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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:338817..341367+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005066-T1 ID=CBS51388_005066-T1|Name=CBS51388_005066-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2551bp|location=Sequence derived from alignment at An08:338817..341367+ (Aspergillus niger CBS 513.88)
ATGTCGTCCATTGCACGGCCACCAGACCCCTGCCTGGTAGCAATCATTCT
AATAGTGCGCTCACGAGCCGGTCCGCGCTTCGTCTTCCACTACCCGCCCA
ACCCGCTCAGCGAGAACGGACTCCGAGGGGCGCCCAAAGCGCGCCGACCT
TCACGCAAGAATTCCAAGAGCAACGAATCCAGCTCTAGCGAAGACAGCAG
CTCCACCTCCAGCGAAGATGAGGACGAGGCACCAATAACGGCAACAGCAG
CAGCTCCCGCAACCACAGGGACTGCGACACAGCCAGCCAATGCAACCCAG
AACGCCTCACACGTCGCAGGCAGTCATCCCGTGGCAGGAAGACGGTCGAG
TAACTTCGGCGTCGTCGACGATACAACCATATCGGGCTCGCCGGGCGGCG
AGTCCCAGCGTGCAGGCTCAGTGGGATCAGGGAGAGGGTTGATGATGCGG
AAACGAGGGACGAATTCCGATGCCGAGGAGGATGCAGGCGCCGCGTCGGA
TAGACAGGAGGATGAGGCAGGGCCGTTCCGACCGCCGTGGGAGTCGTTAT
TGGGGCTCCCTGCGGATGTGTGGGAGAAGTTGTTGAGTCCGTCGCGGTCG
TGGCATAAGCGGCGATTTGAGGTCGGGATTAATGATTTGGCGTTTGTGGG
GTGGCCGGTTTTTGTGCGTGAGGATGGTACGTGGAGGAAGCAGAGGAGGA
AGAAGAGGAAGCCTCGGGCTACTTGGGAGGGAGGGGAGCTGGGGCATAAT
GAGACTCCTGGGGATGGGGATGGGGATGGGGAGGGTGATGAGGCTGGGAC
TGAGGATGATTCGCCTGATCGGGGTACGGAGCTTATTGCTGCCTCGACGG
AGACGTTGAGCCCGAAGCAGATGGCTACTACGGACAGTCAGCGGGCGTCG
ATGATCAGTGTTAGGTCGTTCAGGACGTTGAGTGAGGCACTGGATCCGGA
TGATAAGGATTGCATGACTATGTTTAATGTCGTGTTTGTTTTGGATCCGC
CGTTGTTGGAGTATTCCATGCGGTTGAGGGAGATTTACGACAATATTATT
AAGAAGTTCTCGAAGGCTTTGAAGTGGGAGCAGGCTCGGACGGATTATGT
TTGGAAGGAGGCGCAGCATATCTCACATATCAAGGAGAAGGCTAAAGAGA
AGCGTATGTGGTCCTGTCGATGTGGCGCAGGTTTGGTTGCTGACGGAGCG
ATGAATAGGAATGTCCGTGAATAGCCTCTATTCGGAGCTAATCAGCCAGT
CCTCTCTTGCAAGAGCTATCTGCACTGTTTTCACCAGCATATCGGCCTCC
AAGATTGCCTCAGTGTCCCTCAGTCCAGACGTGTCCATCTCACTCCAGAT
ACCACCTTTGACCTCGACGCCATGGCTTCCTGGGCCGACTGACAAGGCAT
ATCCGGGACTCTGGCTTACAACGGCAGACAGTGTCACTCCGGTCGATGAT
CCCACTGCCGATGAGAACACCGCGCCCCATCAGGTCCTTGCTAAACACTT
TGCCCTCTTATTGCTGGACAATGAGGCATCGATTCTCAAAGACGTTGAAG
CATCCGGGGGCGCTCTGGCTCCTGCGCTTGCCCATTATATTCGGTGCTCG
AAGCCAACGAAGTCGTTTGCGCAAATCTCTGTATCATCCGGCATACCGCT
TTCCACAATACAGATGCTGGCTAGCCATCTAGTGTATTGGAGAAGAGCGC
GAGCAATCCCTCCACTCCATCAAAGAGATACTTACATCGTATCGCCGAAC
TGCGATCTGAGCAAGCTTGAGGTAGCCACAGCGGCTTATCAGGCAGCGTT
CCCGACACTCCCAAGTCTCCCAAAGATGCTATCAGCTATGAGCGGAACGC
CCAGACCATACGGAAGCTTCATTCCAAGCAAAGACCACAAAGACACATAC
TTCGCCATTTTAGCGTGGCTATTACGAGGTGGCTGGGTCACTCAATTGCG
AGCCTTTGCAAGAGTCAAAATAAGCCCTGAAATCAAGATGGCAGTGGAGA
CGGCCCTTCGACAGGAAGAAGTTGATAAATACTTGAGCAAAAGGGGATCG
GCGTCAGATACCGAGATAAGGGAGGACCTTGATGATGCCAGTTCATCTTC
GTCATCATCACTGGGCAGCAACGGAAGCGGCGATGAAACGCCAATGCCAG
GTCGGTATAAACGGAACAACGAGCTCGACCTCTCTCATTCTCTCCTGGAC
CAAAACACTTCCTTAAAAACGTCGTCGCTCATTCTTTACCCACACCGTGC
TTCACCATTAGAGTCTCGATGGTTAGGTGAGGTCATGGCGCGGTTCCCCG
AACTTCAGGGCGACGTTCCCGATGGGGACCTTGAATACGCGGGACTCCGG
ACATCGCTCAAGAAGTACTGGCCGACCTTTATCAAATACTTCAACGGGTA
TGACGCGCTCGAGAAGATTCCCGTCCGAGAGAGCTTGAAGCGCAAGCTCG
TATGGCAGATCCTCATGCGCCTAGGATTAGTGACAGGGCAGCAGTCATCT
ATTCAGTTGGATCCAAGGGAGCAGATTCTGGTTAGTGTCCGACATTGGTA
G back to topCoding sequence (CDS) from alignment at An08:338817..341367+ >CBS51388_005066-T1 ID=CBS51388_005066-T1|Name=CBS51388_005066-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4992bp|location=Sequence derived from alignment at An08:338817..341367+ (Aspergillus niger CBS 513.88)
ATGTCGTCCATTGCACGGCCACCAGACCCCTGCCTGGTAGCAATCATTCT
AATAGTGCGCTCACGAGCCGGTCCGCGCTTCGTCTTCCACTACCCGCCCA
ACCCGCTCAGCGAGAACGGACTCCGAGGGGCGCCCAAAGCGCGCCGACCT
TCACGCAAGAATTCCAAGAGCAACGAATCCAGCTCTAGCGAAGACAGCAG
CTCCACCTCCAGCGAAGATGAGGACGAGGCACCAATAACGGCAACAGCAG
CAGCTCCCGCAACCACAGGGACTGCGACACAGCCAGCCAATGCAACCCAG
AACGCCTCACACGTCGCAGGCAGTCATCCCGTGGCAGGAAGACGGTCGAG
TAACTTCGGCGTCGTCGACGATACAACCATATCGGGCTCGCCGGGCGGCG
AGTCCCAGCGTGCAGGCTCAGTGGGATCAGGGAGAGGGTTGATGATGCGG
AAACGAGGGACGAATTCCGATGCCGAGGAGGATGCAGGCGCCGCGTCGGA
TAGACAGGAGGATGAGGCAGGGCCGTTCCGACCGCCGTGGGAGTCGTTAT
TGGGGCTCCCTGCGGATGTGTGGGAGAAGTTGTTGAGTCCGTCGCGGTCG
TGGCATAAGCGGCGATTTGAGGTCGGGATTAATGATTTGGCGTTTGTGGG
GTGGCCGGTTTTTGTGCGTGAGGATGGTACGTGGAGGAAGCAGAGGAGGA
AGAAGAGGAAGCCTCGGGCTACTTGGGAGGGAGGGGAGCTGGGGCATAAT
GAGACTCCTGGGGATGGGGATGGGGATGGGGAGGGTGATGAGGCTGGGAC
TGAGGATGATTCGCCTGATCGGGGTACGGAGCTTATTGCTGCCTCGACGG
AGACGTTGAGCCCGAAGCAGATGGCTACTACGGACAGTCAGCGGGCGTCG
ATGATCAGTGTTAGGTCGTTCAGGACGTTGAGTGAGGCACTGGATCCGGA
TGATAAGGATTGCATGACTATGTTTAATGTCGTGTTTGTTTTGGATCCGC
CGTTGTTGGAGTATTCCATGCGGTTGAGGGAGATTTACGACAATATTATT
AAGAAGTTCTCGAAGGCTTTGAAGTGGGAGCAGGCTCGGACGGATTATGT
TTGGAAGGAGGCGCAGCATATCTCACATATCAAGGAGAAGGCTAAAGAGA
AGCGAATGTCCGTGAATAGCCTCTATTCGGAGCTAATCAGCCAGTCCTCT
CTTGCAAGAGCTATCTGCACTGTTTTCACCAGCATATCGGCCTCCAAGAT
TGCCTCAGTGTCCCTCAGTCCAGACGTGTCCATCTCACTCCAGATACCAC
CTTTGACCTCGACGCCATGGCTTCCTGGGCCGACTGACAAGGCATATCCG
GGACTCTGGCTTACAACGGCAGACAGTGTCACTCCGGTCGATGATCCCAC
TGCCGATGAGAACACCGCGCCCCATCAGGTCCTTGCTAAACACTTTGCCC
TCTTATTGCTGGACAATGAGGCATCGATTCTCAAAGACGTTGAAGCATCC
GGGGGCGCTCTGGCTCCTGCGCTTGCCCATTATATTCGGTGCTCGAAGCC
AACGAAGTCGTTTGCGCAAATCTCTGTATCATCCGGCATACCGCTTTCCA
CAATACAGATGCTGGCTAGCCATCTAGTGTATTGGAGAAGAGCGCGAGCA
ATCCCTCCACTCCATCAAAGAGATACTTACATCGTATCGCCGAACTGCGA
TCTGAGCAAGCTTGAGGTAGCCACAGCGGCTTATCAGGCAGCGTTCCCGA
CACTCCCAAGTCTCCCAAAGATGCTATCAGCTATGAGCGGAACGCCCAGA
CCATACGGAAGCTTCATTCCAAGCAAAGACCACAAAGACACATACTTCGC
CATTTTAGCGTGGCTATTACGAGGTGGCTGGGTCACTCAATTGCGAGCCT
TTGCAAGAGTCAAAATAAGCCCTGAAATCAAGATGGCAGTGGAGACGGCC
CTTCGACAGGAAGAAGTTGATAAATACTTGAGCAAAAGGGGATCGGCGTC
AGATACCGAGATAAGGGAGGACCTTGATGATGCCAGTTCATCTTCGTCAT
CATCACTGGGCAGCAACGGAAGCGGCGATGAAACGCCAATGCCAGGTCGG
TATAAACGGAACAACGAGCTCGACCTCTCTCATTCTCTCCTGGACCAAAA
CACTTCCTTAAAAACGTCGTCGCTCATTCTTTACCCACACCGTGCTTCAC
CATTAGAGTCTCGATGGTTAGGTGAGGTCATGGCGCGGTTCCCCGAACTT
CAGGGCGACGTTCCCGATGGGGACCTTGAATACGCGGGACTCCGGACATC
GCTCAAGAAGTACTGGCCGACCTTTATCAAATACTTCAACGGGTATGACG
CGCTCGAGAAGATTCCCGTCCGAGAGAGCTTGAAGCGCAAGCTCGTATGG
CAGATCCTCATGCGCCTAGGATTAGTGACAGGGCAGCAGTCATCTATTCA
GTTGGATCCAAGGGAGCAGATTCTGGTTAGTGTCCGACATTGGTAGATGT
CGTCCATTGCACGGCCACCAGACCCCTGCCTGGTAGCAATCATTCTAATA
GTGCGCTCACGAGCCGGTCCGCGCTTCGTCTTCCACTACCCGCCCAACCC
GCTCAGCGAGAACGGACTCCGAGGGGCGCCCAAAGCGCGCCGACCTTCAC
GCAAGAATTCCAAGAGCAACGAATCCAGCTCTAGCGAAGACAGCAGCTCC
ACCTCCAGCGAAGATGAGGACGAGGCACCAATAACGGCAACAGCAGCAGC
TCCCGCAACCACAGGGACTGCGACACAGCCAGCCAATGCAACCCAGAACG
CCTCACACGTCGCAGGCAGTCATCCCGTGGCAGGAAGACGGTCGAGTAAC
TTCGGCGTCGTCGACGATACAACCATATCGGGCTCGCCGGGCGGCGAGTC
CCAGCGTGCAGGCTCAGTGGGATCAGGGAGAGGGTTGATGATGCGGAAAC
GAGGGACGAATTCCGATGCCGAGGAGGATGCAGGCGCCGCGTCGGATAGA
CAGGAGGATGAGGCAGGGCCGTTCCGACCGCCGTGGGAGTCGTTATTGGG
GCTCCCTGCGGATGTGTGGGAGAAGTTGTTGAGTCCGTCGCGGTCGTGGC
ATAAGCGGCGATTTGAGGTCGGGATTAATGATTTGGCGTTTGTGGGGTGG
CCGGTTTTTGTGCGTGAGGATGGTACGTGGAGGAAGCAGAGGAGGAAGAA
GAGGAAGCCTCGGGCTACTTGGGAGGGAGGGGAGCTGGGGCATAATGAGA
CTCCTGGGGATGGGGATGGGGATGGGGAGGGTGATGAGGCTGGGACTGAG
GATGATTCGCCTGATCGGGGTACGGAGCTTATTGCTGCCTCGACGGAGAC
GTTGAGCCCGAAGCAGATGGCTACTACGGACAGTCAGCGGGCGTCGATGA
TCAGTGTTAGGTCGTTCAGGACGTTGAGTGAGGCACTGGATCCGGATGAT
AAGGATTGCATGACTATGTTTAATGTCGTGTTTGTTTTGGATCCGCCGTT
GTTGGAGTATTCCATGCGGTTGAGGGAGATTTACGACAATATTATTAAGA
AGTTCTCGAAGGCTTTGAAGTGGGAGCAGGCTCGGACGGATTATGTTTGG
AAGGAGGCGCAGCATATCTCACATATCAAGGAGAAGGCTAAAGAGAAGCG
AATGTCCGTGAATAGCCTCTATTCGGAGCTAATCAGCCAGTCCTCTCTTG
CAAGAGCTATCTGCACTGTTTTCACCAGCATATCGGCCTCCAAGATTGCC
TCAGTGTCCCTCAGTCCAGACGTGTCCATCTCACTCCAGATACCACCTTT
GACCTCGACGCCATGGCTTCCTGGGCCGACTGACAAGGCATATCCGGGAC
TCTGGCTTACAACGGCAGACAGTGTCACTCCGGTCGATGATCCCACTGCC
GATGAGAACACCGCGCCCCATCAGGTCCTTGCTAAACACTTTGCCCTCTT
ATTGCTGGACAATGAGGCATCGATTCTCAAAGACGTTGAAGCATCCGGGG
GCGCTCTGGCTCCTGCGCTTGCCCATTATATTCGGTGCTCGAAGCCAACG
AAGTCGTTTGCGCAAATCTCTGTATCATCCGGCATACCGCTTTCCACAAT
ACAGATGCTGGCTAGCCATCTAGTGTATTGGAGAAGAGCGCGAGCAATCC
CTCCACTCCATCAAAGAGATACTTACATCGTATCGCCGAACTGCGATCTG
AGCAAGCTTGAGGTAGCCACAGCGGCTTATCAGGCAGCGTTCCCGACACT
CCCAAGTCTCCCAAAGATGCTATCAGCTATGAGCGGAACGCCCAGACCAT
ACGGAAGCTTCATTCCAAGCAAAGACCACAAAGACACATACTTCGCCATT
TTAGCGTGGCTATTACGAGGTGGCTGGGTCACTCAATTGCGAGCCTTTGC
AAGAGTCAAAATAAGCCCTGAAATCAAGATGGCAGTGGAGACGGCCCTTC
GACAGGAAGAAGTTGATAAATACTTGAGCAAAAGGGGATCGGCGTCAGAT
ACCGAGATAAGGGAGGACCTTGATGATGCCAGTTCATCTTCGTCATCATC
ACTGGGCAGCAACGGAAGCGGCGATGAAACGCCAATGCCAGGTCGGTATA
AACGGAACAACGAGCTCGACCTCTCTCATTCTCTCCTGGACCAAAACACT
TCCTTAAAAACGTCGTCGCTCATTCTTTACCCACACCGTGCTTCACCATT
AGAGTCTCGATGGTTAGGTGAGGTCATGGCGCGGTTCCCCGAACTTCAGG
GCGACGTTCCCGATGGGGACCTTGAATACGCGGGACTCCGGACATCGCTC
AAGAAGTACTGGCCGACCTTTATCAAATACTTCAACGGGTATGACGCGCT
CGAGAAGATTCCCGTCCGAGAGAGCTTGAAGCGCAAGCTCGTATGGCAGA
TCCTCATGCGCCTAGGATTAGTGACAGGGCAGCAGTCATCTATTCAGTTG
GATCCAAGGGAGCAGATTCTGGTTAGTGTCCGACATTGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034198 | cellular response to amino acid starvation |
| GO:0032007 | negative regulation of TOR signaling |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005365 |
| DBxref | PFAM:PF03666 |
| Product | Nitrogen permease regulator 3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:338817..341367 + |
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