You are here

CBS51388_004786-T1, CBS51388_004786-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004786-T1
Unique NameCBS51388_004786-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1837473..1838090-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004786-T1 ID=CBS51388_004786-T1|Name=CBS51388_004786-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=618bp|location=Sequence derived from alignment at An07:1837473..1838090- (Aspergillus niger CBS 513.88)
ATGAAGCCCTCGGCATCTATCCCACTCTTCTTGGCTGCCTTGTCTTCGTT CTCACTGCCTGTGAGCTCCTATCGAATCTTTGAATATCAGGGGGACAAAT GCAATGGCCCAGAGATCAATGTGCATCGACTTGCGGGCCCTAGCGCTTGC ACGAGCCTGAACAGTATTACCCAGTCAGTATTCATAAAGATTGACAACAT CCACGACGACCAGTATGACGTTGTCCTCTGTTCGTCTGATTCATGCGATG GCCGAATCGTCGGCCTGATCCACAATACGAACGGATGTCTCCCTGCGGAT GTGCCAGGCTTCGGGAAGGCCCATTCGATCTGCGTGGTCCAAACTAGCAG CCAGACAAAGAAGCTTTGCCGCGCTGACGAGGAGTTGGAGTCGGACCTTG AATACAATATGGACAGCCTTCGAGAGAGGACTATCCAGAGCCCAATCTCG CCCGGAGTATTTGTCACTATCAAGAAAGAAGACCACGATGAGGATGGATT CTTTACTAGCGACCTCGCTGCGGGGTATAACGTTCCCGATCTGGAGCCTG TCCATGCCAACAGTACCCTGCTGGCGTACGAGGGCAGCGCAGTTAGCCCA TTACACCTGCAGCAGTAG
back to top

Coding sequence (CDS) from alignment at An07:1837473..1838090-

>CBS51388_004786-T1 ID=CBS51388_004786-T1|Name=CBS51388_004786-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1176bp|location=Sequence derived from alignment at An07:1837473..1838090- (Aspergillus niger CBS 513.88)
GGGGACAAATGCAATGGCCCAGAGATCAATGTGCATCGACTTGCGGGCCC
TAGCGCTTGCACGAGCCTGAACAGTATTACCCAGTCAGTATTCATAAAGA
TTGACAACATCCACGACGACCAGTATGACGTTGTCCTCTGTTCGTCTGAT
TCATGCGATGGCCGAATCGTCGGCCTGATCCACAATACGAACGGATGTCT
CCCTGCGGATGTGCCAGGCTTCGGGAAGGCCCATTCGATCTGCGTGGTCC
AAACTAGCAGCCAGACAAAGAAGCTTTGCCGCGCTGACGAGGAGTTGGAG
TCGGACCTTGAATACAATATGGACAGCCTTCGAGAGAGGACTATCCAGAG
CCCAATCTCGCCCGGAGTATTTGTCACTATCAAGAAAGAAGACCACGATG
AGGATGGATTCTTTACTAGCGACCTCGCTGCGGGGTATAACGTTCCCGAT
CTGGAGCCTGTCCATGCCAACAGTACCCTGCTGGCGTACGAGGGCAGCGC
AGTTAGCCCATTACACCTGCAGCAGTAGATGAAGCCCTCGGCATCTATCC
CACTCTTCTTGGCTGCCTTGTCTTCGTTCTCACTGCCTGGGGACAAATGC
AATGGCCCAGAGATCAATGTGCATCGACTTGCGGGCCCTAGCGCTTGCAC
GAGCCTGAACAGTATTACCCAGTCAGTATTCATAAAGATTGACAACATCC
ACGACGACCAGTATGACGTTGTCCTCTGTTCGTCTGATTCATGCGATGGC
CGAATCGTCGGCCTGATCCACAATACGAACGGATGTCTCCCTGCGGATGT
GCCAGGCTTCGGGAAGGCCCATTCGATCTGCGTGGTCCAAACTAGCAGCC
AGACAAAGAAGCTTTGCCGCGCTGACGAGGAGTTGGAGTCGGACCTTGAA
TACAATATGGACAGCCTTCGAGAGAGGACTATCCAGAGCCCAATCTCGCC
CGGAGTATTTGTCACTATCAAGAAAGAAGACCACGATGAGGATGGATTCT
TTACTAGCGACCTCGCTGCGGGGTATAACGTTCCCGATCTGGAGCCTGTC
CATGCCAACAGTACCCTGCTGGCGTACGAGGGCAGCGCAGTTAGCCCATT
ACACCTGCAGCAGTAGATGAAGCCCTCGGCATCTATCCCACTCTTCTTGG
CTGCCTTGTCTTCGTTCTCACTGCCT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004786CBS51388_004786Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004786-T1CBS51388_004786-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004786-T1.cdsCBS51388_004786-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004786-T1.exon2CBS51388_004786-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004786-T1.exon1CBS51388_004786-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1837473..1838090 -