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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:275411..277134+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005041-T1 ID=CBS51388_005041-T1|Name=CBS51388_005041-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1724bp|location=Sequence derived from alignment at An08:275411..277134+ (Aspergillus niger CBS 513.88)
ATGGCACCCTCGACCATCTCCCGCACTCGGACAGGCTGCTGGGCTTGTAG
GTCCCGGAGGGTAAAATGTGATGGTATTATAGTTTCCTCTTGGATTGAAA
AGCCAGTGTAAGCTAACACATCAGCAAAGAGACCCACCCCGTCTGCCGTC
GCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTGG
CTTGATGAATCGATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTATG
GTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAGATGAGCAGGGTCTGG
AGATGGTGCGACATACTGTGCCTAATGCGTCGCGCCAGCAGTGGATGTTT
CTAAACACGTCCGCTGACGACGTGAACCGGCTCTGTATGGAGTACCAAAC
GGTATATGGCGGGATCTTACCCAGTCATCAACGACGGCTGCTACTATCAC
CCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGCGAGGAC
CAAATGTTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCCT
GGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCCTGCCCATGG
CCCTCAACTCTGACGGCATCTATCATGCGGCGTTGGCAATTTCCGCAAAT
ACCCTGCGTCTTTCCAAAGTACGGTATCGTGTCCCTGCTTTGGAGCACCA
TCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGACAGTTGGT
CGGATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGG
TTTGAGGTATTGAAACCTTTTCACCATAATGCACCCAATTAGTTGTGAGA
ATTGACACCATTAGATCTCAGATCATAGTCGTTCATCGTGGGTGACACAC
CTTAACGGGTTCCAGGATGTCATGTCTGCACGAAAGCAACGACATTGGAA
AACATCATCGCAGCACAGTCTGGAGCTTCTTGGTTTCTTTGACCGCTACT
TTGCTTTCCACCTCGTTCTTGCCCGAACGGCCTTTCGATGGGATGGGCCA
CGAACACACCCATGTCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAAT
TATTGACCCTTATATGGGATTTAGCCACGCGCTACTTCTCTTAATAAATG
AAGTGACTGATTTGGCATGGCAAGAACATGAGCTGGACATTCAGAAGGTG
TATGGGCTGAAACACTCGTTGGAGGTGCTCCGTCAGACGCCACCTCATGG
GGATATTAACTTACACTCAGGGCAAGAGTGCATGGTCATTGCTGAAGCAA
ACCACCTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAA
TCAATTTCTTCATGTTCATCATTCAGCTCGGAGGAGAAACTCCGCTATGT
TCGTCAGATTCTCAATCTTATTCAGGCGCACAAGTCCAACATGATGCGCA
CTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCG
GACGACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGC
CATTCGTCGGTTTGGCGTACGTCTGTCCACCCATATATACCATGTCACAA
GCTAATGATTTAGAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCT
GGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCA
GGGAAGACAGCGCGCTTTGAATAG back to topCoding sequence (CDS) from alignment at An08:275411..277134+ >CBS51388_005041-T1 ID=CBS51388_005041-T1|Name=CBS51388_005041-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6048bp|location=Sequence derived from alignment at An08:275411..277134+ (Aspergillus niger CBS 513.88)
ATGGCACCCTCGACCATCTCCCGCACTCGGACAGGCTGCTGGGCTTGTAG
GTCCCGGAGGGTAAAATGTGATGAGACCCACCCCGTCTGCCGTCGCTGCG
CGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTGACTTGGCTTGAT
GAATCGATCGCCAAGGGCGTGTGTCATGGGAGGGCCGGAGTATGGTCGAA
GAATGGCCGGAAGAGAAAGGATGTCTCAGATGAGCAGGGTCTGGAGATGG
TGCGACATACTGTGCCTAATGCGTCGCGCCAGCAGTGGATGTTTCTAAAC
ACGTCCGCTGACGACGTGAACCGGCTCTGTATGGAGTACCAAACGGTATA
TGGCGGGATCTTACCCAGTCATCAACGACGGCTGCTACTATCACCCGCAT
TGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGCGAGGACCAAATG
TTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTCAACCCTGGTCGA
CAATGTGCAATCGAATCCATATCGATACTTGATCCTGCCCATGGCCCTCA
ACTCTGACGGCATCTATCATGCGGCGTTGGCAATTTCCGCAAATACCCTG
CGTCTTTCCAAAGTACGGTATCGTGTCCCTGCTTTGGAGCACCATCATCG
TGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGACAGTTGGTCGGATT
GGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAG
GATGTCATGTCTGCACGAAAGCAACGACATTGGAAAACATCATCGCAGCA
CAGTCTGGAGCTTCTTGGTTTCTTTGACCGCTACTTTGCTTTCCACCTCG
TTCTTGCCCGAACGGCCTTTCGATGGGATGGGCCACGAACACACCCATGT
CTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAATTATTGACCCTTATAT
GGGATTTAGCCACGCGCTACTTCTCTTAATAAATGAAGTGACTGATTTGG
CATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTATGGGCTGAAACAC
TCGTTGGAGGTGCTCCGTCAGACGCCACCTCATGGGGATATTAACTTACA
CTCAGGGCAAGAGTGCATGGTCATTGCTGAAGCAAACCACCTGGGTGCAA
TACTGCTCCTGTACGAGATATGCTCGTCTTCTGAATCAATTTCTTCATGT
TCATCATTCAGCTCGGAGGAGAAACTCCGCTATGTTCGTCAGATTCTCAA
TCTTATTCAGGCGCACAAGTCCAACATGATGCGCACTGCCGTCCTCCCTC
TATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGACGACAACGACAGA
GTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGG
CAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCTGGCGACGCCGTG
ACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCAGGGAAGACAGCG
CGCTTTGAATAGATGGCACCCTCGACCATCTCCCGCACTCGGACAGGCTG
CTGGGCTTGTAGGTCCCGGAGGGTAAAATGTGATGAGACCCACCCCGTCT
GCCGTCGCTGCGCGCGAAACAACCGGTGCTGCGAATACAGCTTGCAGTTG
ACTTGGCTTGATGAATCGATCGCCAAGGGCGTGTGTCATGGGAGGGCCGG
AGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTCTCAGATGAGCAGG
GTCTGGAGATGGTGCGACATACTGTGCCTAATGCGTCGCGCCAGCAGTGG
ATGTTTCTAAACACGTCCGCTGACGACGTGAACCGGCTCTGTATGGAGTA
CCAAACGGTATATGGCGGGATCTTACCCAGTCATCAACGACGGCTGCTAC
TATCACCCGCATTGAATACAATGCCAGCCACGGCCTCGAATCGATCCAGC
GAGGACCAAATGTTACTGGCATTCTTTGAGGCAGTCATTTGCAGCAGCTC
AACCCTGGTCGACAATGTGCAATCGAATCCATATCGATACTTGATCCTGC
CCATGGCCCTCAACTCTGACGGCATCTATCATGCGGCGTTGGCAATTTCC
GCAAATACCCTGCGTCTTTCCAAAGTACGGTATCGTGTCCCTGCTTTGGA
GCACCATCATCGTGCGCTACTCTACCTCCAATCTCTTCTAGATCGAGACA
GTTGGTCGGATTGGGAGATGGATGAGATCTTGGGGCTTGTTTTGATGCTC
TGTTGGTTTGAGGATGTCATGTCTGCACGAAAGCAACGACATTGGAAAAC
ATCATCGCAGCACAGTCTGGAGCTTCTTGGTTTCTTTGACCGCTACTTTG
CTTTCCACCTCGTTCTTGCCCGAACGGCCTTTCGATGGGATGGGCCACGA
ACACACCCATGTCTTTCTGCCTTGCCTTCAAGTCCATCCTCAGAAATTAT
TGACCCTTATATGGGATTTAGCCACGCGCTACTTCTCTTAATAAATGAAG
TGACTGATTTGGCATGGCAAGAACATGAGCTGGACATTCAGAAGGTGTAT
GGGCTGAAACACTCGTTGGAGGTGCTCCGTCAGACGCCACCTCATGGGGA
TATTAACTTACACTCAGGGCAAGAGTGCATGGTCATTGCTGAAGCAAACC
ACCTGGGTGCAATACTGCTCCTGTACGAGATATGCTCGTCTTCTGAATCA
ATTTCTTCATGTTCATCATTCAGCTCGGAGGAGAAACTCCGCTATGTTCG
TCAGATTCTCAATCTTATTCAGGCGCACAAGTCCAACATGATGCGCACTG
CCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGCTGTGTCTCGGAC
GACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGAGTGGGAGGCCAT
TCGTCGGTTTGGCAATATCGCACCGGCAAGAGAAGTGATAGAGATGGTCT
GGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAACGGCGCCATGTCA
GGGAAGACAGCGCGCTTTGAATAGATGGCACCCTCGACCATCTCCCGCAC
TCGGACAGGCTGCTGGGCTTGTAGGTCCCGGAGGGTAAAATGTGATGAGA
CCCACCCCGTCTGCCGTCGCTGCGCGCGAAACAACCGGTGCTGCGAATAC
AGCTTGCAGTTGACTTGGCTTGATGAATCGATCGCCAAGGGCGTGTGTCA
TGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGAGAAAGGATGTCT
CAGATGAGCAGGGTCTGGAGATGGTGCGACATACTGTGCCTAATGCGTCG
CGCCAGCAGTGGATGTTTCTAAACACGTCCGCTGACGACGTGAACCGGCT
CTGTATGGAGTACCAAACGGTATATGGCGGGATCTTACCCAGTCATCAAC
GACGGCTGCTACTATCACCCGCATTGAATACAATGCCAGCCACGGCCTCG
AATCGATCCAGCGAGGACCAAATGTTACTGGCATTCTTTGAGGCAGTCAT
TTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGAATCCATATCGAT
ACTTGATCCTGCCCATGGCCCTCAACTCTGACGGCATCTATCATGCGGCG
TTGGCAATTTCCGCAAATACCCTGCGTCTTTCCAAAGTACGGTATCGTGT
CCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACCTCCAATCTCTTC
TAGATCGAGACAGTTGGTCGGATTGGGAGATGGATGAGATCTTGGGGCTT
GTTTTGATGCTCTGTTGGTTTGAGGATGTCATGTCTGCACGAAAGCAACG
ACATTGGAAAACATCATCGCAGCACAGTCTGGAGCTTCTTGGTTTCTTTG
ACCGCTACTTTGCTTTCCACCTCGTTCTTGCCCGAACGGCCTTTCGATGG
GATGGGCCACGAACACACCCATGTCTTTCTGCCTTGCCTTCAAGTCCATC
CTCAGAAATTATTGACCCTTATATGGGATTTAGCCACGCGCTACTTCTCT
TAATAAATGAAGTGACTGATTTGGCATGGCAAGAACATGAGCTGGACATT
CAGAAGGTGTATGGGCTGAAACACTCGTTGGAGGTGCTCCGTCAGACGCC
ACCTCATGGGGATATTAACTTACACTCAGGGCAAGAGTGCATGGTCATTG
CTGAAGCAAACCACCTGGGTGCAATACTGCTCCTGTACGAGATATGCTCG
TCTTCTGAATCAATTTCTTCATGTTCATCATTCAGCTCGGAGGAGAAACT
CCGCTATGTTCGTCAGATTCTCAATCTTATTCAGGCGCACAAGTCCAACA
TGATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTCCTAGCAGGTTGC
TGTGTCTCGGACGACAACGACAGAGTCATTGTTCTGCAAATCTTCCAAGA
GTGGGAGGCCATTCGTCGGTTTGGCAATATCGCACCGGCAAGAGAAGTGA
TAGAGATGGTCTGGCGACGCCGTGACCTTAACCAAAATGAATTTGCCAAC
GGCGCCATGTCAGGGAAGACAGCGCGCTTTGAATAGATGGCACCCTCGAC
CATCTCCCGCACTCGGACAGGCTGCTGGGCTTGTAGGTCCCGGAGGGTAA
AATGTGATGAGACCCACCCCGTCTGCCGTCGCTGCGCGCGAAACAACCGG
TGCTGCGAATACAGCTTGCAGTTGACTTGGCTTGATGAATCGATCGCCAA
GGGCGTGTGTCATGGGAGGGCCGGAGTATGGTCGAAGAATGGCCGGAAGA
GAAAGGATGTCTCAGATGAGCAGGGTCTGGAGATGGTGCGACATACTGTG
CCTAATGCGTCGCGCCAGCAGTGGATGTTTCTAAACACGTCCGCTGACGA
CGTGAACCGGCTCTGTATGGAGTACCAAACGGTATATGGCGGGATCTTAC
CCAGTCATCAACGACGGCTGCTACTATCACCCGCATTGAATACAATGCCA
GCCACGGCCTCGAATCGATCCAGCGAGGACCAAATGTTACTGGCATTCTT
TGAGGCAGTCATTTGCAGCAGCTCAACCCTGGTCGACAATGTGCAATCGA
ATCCATATCGATACTTGATCCTGCCCATGGCCCTCAACTCTGACGGCATC
TATCATGCGGCGTTGGCAATTTCCGCAAATACCCTGCGTCTTTCCAAAGT
ACGGTATCGTGTCCCTGCTTTGGAGCACCATCATCGTGCGCTACTCTACC
TCCAATCTCTTCTAGATCGAGACAGTTGGTCGGATTGGGAGATGGATGAG
ATCTTGGGGCTTGTTTTGATGCTCTGTTGGTTTGAGGATGTCATGTCTGC
ACGAAAGCAACGACATTGGAAAACATCATCGCAGCACAGTCTGGAGCTTC
TTGGTTTCTTTGACCGCTACTTTGCTTTCCACCTCGTTCTTGCCCGAACG
GCCTTTCGATGGGATGGGCCACGAACACACCCATGTCTTTCTGCCTTGCC
TTCAAGTCCATCCTCAGAAATTATTGACCCTTATATGGGATTTAGCCACG
CGCTACTTCTCTTAATAAATGAAGTGACTGATTTGGCATGGCAAGAACAT
GAGCTGGACATTCAGAAGGTGTATGGGCTGAAACACTCGTTGGAGGTGCT
CCGTCAGACGCCACCTCATGGGGATATTAACTTACACTCAGGGCAAGAGT
GCATGGTCATTGCTGAAGCAAACCACCTGGGTGCAATACTGCTCCTGTAC
GAGATATGCTCGTCTTCTGAATCAATTTCTTCATGTTCATCATTCAGCTC
GGAGGAGAAACTCCGCTATGTTCGTCAGATTCTCAATCTTATTCAGGCGC
ACAAGTCCAACATGATGCGCACTGCCGTCCTCCCTCTATGGCCTCTCTTC
CTAGCAGGTTGCTGTGTCTCGGACGACAACGACAGAGTCATTGTTCTGCA
AATCTTCCAAGAGTGGGAGGCCATTCGTCGGTTTGGCAATATCGCACCGG
CAAGAGAAGTGATAGAGATGGTCTGGCGACGCCGTGACCTTAACCAAAAT
GAATTTGCCAACGGCGCCATGTCAGGGAAGACAGCGCGCTTTGAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:275411..277134 + |
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