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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:2256063..2256613- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004907-T1 ID=CBS51388_004907-T1|Name=CBS51388_004907-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=551bp|location=Sequence derived from alignment at An07:2256063..2256613- (Aspergillus niger CBS 513.88)
ATGCGTTCCAAGTTTAAGGACGAGCACCCCTTCGAGAAGCGCAAGGCAGA
GGCCGAGCGTATCCGTCAGAAATATGCCGATCGCATTCCAGTACGTCTAT
CCTTTGTTTTATTTTCTACTGTGATCTTGATTTCACGGTCTTTTGGGGGA
AGGAACGGGTCTCTAGCTCACCGCTTGTTCGAGTCGCTAACCCGGCTCCT
ATCCTACAGGTAATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCAT
CGACAAGAAGAAATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCG
TCTACGTGATCCGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTT
ATCTTTGTCGACGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTAT
CTACGAAGAGCACAAGGATGAAGATGGCTTCTTGTATATCACGTATGCCG
ATCCCTCTGATTTCCTACTACCACTGTTCTGTGTGCATAGTGCTAACTCG
GATCTTCTCTTTATCAGGTACTCCGGCGAGAATACGTTTGGTGACTGCTA
G back to topCoding sequence (CDS) from alignment at An07:2256063..2256613- >CBS51388_004907-T1 ID=CBS51388_004907-T1|Name=CBS51388_004907-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1071bp|location=Sequence derived from alignment at An07:2256063..2256613- (Aspergillus niger CBS 513.88)
GTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGCGAAAAGG
TCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCTTGTCCCT
GCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGCGGATTAA
GCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTTTTGCCGC
CTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGATGAAGAT
GGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCACCCCTTC
GAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATGCCGATCG
CATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGC
GAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCT
TGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGC
GGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTT
TTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGA
TGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCA
CCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATG
CCGATCGCATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGT
AATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGA
AATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATC
CGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGA
CGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGC
ACAAGGATGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGG
ACGAGCACCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAG
AAATATGCCGATCGCATTCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BTA |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR004241 |
| DBxref | PFAM:PF02991 |
| DBxref | PFAM:PF04110 |
| Product | ubiquitin-like protein atg8 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:2256063..2256613 - |
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