|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:1650146..1652966+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004729-T1 ID=CBS51388_004729-T1|Name=CBS51388_004729-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2821bp|location=Sequence derived from alignment at An07:1650146..1652966+ (Aspergillus niger CBS 513.88)
ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCC
CATTTCCGACACCGCATCGCTCTTACATTCGTTCGATTCCATCACCAATC
CCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT
CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATC
CACGCCCGAATCCTTCCTGGTCGATGTCGGCCAGCATCTGCGCCCACAGC
TCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC
ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGA
GAGTATATATGCGGAGCTTGAACCGGGGGCCTTTTTTGGCGAAATCGGTG
TACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC
TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTT
CCCCGACGTGGAACGGGCAATTCGCGACGAGGCCCAGGAGAGACTGATGA
TCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG
AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGA
CCTGAACCTCACGGATCAGGACGGCAGAAGCTTGAAGTCCGTCAATAAAA
AGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG
GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTT
CTCCGGTTTGCCGCCAGATATCCTCCATTTCCTGGGCCTGAATGCGCAAC
CGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT
CGGGAGATCTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAG
AGCAGCAAACAATCATGCGCAATCGTTGCCAAATAAGATCGAGCACCCTA
GTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT
GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAG
TGCGGTGGAATGTCTGATGATTAGCGGTGATGTACTAGTAGAATTCTGGG
AGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG
CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAG
CGACGAGCAACCTGCCGGCGAGCTGAGTGTCGATGATAACTTCAAGATGA
GGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG
TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCG
GCCTTCCGATCCGGATCCTTTCCTCAGTGTGGGCCTAGACAAAGTCCGGC
TGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC
GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTC
GTCCTTTCTCACGCTTCCCGGGGCCGGTGAGTTCTCAACACCGTCAGAGA
CGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC
CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAG
GGCGGTCTCTATGCACTGGTCAGAGATTCTCAGCAAGTCAACGGAGCTGC
TTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA
TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGA
CATTAGCAATTGCTTCCATATAACGGACGAAGGGTTCAGCAAGTTGGTTG
CGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT
GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACA
GGAGGTTGATCTGAGCAATTGTCGAAAAGTCGGGGATACGCTCCTAGCTC
GAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG
AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGAC
CGTATACGGCTGCCCCGAACTCAAGAAATTAACCTTATCCTATTGCAAGC
ATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG
ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTT
CCAATTCTGGGGTAATGCTCGGTTCACCAATCTCCGCAGACTCTGCTTGG
CGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA
GCAAAGCAGCTGCGGGAGCTAGATTTGGTAAGCTAGATCTACAATGTCTA
AGTGACGACGGACTAACAATTGGCAGTCGTTCTGTTGTGCTCTGTCCGAC
ACGGCTACAGAAGTACTTGCTCTGCAATGTTCGCAACTGACCTACCTCAA
TATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATCG
GCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCGG
GTAACCGGTGCCGGTGTTGAGGCGGTTGCAGACGGCTGCAACCAACTGAC
ATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGCG
ACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCAA
AACGGAAGGGTCTTTCGCTGA back to topCoding sequence (CDS) from alignment at An07:1650146..1652966+ >CBS51388_004729-T1 ID=CBS51388_004729-T1|Name=CBS51388_004729-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5544bp|location=Sequence derived from alignment at An07:1650146..1652966+ (Aspergillus niger CBS 513.88)
ATGCGGCGCCATGGCAGAGCTAGTGGTGGCTCAACAAAAGCCGTTCACCC
CATTTCCGACACCGCATCGCTCTTACATTCGTTCGATTCCATCACCAATC
CCAATCGTCCCGTACGACCCTCGCCCTTGACCTCTTCTAATATTCAAGCT
CTCCCGTTGGACCTCGTTGACCGATTGCGCTCCTTTCCCTTGTTTCAATC
CACGCCCGAATCCTTCCTGGTCGATGTCGGCCAGCATCTGCGCCCACAGC
TCCATGCGCCCAACGACTATATCCTGACGGAGGGGGACGAGGCCAAGGCC
ATCTACTGGCTGGTTCGGGGCGCTGTCTCCGTGACCTCGCGCGATGGCGA
GAGTATATATGCGGAGCTTGAACCGGGGGCCTTTTTTGGCGAAATCGGTG
TACTAATGGATCGTCCGCGGACAGCAACCATCATCGCCCGCACTCGATGC
TTACTGGTCGTGTTAACCAAGGAGGATTTCCGGAAAATTCTCCCTCGGTT
CCCCGACGTGGAACGGGCAATTCGCGACGAGGCCCAGGAGAGACTGATGA
TCCTGGAGAAGAAGAAGAAGGAGACCTCTGTACCATCGGTTGATTTTGTG
AGTCCGGTCAGGAGAGGCTCGAAGAGATTGCGGGACACATACTCCGGTGA
CCTGAACCTCACGGATCAGGACGGCAGAAGCTTGAAGTCCGTCAATAAAA
AGCGAAAGTCCCCGAGTCCTGGATTGGCTGATGGATCCTCCAGTGCGCTG
GCGAACGGGCTGGTTAATGTCCGTTTACTTCTCAAGGAGCTGCCCCTCTT
CTCCGGTTTGCCGCCAGATATCCTCCATTTCCTGGGCCTGAATGCGCAAC
CGCGCTCCTACCCGCCATTCACCGATATTATCAAGCAGGACTCCCAGGGT
CGGGAGATCTATTTCATTGTCCGCGGGGAGGTTGAGGTTTTGTCGGAGAG
AGCAGCAAACAATCATGCGCAATCGTTGCCAAATAAGATCGAGCACCCTA
GTTTCGAAGTTAAAGCCCGGCTGAAACAGGGACAATACTTTGGTGAAGTT
GTGAGCCTCTCCCTGGCACCACGCCGGACCGCCACCGTGCGATCCATAAG
TGCGGTGGAATGTCTGATGATTAGCGGTGATGTACTAGTAGAATTCTGGG
AGAGATGTCCTCCAAAAGTTCGCGAACAGGTGGAAAGGACCGCCAAGGAG
CGGCTTCAAGCAGCGTCTGATGGCGACGTTGTGATGTCAGAAGCGGGAAG
CGACGAGCAACCTGCCGGCGAGCTGAGTGTCGATGATAACTTCAAGATGA
GGGCGGGCCGCAGACAATCCATGCCTCTTCTAACCTTAACAGAGACTGAG
TTAGACAGCACTCCGACTGCCAAAGGTCTAGATGAACCAAGTGTGCTGCG
GCCTTCCGATCCGGATCCTTTCCTCAGTGTGGGCCTAGACAAAGTCCGGC
TGCGAAGCCGGCGCAGCTCCGTGGCGCCATTGACGCCGGAGGAGGTTTCC
GGGGAGCAACAGAGATCTTCACCCTCATCTGAGCCTAGATCTACTAGCTC
GTCCTTTCTCACGCTTCCCGGGGCCGGTGAGTTCTCAACACCGTCAGAGA
CGGTCCGTGAGCCACGTCGTGACAACCACGGGTATCTTCCCGATCGGGTC
CTGTTGGTTATATTTCAGCATCTGGAGCTTCATGATCTACTTCGCCTCAG
GGCGGTCTCTATGCACTGGTCAGAGATTCTCAGCAAGTCAACGGAGCTGC
TTCGTTACCTGGACCTGAGTACCTATAACCGGTGCGTCACGGATGACGTA
TTGGTGAAGATCATTTGCCCATTCGTAGGTAGTCGGCCGCGATATATCGA
CATTAGCAATTGCTTCCATATAACGGACGAAGGGTTCAGCAAGTTGGTTG
CGACGTGCGGATCTAACGTTGTCACCTGGAAAATGAAGAGCGTTTGGGAT
GTCACCGCATCGGCTATTCTTGACATGGCGAGCAAGGCGAACAGCCTACA
GGAGGTTGATCTGAGCAATTGTCGAAAAGTCGGGGATACGCTCCTAGCTC
GAATTGTAGGCTGGGTATCTCCTGGCCAGCATAAGCCACACGACGAGTCG
AAACCCGGGAAGGCGTCTATGAAGCCTACCAAACAGACGGCCGCCGGGAC
CGTATACGGCTGCCCCGAACTCAAGAAATTAACCTTATCCTATTGCAAGC
ATGTTACGGACCGGTCGATGCACCACATCGCATCGCACGCTGCTTCCAGG
ATCGAGCAGATGGACCTTACCCGTTGCACTACCATTACCGACCAAGGCTT
CCAATTCTGGGGTAATGCTCGGTTCACCAATCTCCGCAGACTCTGCTTGG
CGGACTGCACGTATTTGACTGACAACGCTATCGTGCATCTTACGAATGCA
GCAAAGCAGCTGCGGGAGCTAGATTTGTCGTTCTGTTGTGCTCTGTCCGA
CACGGCTACAGAAGTACTTGCTCTGCAATGTTCGCAACTGACCTACCTCA
ATATGTCTTTCTGTGGCTCCGCCATATCAGACCCATCTCTGCGCTGCATC
GGCCTGCACCTGTTACATCTTAAACGTCTTTCCGTCCGAGGCTGTGTTCG
GGTAACCGGTGCCGGTGTTGAGGCGGTTGCAGACGGCTGCAACCAACTGA
CATCCTTTGATGTCAGTCAGTGCAAGAACCTCCTCCCATGGATTGAAGGC
GACGGACCCCGCAAATACGGGAAGAAGATATCATTTGAGACTGTTGCGCA
AAACGGAAGGGTCTTTCGCTGAATGCGGCGCCATGGCAGAGCTAGTGGTG
GCTCAACAAAAGCCGTTCACCCCATTTCCGACACCGCATCGCTCTTACAT
TCGTTCGATTCCATCACCAATCCCAATCGTCCCGTACGACCCTCGCCCTT
GACCTCTTCTAATATTCAAGCTCTCCCGTTGGACCTCGTTGACCGATTGC
GCTCCTTTCCCTTGTTTCAATCCACGCCCGAATCCTTCCTGGTCGATGTC
GGCCAGCATCTGCGCCCACAGCTCCATGCGCCCAACGACTATATCCTGAC
GGAGGGGGACGAGGCCAAGGCCATCTACTGGCTGGTTCGGGGCGCTGTCT
CCGTGACCTCGCGCGATGGCGAGAGTATATATGCGGAGCTTGAACCGGGG
GCCTTTTTTGGCGAAATCGGTGTACTAATGGATCGTCCGCGGACAGCAAC
CATCATCGCCCGCACTCGATGCTTACTGGTCGTGTTAACCAAGGAGGATT
TCCGGAAAATTCTCCCTCGGTTCCCCGACGTGGAACGGGCAATTCGCGAC
GAGGCCCAGGAGAGACTGATGATCCTGGAGAAGAAGAAGAAGGAGACCTC
TGTACCATCGGTTGATTTTGTGAGTCCGGTCAGGAGAGGCTCGAAGAGAT
TGCGGGACACATACTCCGGTGACCTGAACCTCACGGATCAGGACGGCAGA
AGCTTGAAGTCCGTCAATAAAAAGCGAAAGTCCCCGAGTCCTGGATTGGC
TGATGGATCCTCCAGTGCGCTGGCGAACGGGCTGGTTAATGTCCGTTTAC
TTCTCAAGGAGCTGCCCCTCTTCTCCGGTTTGCCGCCAGATATCCTCCAT
TTCCTGGGCCTGAATGCGCAACCGCGCTCCTACCCGCCATTCACCGATAT
TATCAAGCAGGACTCCCAGGGTCGGGAGATCTATTTCATTGTCCGCGGGG
AGGTTGAGGTTTTGTCGGAGAGAGCAGCAAACAATCATGCGCAATCGTTG
CCAAATAAGATCGAGCACCCTAGTTTCGAAGTTAAAGCCCGGCTGAAACA
GGGACAATACTTTGGTGAAGTTGTGAGCCTCTCCCTGGCACCACGCCGGA
CCGCCACCGTGCGATCCATAAGTGCGGTGGAATGTCTGATGATTAGCGGT
GATGTACTAGTAGAATTCTGGGAGAGATGTCCTCCAAAAGTTCGCGAACA
GGTGGAAAGGACCGCCAAGGAGCGGCTTCAAGCAGCGTCTGATGGCGACG
TTGTGATGTCAGAAGCGGGAAGCGACGAGCAACCTGCCGGCGAGCTGAGT
GTCGATGATAACTTCAAGATGAGGGCGGGCCGCAGACAATCCATGCCTCT
TCTAACCTTAACAGAGACTGAGTTAGACAGCACTCCGACTGCCAAAGGTC
TAGATGAACCAAGTGTGCTGCGGCCTTCCGATCCGGATCCTTTCCTCAGT
GTGGGCCTAGACAAAGTCCGGCTGCGAAGCCGGCGCAGCTCCGTGGCGCC
ATTGACGCCGGAGGAGGTTTCCGGGGAGCAACAGAGATCTTCACCCTCAT
CTGAGCCTAGATCTACTAGCTCGTCCTTTCTCACGCTTCCCGGGGCCGGT
GAGTTCTCAACACCGTCAGAGACGGTCCGTGAGCCACGTCGTGACAACCA
CGGGTATCTTCCCGATCGGGTCCTGTTGGTTATATTTCAGCATCTGGAGC
TTCATGATCTACTTCGCCTCAGGGCGGTCTCTATGCACTGGTCAGAGATT
CTCAGCAAGTCAACGGAGCTGCTTCGTTACCTGGACCTGAGTACCTATAA
CCGGTGCGTCACGGATGACGTATTGGTGAAGATCATTTGCCCATTCGTAG
GTAGTCGGCCGCGATATATCGACATTAGCAATTGCTTCCATATAACGGAC
GAAGGGTTCAGCAAGTTGGTTGCGACGTGCGGATCTAACGTTGTCACCTG
GAAAATGAAGAGCGTTTGGGATGTCACCGCATCGGCTATTCTTGACATGG
CGAGCAAGGCGAACAGCCTACAGGAGGTTGATCTGAGCAATTGTCGAAAA
GTCGGGGATACGCTCCTAGCTCGAATTGTAGGCTGGGTATCTCCTGGCCA
GCATAAGCCACACGACGAGTCGAAACCCGGGAAGGCGTCTATGAAGCCTA
CCAAACAGACGGCCGCCGGGACCGTATACGGCTGCCCCGAACTCAAGAAA
TTAACCTTATCCTATTGCAAGCATGTTACGGACCGGTCGATGCACCACAT
CGCATCGCACGCTGCTTCCAGGATCGAGCAGATGGACCTTACCCGTTGCA
CTACCATTACCGACCAAGGCTTCCAATTCTGGGGTAATGCTCGGTTCACC
AATCTCCGCAGACTCTGCTTGGCGGACTGCACGTATTTGACTGACAACGC
TATCGTGCATCTTACGAATGCAGCAAAGCAGCTGCGGGAGCTAGATTTGT
CGTTCTGTTGTGCTCTGTCCGACACGGCTACAGAAGTACTTGCTCTGCAA
TGTTCGCAACTGACCTACCTCAATATGTCTTTCTGTGGCTCCGCCATATC
AGACCCATCTCTGCGCTGCATCGGCCTGCACCTGTTACATCTTAAACGTC
TTTCCGTCCGAGGCTGTGTTCGGGTAACCGGTGCCGGTGTTGAGGCGGTT
GCAGACGGCTGCAACCAACTGACATCCTTTGATGTCAGTCAGTGCAAGAA
CCTCCTCCCATGGATTGAAGGCGACGGACCCCGCAAATACGGGAAGAAGA
TATCATTTGAGACTGTTGCGCAAAACGGAAGGGTCTTTCGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018490 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR018488 |
| DBxref | InterPro:IPR001611 |
| DBxref | InterPro:IPR014710 |
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR006553 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR000595 |
| DBxref | PFAM:PF13516 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| DBxref | PFAM:PF00027 |
| DBxref | PFAM:PF16643 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:1650146..1652966 + |
|
