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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:528227..531494+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004367-T1 ID=CBS51388_004367-T1|Name=CBS51388_004367-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3268bp|location=Sequence derived from alignment at An07:528227..531494+ (Aspergillus niger CBS 513.88)
ATGCCTGCTGTTGATGTTTCGTCCGTTCCTGCTGTCTCCGGCAAGGAGAC
TGCTCAGTCTGTCGCTGTCCTTGAGGACCTCATCAAGAACCTCAACATCT
CTTCCTCCCAGGATGAGGTGAACGCTGCTGCCGACAACCTGGCCCACCTG
TTCAGCGGCCCTATCCCCGAGCAGGCTCTCCCCCTCAAGTATGTATAACC
TCTACAAGATACCCCGCTATGCCGTCTAGGTGGCGGATGGCTAACGTGAA
AAATTTTTCAGGGCTGTCGAGACCTTCCAGAAGCAGCTCAGCAACAAGAA
GGATGCTGTTGTCCGTGAGCGTGCCTGCGAGGGTATCCGTGCTATTGCCT
CCCACGCCACTATCGCTCCTGGTGTCGAGCCTCACCTCGTCACCCTCCTC
GGCCCCGTCCTTGCCGCCGTCGGTGACAAGATGGTTCCCGTCAAGAACGC
CGCCCAGGGTGCTGCCCTCGCCATCGTGAAGGGTGTCAACGGCAACGCCG
TCAAGGCTGTCCTTCCCCCCATCCTCGAGTCCCTCGCCAACGCCCAGAAG
TGGCAGGAGAAGCTGGCTGCTCTCGAGTGCATCAACGCTCTCGTTGAGAC
TGCCCCTGCTCAGCTCTCTTTCCGTGTCCCCGAGCTCATCCCCGTTGTCT
CTGAGGCCATGTGGGACACCAAGGCCGACATCAAGAAGGCTGCCTACGCT
ACCATGGAGAAGGTCTGCGGTCTGATCGTCAACAAGGATATCGAGCGTTT
CATTCCCGAGCTCATCAAGTGTATCGCCAAGCCCGAGAACGTCCCCGAGA
CCGTTCACTTGCTCGGTGCTACCACTTTCGTCTCCGATGTCACCGGACCC
ACCCTCGCCATCATGGTTCCCCTGCTGGACCGTGGTCTGGTTGAGCGTGA
GACTGCCATCAAGCGTAAGTCCGCTGTCATTGTTGACAACATGTGTAAGC
TTGTGGAGGACCCCCAGATTGTCGCTCCCTTCTTGCCCAAGTTGATGCCC
CGTCTCGAGAAGAACTACGAGACCCTGGCCGATCCTGAGGCTCGTGGTAA
GACCAAGCAGGGTCTGGATACCCTGTGCCGTGTCGGTGATGTCAAGAACG
GCAAGATCCCCGAGATCTCCACCGCTGGTGACATCTCCACCGTCTCCGCT
ATCCTCAAGGAGATCCTCTCCTCCAAGTTCTCCGCCCAGGCTGAGAAGGC
CGAGTCCGTCATCACCTACGTTGCTGCCATCGCTGGTCAGCTCGTCGACG
AGAAGGACGCTGAGGTCACCAGCTGGACCCAGAACGCCCTCCCCTACATC
GCCGCCATCGTCGGTGATGAGGAGGCCAAGCCCATCGTCGAGACCCTCCG
CAAGCGCGCCTCCCCCGGTGCCGCTGCTGAGGATGAGGTTCTCTCCGACG
AGGAGGAGGGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGT
GCCAAGATTCTGCTGAACCAGACCAGCCTCCGCCTCAAGCGTGGTCAGCG
TTACGGTCTGCTCGGCCCCAACGGTACCGGTAAGACCACCCTCATGCGTG
CCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAGGATGAGGTCAAG
ACCGTCTACGTCGAGCACGACTTGGATGCTGCCGACACTGAGCAGACCGT
CATTGGCTGGACCATCAAGAAGCTCCGCGAGGTCGGTGTCGAGACCAGCC
AGGCGGACGTTGAGGCCAAGCTCGAAGAGTTCGGTTTCCTGCGTGAGCAG
TTCGAGGGTCCCATCACCTCCCTCTCCGGTGGTTGGAAGATGAAGCTGGC
TCTGGCCCGTGCCGTCTTCGAGTCCCCCGATATCCTGCTGCTCGATGAGC
CTACCAACCACTTGGACGTCAAGAACGTCGCCTGGTTGGAGAACTACCTG
TGCACCTCCCCCTGCACTTCCATCATCGTCTCCCACGACAGCAAGTTCTT
GGACAACGTCATCCAGCACGTCGTCCACTACGAGCGCTTCAAGCTCAAGC
GTTACCGTGGTAACCTGAGCGAGTTCGTCAAGCGTGTCCCCTCTGCTCGC
TCCTACTACGAGCTGGGTGCCTCCGAGCTCGAGTTCAAGTTCCCCGAGCC
CGGTTTCCTTGAGGGTGTCAAGACCAAGGCCAAGGCCATCATCCGTGTCA
ACAACATGTCCTTCCAGTACCCCGGCACCCCCAAGCCCCAGCTCACCGAC
ATCTCCTTCCAGGTCTCCCTGGGCTCCCGTATTGCCGTCATCGGTCCCAA
CGGTGCTGGTAAATCTACCCTGGTCAACGTCCTGACCGGTGAGTTGATCC
CCACCACTGGTGACGTCTACCAGCACGAGAACATCCGTATCGCCTACATC
AAGCAGCACGCTTTCGCTCACATTGATAACCACCTCGATTCCACTCCCTC
CGAGTACATCCAGTGGCGTTTCCAGACCGGTGAGGACCGTGAGACCATGG
ACCGTGCCAACAAGATCGTCACCGACGAGGATGAGAAGGCCATGGACAAG
ATCTACAAGATCGAGGGCCAGTTCCGTCGTGTCATTGGTATCCACGCTCG
TCGTAAGTTCAAGAACAGCTACGAGTACGAGTGCTCGTTCTCGCTGGGTG
AGAACATCGGCATGAAGAGCGAGCGCTGGACTCCCATGATGACCACCGAC
AACGCCTGGATTCCCCGTAACGAGATCATGCAGTCCCACGCCAAGATGGT
TGCCGAGGTTGACCAGAAGGAGGCCCTTGCCAGCGGTCAGTTCCGTCCTC
TCGTCCGTAAGGAGATTGAGGCCCACTGCGAGCAGTTCGGTCTCGATGCT
GAGCTGGTTTCCCACTCCCGCATGCGCGGTCTGTCCGGTGGTCAGCGTGT
CAAGGTCGTCCTTGCTGCCTGCTCTTGGCAGCGTCCCCACGTCATCGTCC
TTGATGAGCCTACTAACTACCTGGACCGTGACTCCCTGGGTGCTCTGTCC
AAGGCTCTGAAGAGCTTCGAGGGTGGTGTCATCATCATCACTCACTCCCG
TGAGTTCACTGAGAACCTCACCGAGGAAGTCTGGGCCGTCGTCGACGGTA
AGATGACTCCTTCCGGTCACAACTGGGTTCAGGGACAGGGTTCCGGTCCC
CGTCTTGAGGCCAAGGATGGTCCCGAGGAGGTGGTCGATGCTATGGGCAA
CAAGACAGTTGTCGAGAAAAAGAAGAAGCTCACTTCTGCTGAGCTTAGAA
AGAAGAGAAAGGAGCGTATGGCTCGTAAGAAGCGTGGAGAGGATGTTTCT
GACGACGAGGATATCTGA back to topCoding sequence (CDS) from alignment at An07:528227..531494+ >CBS51388_004367-T1 ID=CBS51388_004367-T1|Name=CBS51388_004367-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6390bp|location=Sequence derived from alignment at An07:528227..531494+ (Aspergillus niger CBS 513.88)
ATGCCTGCTGTTGATGTTTCGTCCGTTCCTGCTGTCTCCGGCAAGGAGAC
TGCTCAGTCTGTCGCTGTCCTTGAGGACCTCATCAAGAACCTCAACATCT
CTTCCTCCCAGGATGAGGTGAACGCTGCTGCCGACAACCTGGCCCACCTG
TTCAGCGGCCCTATCCCCGAGCAGGCTCTCCCCCTCAAGGCTGTCGAGAC
CTTCCAGAAGCAGCTCAGCAACAAGAAGGATGCTGTTGTCCGTGAGCGTG
CCTGCGAGGGTATCCGTGCTATTGCCTCCCACGCCACTATCGCTCCTGGT
GTCGAGCCTCACCTCGTCACCCTCCTCGGCCCCGTCCTTGCCGCCGTCGG
TGACAAGATGGTTCCCGTCAAGAACGCCGCCCAGGGTGCTGCCCTCGCCA
TCGTGAAGGGTGTCAACGGCAACGCCGTCAAGGCTGTCCTTCCCCCCATC
CTCGAGTCCCTCGCCAACGCCCAGAAGTGGCAGGAGAAGCTGGCTGCTCT
CGAGTGCATCAACGCTCTCGTTGAGACTGCCCCTGCTCAGCTCTCTTTCC
GTGTCCCCGAGCTCATCCCCGTTGTCTCTGAGGCCATGTGGGACACCAAG
GCCGACATCAAGAAGGCTGCCTACGCTACCATGGAGAAGGTCTGCGGTCT
GATCGTCAACAAGGATATCGAGCGTTTCATTCCCGAGCTCATCAAGTGTA
TCGCCAAGCCCGAGAACGTCCCCGAGACCGTTCACTTGCTCGGTGCTACC
ACTTTCGTCTCCGATGTCACCGGACCCACCCTCGCCATCATGGTTCCCCT
GCTGGACCGTGGTCTGGTTGAGCGTGAGACTGCCATCAAGCGTAAGTCCG
CTGTCATTGTTGACAACATGTGTAAGCTTGTGGAGGACCCCCAGATTGTC
GCTCCCTTCTTGCCCAAGTTGATGCCCCGTCTCGAGAAGAACTACGAGAC
CCTGGCCGATCCTGAGGCTCGTGGTAAGACCAAGCAGGGTCTGGATACCC
TGTGCCGTGTCGGTGATGTCAAGAACGGCAAGATCCCCGAGATCTCCACC
GCTGGTGACATCTCCACCGTCTCCGCTATCCTCAAGGAGATCCTCTCCTC
CAAGTTCTCCGCCCAGGCTGAGAAGGCCGAGTCCGTCATCACCTACGTTG
CTGCCATCGCTGGTCAGCTCGTCGACGAGAAGGACGCTGAGGTCACCAGC
TGGACCCAGAACGCCCTCCCCTACATCGCCGCCATCGTCGGTGATGAGGA
GGCCAAGCCCATCGTCGAGACCCTCCGCAAGCGCGCCTCCCCCGGTGCCG
CTGCTGAGGATGAGGTTCTCTCCGACGAGGAGGAGGGTGAGGATCTGTGC
AACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAACCAGAC
CAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACG
GTACCGGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAG
GGTTTCCCCAAGAAGGATGAGGTCAAGACCGTCTACGTCGAGCACGACTT
GGATGCTGCCGACACTGAGCAGACCGTCATTGGCTGGACCATCAAGAAGC
TCCGCGAGGTCGGTGTCGAGACCAGCCAGGCGGACGTTGAGGCCAAGCTC
GAAGAGTTCGGTTTCCTGCGTGAGCAGTTCGAGGGTCCCATCACCTCCCT
CTCCGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTCTTCGAGT
CCCCCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAG
AACGTCGCCTGGTTGGAGAACTACCTGTGCACCTCCCCCTGCACTTCCAT
CATCGTCTCCCACGACAGCAAGTTCTTGGACAACGTCATCCAGCACGTCG
TCCACTACGAGCGCTTCAAGCTCAAGCGTTACCGTGGTAACCTGAGCGAG
TTCGTCAAGCGTGTCCCCTCTGCTCGCTCCTACTACGAGCTGGGTGCCTC
CGAGCTCGAGTTCAAGTTCCCCGAGCCCGGTTTCCTTGAGGGTGTCAAGA
CCAAGGCCAAGGCCATCATCCGTGTCAACAACATGTCCTTCCAGTACCCC
GGCACCCCCAAGCCCCAGCTCACCGACATCTCCTTCCAGGTCTCCCTGGG
CTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACCCTGG
TCAACGTCCTGACCGGTGAGTTGATCCCCACCACTGGTGACGTCTACCAG
CACGAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACAT
TGATAACCACCTCGATTCCACTCCCTCCGAGTACATCCAGTGGCGTTTCC
AGACCGGTGAGGACCGTGAGACCATGGACCGTGCCAACAAGATCGTCACC
GACGAGGATGAGAAGGCCATGGACAAGATCTACAAGATCGAGGGCCAGTT
CCGTCGTGTCATTGGTATCCACGCTCGTCGTAAGTTCAAGAACAGCTACG
AGTACGAGTGCTCGTTCTCGCTGGGTGAGAACATCGGCATGAAGAGCGAG
CGCTGGACTCCCATGATGACCACCGACAACGCCTGGATTCCCCGTAACGA
GATCATGCAGTCCCACGCCAAGATGGTTGCCGAGGTTGACCAGAAGGAGG
CCCTTGCCAGCGGTCAGTTCCGTCCTCTCGTCCGTAAGGAGATTGAGGCC
CACTGCGAGCAGTTCGGTCTCGATGCTGAGCTGGTTTCCCACTCCCGCAT
GCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTTGCTGCCTGCT
CTTGGCAGCGTCCCCACGTCATCGTCCTTGATGAGCCTACTAACTACCTG
GACCGTGACTCCCTGGGTGCTCTGTCCAAGGCTCTGAAGAGCTTCGAGGG
TGGTGTCATCATCATCACTCACTCCCGTGAGTTCACTGAGAACCTCACCG
AGGAAGTCTGGGCCGTCGTCGACGGTAAGATGACTCCTTCCGGTCACAAC
TGGGTTCAGGGACAGGGTTCCGGTCCCCGTCTTGAGGCCAAGGATGGTCC
CGAGGAGGTGGTCGATGCTATGGGCAACAAGACAGTTGTCGAGAAAAAGA
AGAAGCTCACTTCTGCTGAGCTTAGAAAGAAGAGAAAGGAGCGTATGGCT
CGTAAGAAGCGTGGAGAGGATGTTTCTGACGACGAGGATATCTGAATGCC
TGCTGTTGATGTTTCGTCCGTTCCTGCTGTCTCCGGCAAGGAGACTGCTC
AGTCTGTCGCTGTCCTTGAGGACCTCATCAAGAACCTCAACATCTCTTCC
TCCCAGGATGAGGTGAACGCTGCTGCCGACAACCTGGCCCACCTGTTCAG
CGGCCCTATCCCCGAGCAGGCTCTCCCCCTCAAGGCTGTCGAGACCTTCC
AGAAGCAGCTCAGCAACAAGAAGGATGCTGTTGTCCGTGAGCGTGCCTGC
GAGGGTATCCGTGCTATTGCCTCCCACGCCACTATCGCTCCTGGTGTCGA
GCCTCACCTCGTCACCCTCCTCGGCCCCGTCCTTGCCGCCGTCGGTGACA
AGATGGTTCCCGTCAAGAACGCCGCCCAGGGTGCTGCCCTCGCCATCGTG
AAGGGTGTCAACGGCAACGCCGTCAAGGCTGTCCTTCCCCCCATCCTCGA
GTCCCTCGCCAACGCCCAGAAGTGGCAGGAGAAGCTGGCTGCTCTCGAGT
GCATCAACGCTCTCGTTGAGACTGCCCCTGCTCAGCTCTCTTTCCGTGTC
CCCGAGCTCATCCCCGTTGTCTCTGAGGCCATGTGGGACACCAAGGCCGA
CATCAAGAAGGCTGCCTACGCTACCATGGAGAAGGTCTGCGGTCTGATCG
TCAACAAGGATATCGAGCGTTTCATTCCCGAGCTCATCAAGTGTATCGCC
AAGCCCGAGAACGTCCCCGAGACCGTTCACTTGCTCGGTGCTACCACTTT
CGTCTCCGATGTCACCGGACCCACCCTCGCCATCATGGTTCCCCTGCTGG
ACCGTGGTCTGGTTGAGCGTGAGACTGCCATCAAGCGTAAGTCCGCTGTC
ATTGTTGACAACATGTGTAAGCTTGTGGAGGACCCCCAGATTGTCGCTCC
CTTCTTGCCCAAGTTGATGCCCCGTCTCGAGAAGAACTACGAGACCCTGG
CCGATCCTGAGGCTCGTGGTAAGACCAAGCAGGGTCTGGATACCCTGTGC
CGTGTCGGTGATGTCAAGAACGGCAAGATCCCCGAGATCTCCACCGCTGG
TGACATCTCCACCGTCTCCGCTATCCTCAAGGAGATCCTCTCCTCCAAGT
TCTCCGCCCAGGCTGAGAAGGCCGAGTCCGTCATCACCTACGTTGCTGCC
ATCGCTGGTCAGCTCGTCGACGAGAAGGACGCTGAGGTCACCAGCTGGAC
CCAGAACGCCCTCCCCTACATCGCCGCCATCGTCGGTGATGAGGAGGCCA
AGCCCATCGTCGAGACCCTCCGCAAGCGCGCCTCCCCCGGTGCCGCTGCT
GAGGATGAGGTTCTCTCCGACGAGGAGGAGGGTGAGGATCTGTGCAACTG
CACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAACCAGACCAGCC
TCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC
GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTT
CCCCAAGAAGGATGAGGTCAAGACCGTCTACGTCGAGCACGACTTGGATG
CTGCCGACACTGAGCAGACCGTCATTGGCTGGACCATCAAGAAGCTCCGC
GAGGTCGGTGTCGAGACCAGCCAGGCGGACGTTGAGGCCAAGCTCGAAGA
GTTCGGTTTCCTGCGTGAGCAGTTCGAGGGTCCCATCACCTCCCTCTCCG
GTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTCTTCGAGTCCCCC
GATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGT
CGCCTGGTTGGAGAACTACCTGTGCACCTCCCCCTGCACTTCCATCATCG
TCTCCCACGACAGCAAGTTCTTGGACAACGTCATCCAGCACGTCGTCCAC
TACGAGCGCTTCAAGCTCAAGCGTTACCGTGGTAACCTGAGCGAGTTCGT
CAAGCGTGTCCCCTCTGCTCGCTCCTACTACGAGCTGGGTGCCTCCGAGC
TCGAGTTCAAGTTCCCCGAGCCCGGTTTCCTTGAGGGTGTCAAGACCAAG
GCCAAGGCCATCATCCGTGTCAACAACATGTCCTTCCAGTACCCCGGCAC
CCCCAAGCCCCAGCTCACCGACATCTCCTTCCAGGTCTCCCTGGGCTCCC
GTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACCCTGGTCAAC
GTCCTGACCGGTGAGTTGATCCCCACCACTGGTGACGTCTACCAGCACGA
GAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACATTGATA
ACCACCTCGATTCCACTCCCTCCGAGTACATCCAGTGGCGTTTCCAGACC
GGTGAGGACCGTGAGACCATGGACCGTGCCAACAAGATCGTCACCGACGA
GGATGAGAAGGCCATGGACAAGATCTACAAGATCGAGGGCCAGTTCCGTC
GTGTCATTGGTATCCACGCTCGTCGTAAGTTCAAGAACAGCTACGAGTAC
GAGTGCTCGTTCTCGCTGGGTGAGAACATCGGCATGAAGAGCGAGCGCTG
GACTCCCATGATGACCACCGACAACGCCTGGATTCCCCGTAACGAGATCA
TGCAGTCCCACGCCAAGATGGTTGCCGAGGTTGACCAGAAGGAGGCCCTT
GCCAGCGGTCAGTTCCGTCCTCTCGTCCGTAAGGAGATTGAGGCCCACTG
CGAGCAGTTCGGTCTCGATGCTGAGCTGGTTTCCCACTCCCGCATGCGCG
GTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTTGCTGCCTGCTCTTGG
CAGCGTCCCCACGTCATCGTCCTTGATGAGCCTACTAACTACCTGGACCG
TGACTCCCTGGGTGCTCTGTCCAAGGCTCTGAAGAGCTTCGAGGGTGGTG
TCATCATCATCACTCACTCCCGTGAGTTCACTGAGAACCTCACCGAGGAA
GTCTGGGCCGTCGTCGACGGTAAGATGACTCCTTCCGGTCACAACTGGGT
TCAGGGACAGGGTTCCGGTCCCCGTCTTGAGGCCAAGGATGGTCCCGAGG
AGGTGGTCGATGCTATGGGCAACAAGACAGTTGTCGAGAAAAAGAAGAAG
CTCACTTCTGCTGAGCTTAGAAAGAAGAGAAAGGAGCGTATGGCTCGTAA
GAAGCGTGGAGAGGATGTTTCTGACGACGAGGATATCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0016887 | ATPase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR017871 |
| DBxref | InterPro:IPR011989 |
| DBxref | InterPro:IPR040533 |
| DBxref | InterPro:IPR003439 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF00005 |
| DBxref | PFAM:PF17947 |
| Product | translational elongation factor EF-1 alpha |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:528227..531494 + |
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