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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:2020039..2021417- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004826-T1 ID=CBS51388_004826-T1|Name=CBS51388_004826-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1379bp|location=Sequence derived from alignment at An07:2020039..2021417- (Aspergillus niger CBS 513.88)
ATGACTGCTGCGCTTGTGAATCAGCCGGCCTGGGAGGAACGGAAACAGGC
ACCCGCGGAGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTT
CCAACAATGCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAG
CTAGTCCAGCAAATATTGTCATATTTATCGGCTCAAGATCTCGCTCGCCT
GTCAACCACCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGT
GGGCCAATATCATCAACTCCAATCTTCCTGAGCCCATACACACACCAGGT
GTCTTTGACTCCTTTCGCAGTCTCTACATCGCCCACCATCCTTGCTGGTT
TATTCCTCGCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATT
TAATCCTCGCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGA
GTCATTGCAGAACGTCGCTCGCACCAATTTCAACTTTGGGACTGGAACCC
AGATGTTATTATCCAAACGTTCAATCCTAAAGTCAGTCTGTGGCTAGATG
ATCCAGTCCTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTA
CGCGGTGAGACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAA
CTCGTTTTCGCTTTGTTCCATCCGAATGACATCTGATGTTGTGGCGAACA
AACAATGGCCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGT
GAAGTTGACCCGGAGTGGGAACACCACCCCCAACAGCTGGACAGAATTTC
TGAGCATGCGTTTCGAATTAGAAGATGGGCACATTTCCGATTGGGCATGC
CGATCTTCACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTT
GACCCGGAGCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTG
GGTTGGAGACTACTCAGCACATGGATGTGAATTTCTGCTTTTCCTACAAC
GTGATCAAGGGGAAGGGCGATGCAGCCTTGAGGCTATCAAGCTCACTGGA
GACCCTAACGTTCCTCGTGGCGAAATATCGTTCTCAGCAGACGACATTGG
CCCAGGAGGATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCAC
GCATAGTAAGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATGGT
AAGTTTGATCGGAAAAGTGGCCGGACATCTCGCTTTGCAAACTAACCTGG
TTCTTAGATACGTTTATCGCATCCCAACTCATTTTGATTTCGCCAGAGTG
CGTGGCGCACTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTC
TGGACATCGATGCATTACTCCGGACATAG back to topCoding sequence (CDS) from alignment at An07:2020039..2021417- >CBS51388_004826-T1 ID=CBS51388_004826-T1|Name=CBS51388_004826-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2640bp|location=Sequence derived from alignment at An07:2020039..2021417- (Aspergillus niger CBS 513.88)
ATACGTTTATCGCATCCCAACTCATTTTGATTTCGCCAGAGTGCGTGGCG
CACTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTCTGGACAT
CGATGCATTACTCCGGACATAGATGACTGCTGCGCTTGTGAATCAGCCGG
CCTGGGAGGAACGGAAACAGGCACCCGCGGAGATGGACGACGATCCCCAG
ACGTCTTTATCGGAAACAACTTCCAACAATGCCAGAGAAATCAGCGCTCC
ATTTTTAGAGCTTCCCCCTGAGCTAGTCCAGCAAATATTGTCATATTTAT
CGGCTCAAGATCTCGCTCGCCTGTCAACCACCTGCCGCACTTTCGCTGAG
CATGCGACCAACGAGCTTTTGTGGGCCAATATCATCAACTCCAATCTTCC
TGAGCCCATACACACACCAGGTGTCTTTGACTCCTTTCGCAGTCTCTACA
TCGCCCACCATCCTTGCTGGTTTATTCCTCGCAACAAAATCTGGTTTTCG
GACACTGAGCACACGGGCAATTTAATCCTCGCCCGCTATGATCACCGACG
GGGCGTCATAGAGGCTTACCGAGTCATTGCAGAACGTCGCTCGCACCAAT
TTCAACTTTGGGACTGGAACCCAGATGTTATTATCCAAACGTTCAATCCT
AAAGTCAGTCTGTGGCTAGATGATCCAGTCCTGCTCCTTAAAAACCACCA
CGAGGGACGGCCGTTATATTTACGCGGTGAGACCCGCATGCCTATGCCCC
TCGAGACGCAGCATGTCTTCAACTCGTTTTCGCTTTGTTCCATCCGAATG
ACATCTGATGTTGTGGCGAACAAACAATGGCCTCCAATAACCATTCCAAC
CAAACACCGCGTCTATCGCGGTGAAGTTGACCCGGAGTGGGAACACCACC
CCCAACAGCTGGACAGAATTTCTGAGCATGCGTTTCGAATTAGAAGATGG
GCACATTTCCGATTGGGCATGCCGATCTTCACCGCTGGCCGGAGCGAGAC
GCTGTCGACTTATGCTACACTTGACCCGGAGCTGTATACGCCCACGGACA
AGAAACCATACCAAGGCATTTGGGTTGGAGACTACTCAGCACATGGATGT
GAATTTCTGCTTTTCCTACAACGTGATCAAGGGGAAGGGCGATGCAGCCT
TGAGGCTATCAAGCTCACTGGAGACCCTAACGTTCCTCGTGGCGAAATAT
CGTTCTCAGCAGACGACATTGGCCCAGGAGGATTTGTTCGCATTGCGGAG
GAAGCTCTCTTTCAAGGAGCACGCATAGTAAGGAGCAAAGGCCATGTAGC
GGGCCTCGGTTTTAGAGATGATACGTTTATCGCATCCCAACTCATTTTGA
TTTCGCCAGAGTGCGTGGCGCACTATTGGGAAACTATGGGCCATATCTCC
TATTACCGTCGTCTGGACATCGATGCATTACTCCGGACATAGATGACTGC
TGCGCTTGTGAATCAGCCGGCCTGGGAGGAACGGAAACAGGCACCCGCGG
AGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTTCCAACAAT
GCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAGCTAGTCCA
GCAAATATTGTCATATTTATCGGCTCAAGATCTCGCTCGCCTGTCAACCA
CCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGTGGGCCAAT
ATCATCAACTCCAATCTTCCTGAGCCCATACACACACCAGGTGTCTTTGA
CTCCTTTCGCAGTCTCTACATCGCCCACCATCCTTGCTGGTTTATTCCTC
GCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATTTAATCCTC
GCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGAGTCATTGC
AGAACGTCGCTCGCACCAATTTCAACTTTGGGACTGGAACCCAGATGTTA
TTATCCAAACGTTCAATCCTAAAGTCAGTCTGTGGCTAGATGATCCAGTC
CTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTACGCGGTGA
GACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAACTCGTTTT
CGCTTTGTTCCATCCGAATGACATCTGATGTTGTGGCGAACAAACAATGG
CCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGTGAAGTTGA
CCCGGAGTGGGAACACCACCCCCAACAGCTGGACAGAATTTCTGAGCATG
CGTTTCGAATTAGAAGATGGGCACATTTCCGATTGGGCATGCCGATCTTC
ACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTTGACCCGGA
GCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTGGGTTGGAG
ACTACTCAGCACATGGATGTGAATTTCTGCTTTTCCTACAACGTGATCAA
GGGGAAGGGCGATGCAGCCTTGAGGCTATCAAGCTCACTGGAGACCCTAA
CGTTCCTCGTGGCGAAATATCGTTCTCAGCAGACGACATTGGCCCAGGAG
GATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCACGCATAGTA
AGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR021894 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| DBxref | PFAM:PF12014 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:2020039..2021417 - |
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