You are here

Home

CBS51388_004423-T1, CBS51388_004423-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004423-T1
Unique NameCBS51388_004423-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:724360..726042-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004423-T1 ID=CBS51388_004423-T1|Name=CBS51388_004423-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1683bp|location=Sequence derived from alignment at An07:724360..726042- (Aspergillus niger CBS 513.88)
ATGTCTCAGGTTGATGTAGAATTGGGCGAGCTGCTGGCCGAGGGGCTGCC
GGCCCCCGTCCAGCTCACCATTCGCCATGTCTCCTCGACTCCCTCCCCTT
CAACCGCGCTCTTTGCCGCGCCTCCCGGGGAGACACCGGAGCCTACCTTT
TGCGAAAACCACTTTCTGTCGGCCTCGGTCAATTTAGAGGAGAAAGATGG
TGCAGAGGTGATTGTCTTTGGCATGGAGGTGCTGGTGTACAGCACTGCGC
ACCTGACCACCATCTTCGTTTCCAAGGCCGACTCCACCGGCTACCTTCAT
CTCCTGCCCAATGCGCCCAAGGTTTCCATTTTGCGGCGCATCTCTCAGAC
CTTTCTCTCCTTTTTGGTCAAAGCCCATCAAAGACCGGGTGTCAGATTGC
TAGTCTCCCTTTTTGCCCGGGCGCAGAACCAATACCTGTTTCCCGGTAGC
ATTGACAATCCTCAGAAGCATGTCCTAGATGACCGCGGCCTGATCAAATG
GTGGTGCCGCGTCGTCGACCCCATCTTGCGCGAGTATGAGCCAGAGTCCG
GTTCGCATGACAAAGGGGCCCAGGACCATCAGACAGAGTCGGCCAAAAGC
TCAGCAACCGCTTTCCTGATCGTCCCGGGATGTGATCGGTTCGAAACCAG
GGGCTTCTTTCCTCCTTTGGCCAGATTGGACGACAAGGACCGTCCAAGAT
GGCTCACCAGCTATCCTGTGCACCAATTGTGTGACAATCCCAAGGCGCCC
CCGCGTTGCTTGGTTCCCCGGTTTCCGGATGACCCCAAAACTCGCTTCTT
GGTGGACTTAGATGATGAGCTTCCGAAGCAGGAAGCGGACGGAACATCCC
CAGAGAATGCGGGTCAATGGCGGAGTGTTAGATCTCTGGACCAATTCTGG
GAGATGATGTCGTTCCGACAAGAATGCTCAGCTGGAAGACTCGTTGGGTT
CTTGTGGCTTGTTATCAATCCTCCTGGACTTGTGAACTCGGTACAAATGA
CTAGTTCTCGGTCTGTCCTTGGCGATTCCAAGAGCCTGACGGACCATGTG
TCCCAGGTGATGTCTGGCGAAAGTGTGACAAATACAAAGCCGGCTAGTGA
TGCTGCATCCGCTCCAGAGCATCCTACGACAACAGACCGTGACAAGCAAC
TGTCATCAGAACCTACGGGTGAATCTACTTCTACTTCAGCACCCCAGCCA
GGTGCTATACTATTTGAGGCTAAAACTCAGCCCCCGCAACCTGCGGATGC
TGATGCCTTTTACTGGCCCGAGGCTGGACGAGGACATGCTGTTCTGAGCG
AAGCAGACTACAAAACGGCGATCGACTTCCTGCTTGAACAGGATTTTGAC
AGTGAAGAGGCCTCAATTGCCAGCACAAAGGCATGGGGCGAAAAGGTAGC
CTCCCTCGCAGATCAACTCTGGGTTGGACAGGTGGTGGTGGGACGAAACA
CGAAGGATGAATCCTCCCAAAAGCCTGTGGAGGCTAGTACGCTCATGACC
ACCGGACTGGTTCGCAAGCGCAAGAAAGCCGATGCAGAAGTTGAGCAGAA
CAGCAAGACAGGGGAGGAGGGTGGTAATGCTGGAGCATCAACGGCGGCTC
CTCCGGCATCTTCTGGGTCGGACCCATCGCCGGCCGTCAACGTTCTCCAC
GCCAACTTGATCCGGAAGAAGAAAAAGACGTAA
back to top

Coding sequence (CDS) from alignment at An07:724360..726042-

>CBS51388_004423-T1 ID=CBS51388_004423-T1|Name=CBS51388_004423-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1683bp|location=Sequence derived from alignment at An07:724360..726042- (Aspergillus niger CBS 513.88)
ATGTCTCAGGTTGATGTAGAATTGGGCGAGCTGCTGGCCGAGGGGCTGCC
GGCCCCCGTCCAGCTCACCATTCGCCATGTCTCCTCGACTCCCTCCCCTT
CAACCGCGCTCTTTGCCGCGCCTCCCGGGGAGACACCGGAGCCTACCTTT
TGCGAAAACCACTTTCTGTCGGCCTCGGTCAATTTAGAGGAGAAAGATGG
TGCAGAGGTGATTGTCTTTGGCATGGAGGTGCTGGTGTACAGCACTGCGC
ACCTGACCACCATCTTCGTTTCCAAGGCCGACTCCACCGGCTACCTTCAT
CTCCTGCCCAATGCGCCCAAGGTTTCCATTTTGCGGCGCATCTCTCAGAC
CTTTCTCTCCTTTTTGGTCAAAGCCCATCAAAGACCGGGTGTCAGATTGC
TAGTCTCCCTTTTTGCCCGGGCGCAGAACCAATACCTGTTTCCCGGTAGC
ATTGACAATCCTCAGAAGCATGTCCTAGATGACCGCGGCCTGATCAAATG
GTGGTGCCGCGTCGTCGACCCCATCTTGCGCGAGTATGAGCCAGAGTCCG
GTTCGCATGACAAAGGGGCCCAGGACCATCAGACAGAGTCGGCCAAAAGC
TCAGCAACCGCTTTCCTGATCGTCCCGGGATGTGATCGGTTCGAAACCAG
GGGCTTCTTTCCTCCTTTGGCCAGATTGGACGACAAGGACCGTCCAAGAT
GGCTCACCAGCTATCCTGTGCACCAATTGTGTGACAATCCCAAGGCGCCC
CCGCGTTGCTTGGTTCCCCGGTTTCCGGATGACCCCAAAACTCGCTTCTT
GGTGGACTTAGATGATGAGCTTCCGAAGCAGGAAGCGGACGGAACATCCC
CAGAGAATGCGGGTCAATGGCGGAGTGTTAGATCTCTGGACCAATTCTGG
GAGATGATGTCGTTCCGACAAGAATGCTCAGCTGGAAGACTCGTTGGGTT
CTTGTGGCTTGTTATCAATCCTCCTGGACTTGTGAACTCGGTACAAATGA
CTAGTTCTCGGTCTGTCCTTGGCGATTCCAAGAGCCTGACGGACCATGTG
TCCCAGGTGATGTCTGGCGAAAGTGTGACAAATACAAAGCCGGCTAGTGA
TGCTGCATCCGCTCCAGAGCATCCTACGACAACAGACCGTGACAAGCAAC
TGTCATCAGAACCTACGGGTGAATCTACTTCTACTTCAGCACCCCAGCCA
GGTGCTATACTATTTGAGGCTAAAACTCAGCCCCCGCAACCTGCGGATGC
TGATGCCTTTTACTGGCCCGAGGCTGGACGAGGACATGCTGTTCTGAGCG
AAGCAGACTACAAAACGGCGATCGACTTCCTGCTTGAACAGGATTTTGAC
AGTGAAGAGGCCTCAATTGCCAGCACAAAGGCATGGGGCGAAAAGGTAGC
CTCCCTCGCAGATCAACTCTGGGTTGGACAGGTGGTGGTGGGACGAAACA
CGAAGGATGAATCCTCCCAAAAGCCTGTGGAGGCTAGTACGCTCATGACC
ACCGGACTGGTTCGCAAGCGCAAGAAAGCCGATGCAGAAGTTGAGCAGAA
CAGCAAGACAGGGGAGGAGGGTGGTAATGCTGGAGCATCAACGGCGGCTC
CTCCGGCATCTTCTGGGTCGGACCCATCGCCGGCCGTCAACGTTCTCCAC
GCCAACTTGATCCGGAAGAAGAAAAAGACGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0010484H3 histone acetyltransferase activity
GO:0004402histone acetyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0043618regulation of transcription from RNA polymerase II promoter in response to stress
GO:0006355regulation of transcription, DNA-templated
GO:0016573histone acetylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004423CBS51388_004423Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004423-T1.cdsCBS51388_004423-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004423-T1.exon1CBS51388_004423-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004423-T1CBS51388_004423-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262D4G
DBxrefInterPro:IPR016849
DBxrefInterPro:IPR013178
DBxrefPFAM:PF08214
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:724360..726042 -
Powered by Drupal