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CBS51388_004403-T1, CBS51388_004403-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004403-T1
Unique NameCBS51388_004403-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:660494..662273+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004403-T1 ID=CBS51388_004403-T1|Name=CBS51388_004403-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1780bp|location=Sequence derived from alignment at An07:660494..662273+ (Aspergillus niger CBS 513.88)
ATGCAAGGTCCTCTATACATCGGCTTCGACCTCTCAACCCAACAACTCAA
GGGCCTCGTCGTCAATTCCGACCTCAAGGTCGTTTATGTCTCCAAATTTG
ACTTCGACGCCGACTCCCACGGCTTTCCCATCAAGAAGGGTGTGCTCACC
AATGAAGCCGAACATGAGGTCTTCGCCCCCGTTGCCCTGTGGCTGCAGGC
CCTGGATGGCGTCCTAGAAGGGCTGCGTAAACAGGGCATGGACTTCAGCC
AGATCAAGGGTATCAGTGGTGCGGGACAGCAACATGGAAGTGTGTACTGG
GGAGAAAATGCGGAGAAGCTGTTGAAGGAATTGGATGCAAGCAAGACACT
TGAGGAGCAGCTGGACGGGGCGTTCTCGCACCCGTTCAGTCCTAACTGGC
AGGACTCGAGCACTCAGAAGGAGTGTGATGAGTTTGATGCCGCTCTCGGT
GGCCAGAGCGAGCTGGCGTTTGCCACAGGAAGCAAGGCACACCATGTGAG
TATTCATCCCACAATAGTCTCCATGATTGTAGAGGGGTCTAGCAATTGCT
AATTTTGTGTAGAGATTTACAGGCCCGCAGATCATGCGTTTCCAGAGGAA
GTACCCTGATGTTTACAAGAAGACGTCGCGGATCTCGCTGGTATCCTCGT
TCATTGCGTCCCTGTTCTTGGGTCACATTGCTCCGATGGACATCTCTGAT
GTCTGCGGTATGAACCTTTGGAACATCAAGAAGGGTGCCTACGATGAGAA
GCTCCTTCAGCTTTGCGCCGGCTCATCTGGAGTCGATGACCTGAAGCGCA
AGCTGGGTGATGTCCCGGAAGATGGAGGCATTCATCTCGGCCCAATTGAT
CGGTACTACGTTGAACGCTACGGCTTCAGCCCCGACTGTACGATTATCCC
CGCCACCGGTGACAACCCTGCCACCATTCTTGCTCTGCCCCTACGAGCCT
CCGATGCTATGGTATCTCTGGGCACTTCGACCACCTTCCTCATGTCCACG
CCCAGCTACAAGCCTGATCCGGCAACTCATTTCTTCAACCACCCTACCAC
TGCGGGCCTGTACATGTTCATGCTTTGCTACAAGAACGGTGGACTGGCTC
GCGAGCTGGTCCGTGATGCAGTTAACGAGAAACTCGGCGAGAAGCCGTCT
ACTTCTTGGGCCAACTTCGACAAAGTCACCCTGGAGACCCCGCCCATGGG
CCAAAAGGCCGACTCCGACCCAATGAAGCTGGGCCTGTTCTTTCCCCGTC
CGGAGATTGTGCCAAACCTGCGCTCGGGTCAGTGGCGCTTTGATTACAAC
CCAAAGGATGGCAGTCTGCAGCCCTCGAATGGCGGCTGGGATGAGCCTTT
TGACGAGGCTCGGGCCATTGTCGAGAGCCAGATGCTGTCATTGCGTCTGC
GGTCCCGTGGCCTTACTCAGAGCCCTGGTGAGGGCATTCCTGCGCAACCA
CGTCGGGTGTACCTGGTTGGCGGTGGATCGAAGAACAAGGCCATTGCTAA
AGTGGCTGGAGAGATCTTGGGTGGTAGTGAAGGAGTGTATAAGCTGGAGA
TTGGTGATAACGCGTGTGCGTTGGGTGCGGCGTATAAGGCGGTTTGGGCC
ATGGAACGAGCTGAGGGACAGACTTTCGAAGACTTGATCGGAAAACGGTG
GCATGAGGAGGAGTTCATTGAAAAGATTGCAGATGGTTACCAGCCTGGAG
TGTTTGAGCGCTACGGCCAGGCTGCAGAGGGCTTTGAGAAAATGGAGCTG
GAGGTGCTGCGCCAGGAAGGGAAGCACTGA
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Coding sequence (CDS) from alignment at An07:660494..662273+

>CBS51388_004403-T1 ID=CBS51388_004403-T1|Name=CBS51388_004403-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3426bp|location=Sequence derived from alignment at An07:660494..662273+ (Aspergillus niger CBS 513.88)
ATGCAAGGTCCTCTATACATCGGCTTCGACCTCTCAACCCAACAACTCAA
GGGCCTCGTCGTCAATTCCGACCTCAAGGTCGTTTATGTCTCCAAATTTG
ACTTCGACGCCGACTCCCACGGCTTTCCCATCAAGAAGGGTGTGCTCACC
AATGAAGCCGAACATGAGGTCTTCGCCCCCGTTGCCCTGTGGCTGCAGGC
CCTGGATGGCGTCCTAGAAGGGCTGCGTAAACAGGGCATGGACTTCAGCC
AGATCAAGGGTATCAGTGGTGCGGGACAGCAACATGGAAGTGTGTACTGG
GGAGAAAATGCGGAGAAGCTGTTGAAGGAATTGGATGCAAGCAAGACACT
TGAGGAGCAGCTGGACGGGGCGTTCTCGCACCCGTTCAGTCCTAACTGGC
AGGACTCGAGCACTCAGAAGGAGTGTGATGAGTTTGATGCCGCTCTCGGT
GGCCAGAGCGAGCTGGCGTTTGCCACAGGAAGCAAGGCACACCATAGATT
TACAGGCCCGCAGATCATGCGTTTCCAGAGGAAGTACCCTGATGTTTACA
AGAAGACGTCGCGGATCTCGCTGGTATCCTCGTTCATTGCGTCCCTGTTC
TTGGGTCACATTGCTCCGATGGACATCTCTGATGTCTGCGGTATGAACCT
TTGGAACATCAAGAAGGGTGCCTACGATGAGAAGCTCCTTCAGCTTTGCG
CCGGCTCATCTGGAGTCGATGACCTGAAGCGCAAGCTGGGTGATGTCCCG
GAAGATGGAGGCATTCATCTCGGCCCAATTGATCGGTACTACGTTGAACG
CTACGGCTTCAGCCCCGACTGTACGATTATCCCCGCCACCGGTGACAACC
CTGCCACCATTCTTGCTCTGCCCCTACGAGCCTCCGATGCTATGGTATCT
CTGGGCACTTCGACCACCTTCCTCATGTCCACGCCCAGCTACAAGCCTGA
TCCGGCAACTCATTTCTTCAACCACCCTACCACTGCGGGCCTGTACATGT
TCATGCTTTGCTACAAGAACGGTGGACTGGCTCGCGAGCTGGTCCGTGAT
GCAGTTAACGAGAAACTCGGCGAGAAGCCGTCTACTTCTTGGGCCAACTT
CGACAAAGTCACCCTGGAGACCCCGCCCATGGGCCAAAAGGCCGACTCCG
ACCCAATGAAGCTGGGCCTGTTCTTTCCCCGTCCGGAGATTGTGCCAAAC
CTGCGCTCGGGTCAGTGGCGCTTTGATTACAACCCAAAGGATGGCAGTCT
GCAGCCCTCGAATGGCGGCTGGGATGAGCCTTTTGACGAGGCTCGGGCCA
TTGTCGAGAGCCAGATGCTGTCATTGCGTCTGCGGTCCCGTGGCCTTACT
CAGAGCCCTGGTGAGGGCATTCCTGCGCAACCACGTCGGGTGTACCTGGT
TGGCGGTGGATCGAAGAACAAGGCCATTGCTAAAGTGGCTGGAGAGATCT
TGGGTGGTAGTGAAGGAGTGTATAAGCTGGAGATTGGTGATAACGCGTGT
GCGTTGGGTGCGGCGTATAAGGCGGTTTGGGCCATGGAACGAGCTGAGGG
ACAGACTTTCGAAGACTTGATCGGAAAACGGTGGCATGAGGAGGAGTTCA
TTGAAAAGATTGCAGATGGTTACCAGCCTGGAGTGTTTGAGCGCTACGGC
CAGGCTGCAGAGGGCTTTGAGAAAATGGAGCTGGAGGTGCTGCGCCAGGA
AGGGAAGCACTGAATGCAAGGTCCTCTATACATCGGCTTCGACCTCTCAA
CCCAACAACTCAAGGGCCTCGTCGTCAATTCCGACCTCAAGGTCGTTTAT
GTCTCCAAATTTGACTTCGACGCCGACTCCCACGGCTTTCCCATCAAGAA
GGGTGTGCTCACCAATGAAGCCGAACATGAGGTCTTCGCCCCCGTTGCCC
TGTGGCTGCAGGCCCTGGATGGCGTCCTAGAAGGGCTGCGTAAACAGGGC
ATGGACTTCAGCCAGATCAAGGGTATCAGTGGTGCGGGACAGCAACATGG
AAGTGTGTACTGGGGAGAAAATGCGGAGAAGCTGTTGAAGGAATTGGATG
CAAGCAAGACACTTGAGGAGCAGCTGGACGGGGCGTTCTCGCACCCGTTC
AGTCCTAACTGGCAGGACTCGAGCACTCAGAAGGAGTGTGATGAGTTTGA
TGCCGCTCTCGGTGGCCAGAGCGAGCTGGCGTTTGCCACAGGAAGCAAGG
CACACCATAGATTTACAGGCCCGCAGATCATGCGTTTCCAGAGGAAGTAC
CCTGATGTTTACAAGAAGACGTCGCGGATCTCGCTGGTATCCTCGTTCAT
TGCGTCCCTGTTCTTGGGTCACATTGCTCCGATGGACATCTCTGATGTCT
GCGGTATGAACCTTTGGAACATCAAGAAGGGTGCCTACGATGAGAAGCTC
CTTCAGCTTTGCGCCGGCTCATCTGGAGTCGATGACCTGAAGCGCAAGCT
GGGTGATGTCCCGGAAGATGGAGGCATTCATCTCGGCCCAATTGATCGGT
ACTACGTTGAACGCTACGGCTTCAGCCCCGACTGTACGATTATCCCCGCC
ACCGGTGACAACCCTGCCACCATTCTTGCTCTGCCCCTACGAGCCTCCGA
TGCTATGGTATCTCTGGGCACTTCGACCACCTTCCTCATGTCCACGCCCA
GCTACAAGCCTGATCCGGCAACTCATTTCTTCAACCACCCTACCACTGCG
GGCCTGTACATGTTCATGCTTTGCTACAAGAACGGTGGACTGGCTCGCGA
GCTGGTCCGTGATGCAGTTAACGAGAAACTCGGCGAGAAGCCGTCTACTT
CTTGGGCCAACTTCGACAAAGTCACCCTGGAGACCCCGCCCATGGGCCAA
AAGGCCGACTCCGACCCAATGAAGCTGGGCCTGTTCTTTCCCCGTCCGGA
GATTGTGCCAAACCTGCGCTCGGGTCAGTGGCGCTTTGATTACAACCCAA
AGGATGGCAGTCTGCAGCCCTCGAATGGCGGCTGGGATGAGCCTTTTGAC
GAGGCTCGGGCCATTGTCGAGAGCCAGATGCTGTCATTGCGTCTGCGGTC
CCGTGGCCTTACTCAGAGCCCTGGTGAGGGCATTCCTGCGCAACCACGTC
GGGTGTACCTGGTTGGCGGTGGATCGAAGAACAAGGCCATTGCTAAAGTG
GCTGGAGAGATCTTGGGTGGTAGTGAAGGAGTGTATAAGCTGGAGATTGG
TGATAACGCGTGTGCGTTGGGTGCGGCGTATAAGGCGGTTTGGGCCATGG
AACGAGCTGAGGGACAGACTTTCGAAGACTTGATCGGAAAACGGTGGCAT
GAGGAGGAGTTCATTGAAAAGATTGCAGATGGTTACCAGCCTGGAGTGTT
TGAGCGCTACGGCCAGGCTGCAGAGGGCTTTGAGAAAATGGAGCTGGAGG
TGCTGCGCCAGGAAGGGAAGCACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042732D-xylose metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004856xylulokinase activity
GO:0016773phosphotransferase activity, alcohol group as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004403CBS51388_004403Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004403-T1.exon1CBS51388_004403-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004403-T1.exon2CBS51388_004403-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004403-T1.cdsCBS51388_004403-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004403-T1CBS51388_004403-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261HZD
DBxrefInterPro:IPR043129
DBxrefInterPro:IPR042024
DBxrefInterPro:IPR018485
DBxrefInterPro:IPR018484
DBxrefPFAM:PF00370
DBxrefPFAM:PF02782
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:660494..662273 +
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