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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:875693..877705- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004468-T1 ID=CBS51388_004468-T1|Name=CBS51388_004468-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2013bp|location=Sequence derived from alignment at An07:875693..877705- (Aspergillus niger CBS 513.88)
ATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGA
TTCCTTGAAGACCGAATCACGCTACACCTACCGTCACCTACAGCTTCTCC
GTCAAAGTTCAACAGCAACCCCTCTGCGAGTGATCGCTCATATTGATCTC
GATGCCTTCTACGCACAATGTGAAATGGTACGCCTTAGGACACCCCGCAC
GGTGCCCTTAGCTGTACGACAATGGGACTCGCTCATTGCGATCAACTATC
CGGCACGATCCTTCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAG
AAGCTGTGTCCGGAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGG
AGAAGGTGGGAAATGGGCATACAGAAACGATGCGTTCAAGCGGATGAATA
CCGACAAGGTGTGTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTG
AAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGG
TGAACACGGAGCTGGTGCGCAATCTCCCATACAGCACGCTGGTCTTGAGA
AAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGT
GTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGA
TCGAGTCACTCCGCTTCCTGTCCCACCTACGACTGCGTTGGAGTGGAACT
CGGAGGATTGCTTGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGAT
CCTGACTGGGATGACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTC
GGTCAGGGCAGCTGTTTGGGATCGGCTCCAATACACTTGCTCTGCGGGTG
TTGCGAAGAACAAAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCG
AACAAGCAGACTATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGG
CTACAAATTTACAAAGATTAGGATGCTTGGGGGTAAACTTGGTGACCAGG
TTACTGCAATGTTTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCG
CTGGAGCAATTTCGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTA
TGGAATCATCCGGGGAGAAGACAAAAGTGAGGTCAATTCGCGGACCCAAA
TCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTT
GATCAGGCAGACAAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCG
CCTTGTTGAGGATGGCGTTCTTGAGCACAAGCGCCGCCCGAAAACAGTTG
CCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATT
CCCGGATCAGTACCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAAC
ACTCTTCCGACAGGTGATGACAGATGGACGCGCATGGCCGTGTGCCAATC
TTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCA
ATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAA
AAGGGATCTGGTGGCTGAAGAGTCGTCGGATGCTCCGCAACCTGATGAGA
AACGCAGGAAACTGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCG
CCGGAGACTGACCTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATAT
GGAAACTGAAATTGATGAGCATGCAGGTTCTGTCATCCAGGCCAAGGAGC
TCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGC
TGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCA
CTTTGCCAAAGACCTGGCAGATGAAGAACGACAGGCATCCAGCGGCCCTC
AACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAAT
AAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCT
TAGATTTGGATAA back to topCoding sequence (CDS) from alignment at An07:875693..877705- >CBS51388_004468-T1 ID=CBS51388_004468-T1|Name=CBS51388_004468-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2013bp|location=Sequence derived from alignment at An07:875693..877705- (Aspergillus niger CBS 513.88)
ATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGA
TTCCTTGAAGACCGAATCACGCTACACCTACCGTCACCTACAGCTTCTCC
GTCAAAGTTCAACAGCAACCCCTCTGCGAGTGATCGCTCATATTGATCTC
GATGCCTTCTACGCACAATGTGAAATGGTACGCCTTAGGACACCCCGCAC
GGTGCCCTTAGCTGTACGACAATGGGACTCGCTCATTGCGATCAACTATC
CGGCACGATCCTTCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAG
AAGCTGTGTCCGGAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGG
AGAAGGTGGGAAATGGGCATACAGAAACGATGCGTTCAAGCGGATGAATA
CCGACAAGGTGTGTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTG
AAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGG
TGAACACGGAGCTGGTGCGCAATCTCCCATACAGCACGCTGGTCTTGAGA
AAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGT
GTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGA
TCGAGTCACTCCGCTTCCTGTCCCACCTACGACTGCGTTGGAGTGGAACT
CGGAGGATTGCTTGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGAT
CCTGACTGGGATGACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTC
GGTCAGGGCAGCTGTTTGGGATCGGCTCCAATACACTTGCTCTGCGGGTG
TTGCGAAGAACAAAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCG
AACAAGCAGACTATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGG
CTACAAATTTACAAAGATTAGGATGCTTGGGGGTAAACTTGGTGACCAGG
TTACTGCAATGTTTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCG
CTGGAGCAATTTCGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTA
TGGAATCATCCGGGGAGAAGACAAAAGTGAGGTCAATTCGCGGACCCAAA
TCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTT
GATCAGGCAGACAAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCG
CCTTGTTGAGGATGGCGTTCTTGAGCACAAGCGCCGCCCGAAAACAGTTG
CCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATT
CCCGGATCAGTACCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAAC
ACTCTTCCGACAGGTGATGACAGATGGACGCGCATGGCCGTGTGCCAATC
TTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCA
ATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAA
AAGGGATCTGGTGGCTGAAGAGTCGTCGGATGCTCCGCAACCTGATGAGA
AACGCAGGAAACTGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCG
CCGGAGACTGACCTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATAT
GGAAACTGAAATTGATGAGCATGCAGGTTCTGTCATCCAGGCCAAGGAGC
TCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGC
TGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCA
CTTTGCCAAAGACCTGGCAGATGAAGAACGACAGGCATCCAGCGGCCCTC
AACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAAT
AAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCT
TAGATTTGGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003684 | damaged DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261801 |
| DBxref | InterPro:IPR043502 |
| DBxref | InterPro:IPR001126 |
| DBxref | InterPro:IPR036775 |
| DBxref | InterPro:IPR043128 |
| DBxref | InterPro:IPR017961 |
| DBxref | InterPro:IPR041298 |
| DBxref | PFAM:PF18439 |
| DBxref | PFAM:PF11799 |
| DBxref | PFAM:PF00817 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:875693..877705 - |
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