTTCCGCGTCCGGGT
CTGGCTCAAGTTCGGCTGCGAGTTCGCCCTCTGCTACGGTGGATCAGTAT
ATGTCTACTGTTGGGCATATTGAGCGCGTTCAGCAGCAGATTATGACTGG
TCAGGACTTTCTGTTGCAGGATGCGCTGCAGAGCGCGGATTATTTGACTT
CGTGGTCGTGCGTTAAGGCGATAGCGCCGAAGAGGGGGCGCATGGCTAAA
GGATCATCTACTTAAATGCCGCGAAGGCCCATCACATCAGATCCAACGAA
GCGCAGAAGGTCAGACGGCACAAGATCGCGAAATGGGTGTCGCACCTGTC
GCGCCCGCCGCATCAAATGCGACGAAACCCCCAACCAATGCAAAAACTGC
ACATCAACCGGGCGCTCTTGTACCTATGACATCCATCGCCTCCCCCGTGC
CGCAAATAATACGTACCGTTTTCCCCACGACCTACTCCCTCAAGTAACGG
ACGGCTTCCGCTGGACGATAACATCCGACGAGCGGCGCTGCTTCTCACAC
TTCCAACACTTTACAATCCCAGGATTACTGGAATTATTCGACTCGGAACT
ATGGAAGCAGCTCGTCCTTCAAATCAGTTACTCCGAGCCGGCAGTCTACC
ACGCTGCGGTGGCCTTGAGCGCCGTACACCAGGACGTCGAGGTATCGGGG
ATGCCATTGCCAGGACAGACTCGACAGAATATCTGGCAGAAGTTTGCACT
CGAACAGTCCGCACGCTCATTCGGGATATTAAGCCGACGGCATGCGAGTG
ATCCCCACTTGAGAGAGGTCATGTTGCTCTGTTGTCTTCTATACTCGCTC
CTAGAGCTCCTACAGGGCCAATACGAGCGAGCATGCCACCACCTCCAAGG
AGGCCTACGTATACTCCGAGAGCTCAAAGTCCAGAAGCCTCTAGCAGACG
AAACTGAGTCACCCGTGGAGAAATGTTTAGTGGCAGCCTTCGTACAGCTA
GATATCCAATCGACATACTACGGCGTCGACGGACCAGTTCTATGCGTGGA
CAACGAACTAGGCAAATACCAATGGCAACTGAAAAATACCGAGTCATTCG
CAAGCCTCATCGAGGCCCGTCAAGCCATCGAGCCCCTAGTCAGTGGAGTA
TTCCGATTCACATCACAATCCTGGCCACTATCTCCCGCCGACGTGGCGAG
AGATTACAACGCCCTGCTTCCGCGTCAATACCAACTCCTCTCCCAATTAA
CCCACTACGCCGAACTCTTCACCCCATTCTACACCCACGCATACCCCACC
CTCACGCGAAAAGAGCAACGCGGCTCCGACATCATCTACATCCTCCACCG
GACCCTCACACTGTCCGTCAAAACCTGCCTCCTAGCCAAGAACCCCGCCG
TGCTCGACATCTACACCCCGGAATACCAAGAAGCATTATACCTCGTCGAA
GCACTATTACACAAGTACCCCGAACGACCAGCATTCACACTAGACGTGGG
CATTCTACCCAGCTTGTATCTGATCTCGTTCGGATGCTACGATATCCGAG
TACGGCTGCGCGCCATCGAAGTGCTGCAGCAATGGCCGCATCGGGAGGGA
CTGTTCGAGTCGAAATGGGCGTCGTTTCTCTTGCTGGAGTTTGTGAAAGC
GGATATCAAGAAGGATGCGGAGAATGTGCCAGAATTGACGGTGAGTGAGG
GTTCCGCGTCCGGGTCTGGCTCAAGTTCGGCTGCGAGTTCGCCCTCTGCT
ACGGTGGATCAGTATATGTCTACTGTTGGGCATATTGAGCGCGTTCAGCA
GCAGATTATGACTGGTCAGGACTTTCTGTTGCAGGATGCGCTGCAGAGCG
CGGATTATTTGACTTCGTGGTCGTGCGTTAAGGCGATAGCGCCGAAGAGG
GGGCGCATGGCTAAAGGATCATCTACTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004291CBS51388_004291Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004291-T1.exon1CBS51388_004291-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004291-T1.exon2CBS51388_004291-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004291-T1.cdsCBS51388_004291-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004291-T1CBS51388_004291-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:312814..314546 +
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