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CBS51388_004372-T1, CBS51388_004372-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004372-T1
Unique NameCBS51388_004372-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:554689..556273+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004372-T1 ID=CBS51388_004372-T1|Name=CBS51388_004372-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1585bp|location=Sequence derived from alignment at An07:554689..556273+ (Aspergillus niger CBS 513.88)
ATGGAGTCTTCGCCTCCAAGGAGCAGTTTGGCTGCTCCTGTGGCAGGCGT
GAAGCGTCCCGCGGCCCTGTTGCCTGCCTTTGAGCCATTGAGCTCCTCTC
CCTCACTTCCTCGTCCACAGAAGCGTGTAGCACGCGACAATCATGGCATT
GTCTCGACTTACCCTACGCCGGTGCCGACCTCGTCGACCCATATCTTGTC
CTCCTCCCCCCCGAGAATGGCCCTGCCGCGAACGGCCTCACGGCGTACAT
TTACTTCGTCCAGCTCCGAACGAACCCCTCTGTCTGCTGTCCCTACCATA
ATGCTTCCCGAGAGCGGGGAGCCCGTCCTGATGGGAAGATCCAGTGCCTC
GTGCCATCACCAGCTCGCGGCCAACCGTATGATATCAAGGGTGCATGTCA
AGGCCACATATAAACCCGCAGCTAATCCCTTTGACCCTGACAGAGTGGAA
ATCATGTGCATGGGATGGAATGGAATCAAATTGCATTGTCAAGGGAAAAC
ATATGATTTGGCCAAGGGGAAGACGTTTACCTCGGATATCAAGGATGCTG
ACATCATGATTGATGTTCATGACGCCCGCGTGCTGGTCCAGTGGCCTCAA
AGTGACCGAAAGGATTATGCCTCGACGGATTCCGAGCAGACATGGGAGGA
GACTACGCCCAAACGTAAAGCACAGTCCCGTCGGAGTATTCACGAAAGCC
CCAATGTGGAACGTCAGCGCTTGGCGTCTCCCGTCTCGCCGTCTCCTGCG
GTCAAGTCTCTGGTGCCCCCATCGTCGCCCATATATACCCCAACACGCTC
GCGGAATTCTGTGGTTGTATACGAAGATGACGCTTCGCCTAGCCGTCGCA
ACAGCACTGCTGATGCAGATCAGAAGTCATCGTCCATCGCTAGTGACATT
CTCCAGAGCTCGCAGTCCAGCGAGTTGAGCGAACTGAGCAAGCAAGATGA
CTTCTCGGATCATGATGAAGAAAATGACCCCATTGTTCATTCCTTTGGAC
CATTTGGTGACAATCTGCTTCCTCGGATGGCCTCATTCACTGCAGATGAG
TCTCCACTCCGTCCTGCACGGCCCCGCAACCAGGTTGTCCAGCCTACCAA
GTCCCCGAGACAACCATCCAAGACCGTCGAGTCCACCGAGAGCACAGTAA
CCAAGCTCGAGCCGTTGAGCGAGAGCTTTGAACGTGTTCAGAACCATGCC
GCCAACCAATTGGCGTTCTCTCGACTCTCGTCCACGCCATTTTCGACGAT
CTTGAATAACCTCCCACCGTCCTTATGGAGGCGGGACGGCCATCACAAAG
AGGGCCCCACGAAAGAAGAGATCCGTGCCATCCTGGACACGACCAAGTGC
ATTGGAAAGGTGGCACGGGAAGGAAAGGATGCCGCAGGAAAGCCTCTGGA
AAGCGAGTACTATTACATTCCTGACTTCGATGAGGACGACATGCGACGCG
AAGCGGTCGTGCATGATCTCAGGAAGCCAGGCCTCCGCAACTGCCGCAAG
CAGCATAAGGTACGTGCATTCCTCCTCAAACAAAATGACTTGTAGCTGAC
CTTAGCAGCAATACTTCTGGCGCAAACCCAAATAA
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Coding sequence (CDS) from alignment at An07:554689..556273+

>CBS51388_004372-T1 ID=CBS51388_004372-T1|Name=CBS51388_004372-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3072bp|location=Sequence derived from alignment at An07:554689..556273+ (Aspergillus niger CBS 513.88)
ATGGAGTCTTCGCCTCCAAGGAGCAGTTTGGCTGCTCCTGTGGCAGGCGT
GAAGCGTCCCGCGGCCCTGTTGCCTGCCTTTGAGCCATTGAGCTCCTCTC
CCTCACTTCCTCGTCCACAGAAGCGTGTAGCACGCGACAATCATGGCATT
GTCTCGACTTACCCTACGCCGGTGCCGACCTCGTCGACCCATATCTTGTC
CTCCTCCCCCCCGAGAATGGCCCTGCCGCGAACGGCCTCACGGCGTACAT
TTACTTCGTCCAGCTCCGAACGAACCCCTCTGTCTGCTGTCCCTACCATA
ATGCTTCCCGAGAGCGGGGAGCCCGTCCTGATGGGAAGATCCAGTGCCTC
GTGCCATCACCAGCTCGCGGCCAACCGTATGATATCAAGGGTGCATGTCA
AGGCCACATATAAACCCGCAGCTAATCCCTTTGACCCTGACAGAGTGGAA
ATCATGTGCATGGGATGGAATGGAATCAAATTGCATTGTCAAGGGAAAAC
ATATGATTTGGCCAAGGGGAAGACGTTTACCTCGGATATCAAGGATGCTG
ACATCATGATTGATGTTCATGACGCCCGCGTGCTGGTCCAGTGGCCTCAA
AGTGACCGAAAGGATTATGCCTCGACGGATTCCGAGCAGACATGGGAGGA
GACTACGCCCAAACGTAAAGCACAGTCCCGTCGGAGTATTCACGAAAGCC
CCAATGTGGAACGTCAGCGCTTGGCGTCTCCCGTCTCGCCGTCTCCTGCG
GTCAAGTCTCTGGTGCCCCCATCGTCGCCCATATATACCCCAACACGCTC
GCGGAATTCTGTGGTTGTATACGAAGATGACGCTTCGCCTAGCCGTCGCA
ACAGCACTGCTGATGCAGATCAGAAGTCATCGTCCATCGCTAGTGACATT
CTCCAGAGCTCGCAGTCCAGCGAGTTGAGCGAACTGAGCAAGCAAGATGA
CTTCTCGGATCATGATGAAGAAAATGACCCCATTGTTCATTCCTTTGGAC
CATTTGGTGACAATCTGCTTCCTCGGATGGCCTCATTCACTGCAGATGAG
TCTCCACTCCGTCCTGCACGGCCCCGCAACCAGGTTGTCCAGCCTACCAA
GTCCCCGAGACAACCATCCAAGACCGTCGAGTCCACCGAGAGCACAGTAA
CCAAGCTCGAGCCGTTGAGCGAGAGCTTTGAACGTGTTCAGAACCATGCC
GCCAACCAATTGGCGTTCTCTCGACTCTCGTCCACGCCATTTTCGACGAT
CTTGAATAACCTCCCACCGTCCTTATGGAGGCGGGACGGCCATCACAAAG
AGGGCCCCACGAAAGAAGAGATCCGTGCCATCCTGGACACGACCAAGTGC
ATTGGAAAGGTGGCACGGGAAGGAAAGGATGCCGCAGGAAAGCCTCTGGA
AAGCGAGTACTATTACATTCCTGACTTCGATGAGGACGACATGCGACGCG
AAGCGGTCGTGCATGATCTCAGGAAGCCAGGCCTCCGCAACTGCCGCAAG
CAGCATAAGCAATACTTCTGGCGCAAACCCAAATAAATGGAGTCTTCGCC
TCCAAGGAGCAGTTTGGCTGCTCCTGTGGCAGGCGTGAAGCGTCCCGCGG
CCCTGTTGCCTGCCTTTGAGCCATTGAGCTCCTCTCCCTCACTTCCTCGT
CCACAGAAGCGTGTAGCACGCGACAATCATGGCATTGTCTCGACTTACCC
TACGCCGGTGCCGACCTCGTCGACCCATATCTTGTCCTCCTCCCCCCCGA
GAATGGCCCTGCCGCGAACGGCCTCACGGCGTACATTTACTTCGTCCAGC
TCCGAACGAACCCCTCTGTCTGCTGTCCCTACCATAATGCTTCCCGAGAG
CGGGGAGCCCGTCCTGATGGGAAGATCCAGTGCCTCGTGCCATCACCAGC
TCGCGGCCAACCGTATGATATCAAGGGTGCATGTCAAGGCCACATATAAA
CCCGCAGCTAATCCCTTTGACCCTGACAGAGTGGAAATCATGTGCATGGG
ATGGAATGGAATCAAATTGCATTGTCAAGGGAAAACATATGATTTGGCCA
AGGGGAAGACGTTTACCTCGGATATCAAGGATGCTGACATCATGATTGAT
GTTCATGACGCCCGCGTGCTGGTCCAGTGGCCTCAAAGTGACCGAAAGGA
TTATGCCTCGACGGATTCCGAGCAGACATGGGAGGAGACTACGCCCAAAC
GTAAAGCACAGTCCCGTCGGAGTATTCACGAAAGCCCCAATGTGGAACGT
CAGCGCTTGGCGTCTCCCGTCTCGCCGTCTCCTGCGGTCAAGTCTCTGGT
GCCCCCATCGTCGCCCATATATACCCCAACACGCTCGCGGAATTCTGTGG
TTGTATACGAAGATGACGCTTCGCCTAGCCGTCGCAACAGCACTGCTGAT
GCAGATCAGAAGTCATCGTCCATCGCTAGTGACATTCTCCAGAGCTCGCA
GTCCAGCGAGTTGAGCGAACTGAGCAAGCAAGATGACTTCTCGGATCATG
ATGAAGAAAATGACCCCATTGTTCATTCCTTTGGACCATTTGGTGACAAT
CTGCTTCCTCGGATGGCCTCATTCACTGCAGATGAGTCTCCACTCCGTCC
TGCACGGCCCCGCAACCAGGTTGTCCAGCCTACCAAGTCCCCGAGACAAC
CATCCAAGACCGTCGAGTCCACCGAGAGCACAGTAACCAAGCTCGAGCCG
TTGAGCGAGAGCTTTGAACGTGTTCAGAACCATGCCGCCAACCAATTGGC
GTTCTCTCGACTCTCGTCCACGCCATTTTCGACGATCTTGAATAACCTCC
CACCGTCCTTATGGAGGCGGGACGGCCATCACAAAGAGGGCCCCACGAAA
GAAGAGATCCGTGCCATCCTGGACACGACCAAGTGCATTGGAAAGGTGGC
ACGGGAAGGAAAGGATGCCGCAGGAAAGCCTCTGGAAAGCGAGTACTATT
ACATTCCTGACTTCGATGAGGACGACATGCGACGCGAAGCGGTCGTGCAT
GATCTCAGGAAGCCAGGCCTCCGCAACTGCCGCAAGCAGCATAAGCAATA
CTTCTGGCGCAAACCCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004372CBS51388_004372Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004372-T1.exon1CBS51388_004372-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004372-T1.exon2CBS51388_004372-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004372-T1.cdsCBS51388_004372-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004372-T1CBS51388_004372-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000253
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:554689..556273 +
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