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CBS51388_004412-T1, CBS51388_004412-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004412-T1
Unique NameCBS51388_004412-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:694645..696128-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004412-T1 ID=CBS51388_004412-T1|Name=CBS51388_004412-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1484bp|location=Sequence derived from alignment at An07:694645..696128- (Aspergillus niger CBS 513.88)
ATGGCCATGGATCCCGATCTTACTCGCCCACTCTTGATCTCATCTAGCAG
TACAATACACCATGCATCTGTTCCAGTGAGCCCCGCTTCTGAGAATGATA
CTCCGCCCTCCAACGCGGTCACCGTCGCCCTGCGATGGAACGAGTCAAAG
ACTATGATATGGAGAGTACTAGCTACTTTCTGCGGTGCACTGGTCATGGG
CGCCAATGATGCAGCATATGGGGCGATAATCCCTTACGTTTGTACCACCT
CCTAAACGCCCAGCGAACACGTACATACAGTGCTAATCCAGACTGCTTGC
AACATCTAGCTCCAGCTTGCCTACAACAAGAGCTATACTATCATTTCCCT
AGTATTCCTGTCCCCATTTCTGGGCTACACCATCTCCGCTGTCGTTAGTA
ATCTGATCCACCAGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCCCA
GCATGTCACTTGCTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTTCC
AGTGCTGGTGATAATGTACATCTTTGTTGGACTTGGCAGCGGGATTCAGA
ATGCCGGGTGGAATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAGTC
CTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCCTT
TATTGCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATACT
ATTACCTTCTGGTAGGTAGACTGGACCTTTCCGACGACCTATTGTCTTCT
GCCAATTCTAATGCGAATCCAAGACGGGGGCTGCGGTTTTAGAACTCGTC
AACGCCACCAGCGCCTTTTGGTCAGAGACTGTATCCAAGTATCAACAGGA
TCATCCGTCTTCTGCTGATAGAGATAACGGTGGGTCTCTCAACCAGACCC
GACTATCACTCATGTACAGAGTCACCTGGATCTGTTCTATCTTTCTCTTC
CTGTATGGCGGCATCGAGGTCGCTATCGGAGGTTGGATCGTCGTATTCAT
GACCAGTGTCCGCCATGGCAGCCCCTTTGCATCTGGTATGGCTGGAACAG
GCTTCTGGCTCGGCGTCACGCTGGGCCGCTTCGTACTGGGGTTCGTCACA
CCTCGCATCGGAGAGAAAATATCGATTATCGTGTACATTTTGCTTGCTAT
TGCGCTTGAATTGGTCTTCTGGCTCGTTCCGGAGTTTATCGTCTCGGCGG
TAGCGGTTGCACTGGTTGGGTTCTTCTTGGGAACCATTTTCCCCGGCGTT
GTGGTGGTTGCTACTCGGTTGTTGCCAAAGCACTTGCATGTCGCAGCTAT
TGGGTTTGCAGCTGCGTTCTCTATGGGTGGGGGAGCCGTCTTTCCCTTCA
TGATCGGTGCTATTGCGCAGGCCAAGGGAGTGACAGTACTGCAGCCCATC
TTAGTGGCAATGTTGGCTGTTGCGCTGTTGATTTGGGGGACGGTACTGCG
AGCTCCGGTCCCGCAGTCACTGCATGAAGTTTGA
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Coding sequence (CDS) from alignment at An07:694645..696128-

>CBS51388_004412-T1 ID=CBS51388_004412-T1|Name=CBS51388_004412-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4050bp|location=Sequence derived from alignment at An07:694645..696128- (Aspergillus niger CBS 513.88)
ACGGGGGCTGCGGTTTTAGAACTCGTCAACGCCACCAGCGCCTTTTGGTC
AGAGACTGTATCCAAGTATCAACAGGATCATCCGTCTTCTGCTGATAGAG
ATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTC
ACCTGGATCTGTTCTATCTTTCTCTTCCTGTATGGCGGCATCGAGGTCGC
TATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCATGGCAGCC
CCTTTGCATCTGGTATGGCTGGAACAGGCTTCTGGCTCGGCGTCACGCTG
GGCCGCTTCGTACTGGGGTTCGTCACACCTCGCATCGGAGAGAAAATATC
GATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTCTTCTGGC
TCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTC
TTCTTGGGAACCATTTTCCCCGGCGTTGTGGTGGTTGCTACTCGGTTGTT
GCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCGTTCTCTA
TGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCC
AAGGGAGTGACAGTACTGCAGCCCATCTTAGTGGCAATGTTGGCTGTTGC
GCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAGTCACTGC
ATGAAGTTTGACTCCAGCTTGCCTACAACAAGAGCTATACTATCATTTCC
CTAGTATTCCTGTCCCCATTTCTGGGCTACACCATCTCCGCTGTCGTTAG
TAATCTGATCCACCAGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCC
CAGCATGTCACTTGCTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTT
CCAGTGCTGGTGATAATGTACATCTTTGTTGGACTTGGCAGCGGGATTCA
GAATGCCGGGTGGAATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAG
TCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCC
TTTATTGCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATA
CTATTACCTTCTGATGGCCATGGATCCCGATCTTACTCGCCCACTCTTGA
TCTCATCTAGCAGTACAATACACCATGCATCTGTTCCAGTGAGCCCCGCT
TCTGAGAATGATACTCCGCCCTCCAACGCGGTCACCGTCGCCCTGCGATG
GAACGAGTCAAAGACTATGATATGGAGAGTACTAGCTACTTTCTGCGGTG
CACTGGTCATGGGCGCCAATGATGCAGCATATGGGGCGATAATCCCTTAC
ACGGGGGCTGCGGTTTTAGAACTCGTCAACGCCACCAGCGCCTTTTGGTC
AGAGACTGTATCCAAGTATCAACAGGATCATCCGTCTTCTGCTGATAGAG
ATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTC
ACCTGGATCTGTTCTATCTTTCTCTTCCTGTATGGCGGCATCGAGGTCGC
TATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCATGGCAGCC
CCTTTGCATCTGGTATGGCTGGAACAGGCTTCTGGCTCGGCGTCACGCTG
GGCCGCTTCGTACTGGGGTTCGTCACACCTCGCATCGGAGAGAAAATATC
GATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTCTTCTGGC
TCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTC
TTCTTGGGAACCATTTTCCCCGGCGTTGTGGTGGTTGCTACTCGGTTGTT
GCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCGTTCTCTA
TGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCC
AAGGGAGTGACAGTACTGCAGCCCATCTTAGTGGCAATGTTGGCTGTTGC
GCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAGTCACTGC
ATGAAGTTTGACTCCAGCTTGCCTACAACAAGAGCTATACTATCATTTCC
CTAGTATTCCTGTCCCCATTTCTGGGCTACACCATCTCCGCTGTCGTTAG
TAATCTGATCCACCAGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCC
CAGCATGTCACTTGCTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTT
CCAGTGCTGGTGATAATGTACATCTTTGTTGGACTTGGCAGCGGGATTCA
GAATGCCGGGTGGAATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAG
TCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCC
TTTATTGCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATA
CTATTACCTTCTGATGGCCATGGATCCCGATCTTACTCGCCCACTCTTGA
TCTCATCTAGCAGTACAATACACCATGCATCTGTTCCAGTGAGCCCCGCT
TCTGAGAATGATACTCCGCCCTCCAACGCGGTCACCGTCGCCCTGCGATG
GAACGAGTCAAAGACTATGATATGGAGAGTACTAGCTACTTTCTGCGGTG
CACTGGTCATGGGCGCCAATGATGCAGCATATGGGGCGATAATCCCTTAC
ACGGGGGCTGCGGTTTTAGAACTCGTCAACGCCACCAGCGCCTTTTGGTC
AGAGACTGTATCCAAGTATCAACAGGATCATCCGTCTTCTGCTGATAGAG
ATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTC
ACCTGGATCTGTTCTATCTTTCTCTTCCTGTATGGCGGCATCGAGGTCGC
TATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCATGGCAGCC
CCTTTGCATCTGGTATGGCTGGAACAGGCTTCTGGCTCGGCGTCACGCTG
GGCCGCTTCGTACTGGGGTTCGTCACACCTCGCATCGGAGAGAAAATATC
GATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTCTTCTGGC
TCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTC
TTCTTGGGAACCATTTTCCCCGGCGTTGTGGTGGTTGCTACTCGGTTGTT
GCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCGTTCTCTA
TGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCC
AAGGGAGTGACAGTACTGCAGCCCATCTTAGTGGCAATGTTGGCTGTTGC
GCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAGTCACTGC
ATGAAGTTTGACTCCAGCTTGCCTACAACAAGAGCTATACTATCATTTCC
CTAGTATTCCTGTCCCCATTTCTGGGCTACACCATCTCCGCTGTCGTTAG
TAATCTGATCCACCAGCGCCTTGGTCGTCGTGGCGTGGCGTTCATCGGCC
CAGCATGTCACTTGCTTGCCTTTGCTGTCATCTCAACAAATCCCCCTTTT
CCAGTGCTGGTGATAATGTACATCTTTGTTGGACTTGGCAGCGGGATTCA
GAATGCCGGGTGGAATGTGTGGATCAGCAGTATGGCCAACTCTCACGAAG
TCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCC
TTTATTGCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATA
CTATTACCTTCTGATGGCCATGGATCCCGATCTTACTCGCCCACTCTTGA
TCTCATCTAGCAGTACAATACACCATGCATCTGTTCCAGTGAGCCCCGCT
TCTGAGAATGATACTCCGCCCTCCAACGCGGTCACCGTCGCCCTGCGATG
GAACGAGTCAAAGACTATGATATGGAGAGTACTAGCTACTTTCTGCGGTG
CACTGGTCATGGGCGCCAATGATGCAGCATATGGGGCGATAATCCCTTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004412CBS51388_004412Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004412-T1CBS51388_004412-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004412-T1.cdsCBS51388_004412-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004412-T1.exon3CBS51388_004412-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004412-T1.exon2CBS51388_004412-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004412-T1.exon1CBS51388_004412-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:694645..696128 -
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