You are here

CBS51388_004797-T1, CBS51388_004797-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004797-T1
Unique NameCBS51388_004797-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1895222..1896183+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004797-T1 ID=CBS51388_004797-T1|Name=CBS51388_004797-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=962bp|location=Sequence derived from alignment at An07:1895222..1896183+ (Aspergillus niger CBS 513.88)
ATGGCGCGCAGCAAGCAGGGGGTGTTTTCTTGGGAGGATGTGTTGGCGCA TCGCTACCAGAGTACGTATACCTTGTCCACAGTTACACTCCTAATATACT GGTAGCATATTAACCACCCATCACTCACCAGACAACAAACCATCCGGGCT CCCCAGGTCACGACGATACAGCGCCGTTCAAGGCCAACGGACGTCCTCTA AACCCGACACCAGAACGGAATGGACCATCCAATCGCAAAGCGCCCTACTG GCCAAGCTATCGCCCGAGCTGCGACTCATGATCTGGGAGATGGTCCTGGG CGGCATGCGCATCCACATCATCCAACGTCCGAACCGGCGAATGGGCCATG TAGTCTGTCCCCAGACTAGCGCATGCGATATCTGTCGCGGCGGACTCCCA GGCATCAAAGAGTCGGCGGGTCTGCTGGCGCTGTCGATGACATGTAAACA GATGTGAGTCACATCTCATATACCTACTACATAGTACAATATACTCATTG ATACTCAGCTACTGCGAGTCTATCTATATGCTCTACTCGCTCAACACCTT TGAATTCAGCAATACCTGGTCGCTGACATACCTGCGACCCACCATTCCGG CCGACTTCTGGGACGCCATCCGCGAGGTCGAACTCCGCTGGGCGTTCCCG GGCCACTGGCTCCCCTGCAAGGACCCCGTCAAGTCGGTCTACTTCTCCGC TGGCCGGCAGCAGTGGGTGGAGACGTGTCTGGCTCTCACAGACATGCAGG GCTTGCAGACGTTCACGCTGCAGCTGAGTGGGAGCTGGTTCTGCGAGCCG GTGGAAAAGATCCCGGTGTTCTTGGAACCGCTACGGGCGCTGCATCTGCG ACAGCGATGGAAGTTGCAGCTGCCGAGGCAGCCATATTATGTAAAGGAGA TTCGGAATATTGATGGGGATTTGAGAAAGCGGGGGATTGAGTGTGTGGTG AGGGTGGTTTAG
back to top

Coding sequence (CDS) from alignment at An07:1895222..1896183+

>CBS51388_004797-T1 ID=CBS51388_004797-T1|Name=CBS51388_004797-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2511bp|location=Sequence derived from alignment at An07:1895222..1896183+ (Aspergillus niger CBS 513.88)
ATGGCGCGCAGCAAGCAGGGGGTGTTTTCTTGGGAGGATGTGTTGGCGCA
TCGCTACCAGAACAACAAACCATCCGGGCTCCCCAGGTCACGACGATACA
GCGCCGTTCAAGGCCAACGGACGTCCTCTAAACCCGACACCAGAACGGAA
TGGACCATCCAATCGCAAAGCGCCCTACTGGCCAAGCTATCGCCCGAGCT
GCGACTCATGATCTGGGAGATGGTCCTGGGCGGCATGCGCATCCACATCA
TCCAACGTCCGAACCGGCGAATGGGCCATGTAGTCTGTCCCCAGACTAGC
GCATGCGATATCTGTCGCGGCGGACTCCCAGGCATCAAAGAGTCGGCGGG
TCTGCTGGCGCTGTCGATGACATGTAAACAGATCTACTGCGAGTCTATCT
ATATGCTCTACTCGCTCAACACCTTTGAATTCAGCAATACCTGGTCGCTG
ACATACCTGCGACCCACCATTCCGGCCGACTTCTGGGACGCCATCCGCGA
GGTCGAACTCCGCTGGGCGTTCCCGGGCCACTGGCTCCCCTGCAAGGACC
CCGTCAAGTCGGTCTACTTCTCCGCTGGCCGGCAGCAGTGGGTGGAGACG
TGTCTGGCTCTCACAGACATGCAGGGCTTGCAGACGTTCACGCTGCAGCT
GAGTGGGAGCTGGTTCTGCGAGCCGGTGGAAAAGATCCCGGTGTTCTTGG
AACCGCTACGGGCGCTGCATCTGCGACAGCGATGGAAGTTGCAGCTGCCG
AGGCAGCCATATTATGTAAAGGAGATTCGGAATATTGATGGGGATTTGAG
AAAGCGGGGGATTGAGTGTGTGGTGAGGGTGGTTTAGATGGCGCGCAGCA
AGCAGGGGGTGTTTTCTTGGGAGGATGTGTTGGCGCATCGCTACCAGAAC
AACAAACCATCCGGGCTCCCCAGGTCACGACGATACAGCGCCGTTCAAGG
CCAACGGACGTCCTCTAAACCCGACACCAGAACGGAATGGACCATCCAAT
CGCAAAGCGCCCTACTGGCCAAGCTATCGCCCGAGCTGCGACTCATGATC
TGGGAGATGGTCCTGGGCGGCATGCGCATCCACATCATCCAACGTCCGAA
CCGGCGAATGGGCCATGTAGTCTGTCCCCAGACTAGCGCATGCGATATCT
GTCGCGGCGGACTCCCAGGCATCAAAGAGTCGGCGGGTCTGCTGGCGCTG
TCGATGACATGTAAACAGATCTACTGCGAGTCTATCTATATGCTCTACTC
GCTCAACACCTTTGAATTCAGCAATACCTGGTCGCTGACATACCTGCGAC
CCACCATTCCGGCCGACTTCTGGGACGCCATCCGCGAGGTCGAACTCCGC
TGGGCGTTCCCGGGCCACTGGCTCCCCTGCAAGGACCCCGTCAAGTCGGT
CTACTTCTCCGCTGGCCGGCAGCAGTGGGTGGAGACGTGTCTGGCTCTCA
CAGACATGCAGGGCTTGCAGACGTTCACGCTGCAGCTGAGTGGGAGCTGG
TTCTGCGAGCCGGTGGAAAAGATCCCGGTGTTCTTGGAACCGCTACGGGC
GCTGCATCTGCGACAGCGATGGAAGTTGCAGCTGCCGAGGCAGCCATATT
ATGTAAAGGAGATTCGGAATATTGATGGGGATTTGAGAAAGCGGGGGATT
GAGTGTGTGGTGAGGGTGGTTTAGATGGCGCGCAGCAAGCAGGGGGTGTT
TTCTTGGGAGGATGTGTTGGCGCATCGCTACCAGAACAACAAACCATCCG
GGCTCCCCAGGTCACGACGATACAGCGCCGTTCAAGGCCAACGGACGTCC
TCTAAACCCGACACCAGAACGGAATGGACCATCCAATCGCAAAGCGCCCT
ACTGGCCAAGCTATCGCCCGAGCTGCGACTCATGATCTGGGAGATGGTCC
TGGGCGGCATGCGCATCCACATCATCCAACGTCCGAACCGGCGAATGGGC
CATGTAGTCTGTCCCCAGACTAGCGCATGCGATATCTGTCGCGGCGGACT
CCCAGGCATCAAAGAGTCGGCGGGTCTGCTGGCGCTGTCGATGACATGTA
AACAGATCTACTGCGAGTCTATCTATATGCTCTACTCGCTCAACACCTTT
GAATTCAGCAATACCTGGTCGCTGACATACCTGCGACCCACCATTCCGGC
CGACTTCTGGGACGCCATCCGCGAGGTCGAACTCCGCTGGGCGTTCCCGG
GCCACTGGCTCCCCTGCAAGGACCCCGTCAAGTCGGTCTACTTCTCCGCT
GGCCGGCAGCAGTGGGTGGAGACGTGTCTGGCTCTCACAGACATGCAGGG
CTTGCAGACGTTCACGCTGCAGCTGAGTGGGAGCTGGTTCTGCGAGCCGG
TGGAAAAGATCCCGGTGTTCTTGGAACCGCTACGGGCGCTGCATCTGCGA
CAGCGATGGAAGTTGCAGCTGCCGAGGCAGCCATATTATGTAAAGGAGAT
TCGGAATATTGATGGGGATTTGAGAAAGCGGGGGATTGAGTGTGTGGTGA
GGGTGGTTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004797CBS51388_004797Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004797-T1.exon1CBS51388_004797-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004797-T1.exon2CBS51388_004797-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004797-T1.exon3CBS51388_004797-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004797-T1.cdsCBS51388_004797-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004797-T1CBS51388_004797-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1895222..1896183 +