You are here

Home

CBS51388_005100-T1, CBS51388_005100-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005100-T1
Unique NameCBS51388_005100-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:431886..432884+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005100-T1 ID=CBS51388_005100-T1|Name=CBS51388_005100-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=999bp|location=Sequence derived from alignment at An08:431886..432884+ (Aspergillus niger CBS 513.88)
ATGCCCCGCCCAACAACCCGACAAGAAGTCCTCGCCCGTCTACGCAAGAC
CATCGCCGATGGTTCCATCATCATCGGTGCGGGAGCCGGTATGTACCCAT
CCCTTCAGCATACTAAACCTCACTTACTACCATCTCTCCCATACATCCAA
TCAACACCGACTAACCATAACAATGACATGAAATGTAGGAATCGGCCTCT
CCGCCAAATTCATCGAAAAAGGCGGCGCCGACCTCATCCTCGTCTACAAC
TCGGGCCGATTTCGCATGGCGGGCCGAGGTTCTCTCGCAGGGATGATGCC
CTACTCTGACGCCAACGCCGTGGTCGTAGAGATGGTGATCCCATCCCCGT
CCCCCCACACCTACCACTCATAACTAGATACTAATTGCCATTAAACCAGT
CCAACGAAGTCCTCCCCCTCATCCAAAACACCCCCGTCCTGGCGGGCGTG
TGTGGCACTGACCCCTTCCGGGACATGCGGACCTTCCTGCGCCAACTACG
GGACATCGGGTTCGTCGGCGTGCAAAACTTCCCGACAGTCGGGCTGATCG
ACGGGAACTTCCGCGCGAACCTCGAAGAAACGGGGATGGGGTATGAGAAA
GAGGTGGAGATGATTCGGATCGCACGGGAAATGGATCTGGTGACGACGCC
GTACGTGTTTAACGTGAAGGAAGGGGAGATGATGGCGCGGGCGGGAGCGG
ATGTGATTGTGGTGCATGTGGGATTGACGACGAGTGGGACGATTGGAGCG
CAGACGGCGTTGACGTTGGATGAGTGTGTGAAGGTGGTGCAGGAGGTGCG
GGATGCGGTGGTGAAGGTCAATCCGGAGGTGATTGTGTTGTGTCATGGAG
GGCCGTTGGCGGGGCCGGAGGATGCGGAGTATGTGTTGAAGAGGTGTCAG
GGGGTGCATGGGTTCTTTGGGGCGAGTAGTATGGAGAGGTTGCCGGTGGA
GGTGGCGTTGGAGGAGAACGCGAGGAGGTTTAAGGAGATTCAGTTGTAA
back to top

Coding sequence (CDS) from alignment at An08:431886..432884+

>CBS51388_005100-T1 ID=CBS51388_005100-T1|Name=CBS51388_005100-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2502bp|location=Sequence derived from alignment at An08:431886..432884+ (Aspergillus niger CBS 513.88)
ATGCCCCGCCCAACAACCCGACAAGAAGTCCTCGCCCGTCTACGCAAGAC
CATCGCCGATGGTTCCATCATCATCGGTGCGGGAGCCGGAATCGGCCTCT
CCGCCAAATTCATCGAAAAAGGCGGCGCCGACCTCATCCTCGTCTACAAC
TCGGGCCGATTTCGCATGGCGGGCCGAGGTTCTCTCGCAGGGATGATGCC
CTACTCTGACGCCAACGCCGTGGTCGTAGAGATGTCCAACGAAGTCCTCC
CCCTCATCCAAAACACCCCCGTCCTGGCGGGCGTGTGTGGCACTGACCCC
TTCCGGGACATGCGGACCTTCCTGCGCCAACTACGGGACATCGGGTTCGT
CGGCGTGCAAAACTTCCCGACAGTCGGGCTGATCGACGGGAACTTCCGCG
CGAACCTCGAAGAAACGGGGATGGGGTATGAGAAAGAGGTGGAGATGATT
CGGATCGCACGGGAAATGGATCTGGTGACGACGCCGTACGTGTTTAACGT
GAAGGAAGGGGAGATGATGGCGCGGGCGGGAGCGGATGTGATTGTGGTGC
ATGTGGGATTGACGACGAGTGGGACGATTGGAGCGCAGACGGCGTTGACG
TTGGATGAGTGTGTGAAGGTGGTGCAGGAGGTGCGGGATGCGGTGGTGAA
GGTCAATCCGGAGGTGATTGTGTTGTGTCATGGAGGGCCGTTGGCGGGGC
CGGAGGATGCGGAGTATGTGTTGAAGAGGTGTCAGGGGGTGCATGGGTTC
TTTGGGGCGAGTAGTATGGAGAGGTTGCCGGTGGAGGTGGCGTTGGAGGA
GAACGCGAGGAGGTTTAAGGAGATTCAGTTGTAAATGCCCCGCCCAACAA
CCCGACAAGAAGTCCTCGCCCGTCTACGCAAGACCATCGCCGATGGTTCC
ATCATCATCGGTGCGGGAGCCGGAATCGGCCTCTCCGCCAAATTCATCGA
AAAAGGCGGCGCCGACCTCATCCTCGTCTACAACTCGGGCCGATTTCGCA
TGGCGGGCCGAGGTTCTCTCGCAGGGATGATGCCCTACTCTGACGCCAAC
GCCGTGGTCGTAGAGATGTCCAACGAAGTCCTCCCCCTCATCCAAAACAC
CCCCGTCCTGGCGGGCGTGTGTGGCACTGACCCCTTCCGGGACATGCGGA
CCTTCCTGCGCCAACTACGGGACATCGGGTTCGTCGGCGTGCAAAACTTC
CCGACAGTCGGGCTGATCGACGGGAACTTCCGCGCGAACCTCGAAGAAAC
GGGGATGGGGTATGAGAAAGAGGTGGAGATGATTCGGATCGCACGGGAAA
TGGATCTGGTGACGACGCCGTACGTGTTTAACGTGAAGGAAGGGGAGATG
ATGGCGCGGGCGGGAGCGGATGTGATTGTGGTGCATGTGGGATTGACGAC
GAGTGGGACGATTGGAGCGCAGACGGCGTTGACGTTGGATGAGTGTGTGA
AGGTGGTGCAGGAGGTGCGGGATGCGGTGGTGAAGGTCAATCCGGAGGTG
ATTGTGTTGTGTCATGGAGGGCCGTTGGCGGGGCCGGAGGATGCGGAGTA
TGTGTTGAAGAGGTGTCAGGGGGTGCATGGGTTCTTTGGGGCGAGTAGTA
TGGAGAGGTTGCCGGTGGAGGTGGCGTTGGAGGAGAACGCGAGGAGGTTT
AAGGAGATTCAGTTGTAAATGCCCCGCCCAACAACCCGACAAGAAGTCCT
CGCCCGTCTACGCAAGACCATCGCCGATGGTTCCATCATCATCGGTGCGG
GAGCCGGAATCGGCCTCTCCGCCAAATTCATCGAAAAAGGCGGCGCCGAC
CTCATCCTCGTCTACAACTCGGGCCGATTTCGCATGGCGGGCCGAGGTTC
TCTCGCAGGGATGATGCCCTACTCTGACGCCAACGCCGTGGTCGTAGAGA
TGTCCAACGAAGTCCTCCCCCTCATCCAAAACACCCCCGTCCTGGCGGGC
GTGTGTGGCACTGACCCCTTCCGGGACATGCGGACCTTCCTGCGCCAACT
ACGGGACATCGGGTTCGTCGGCGTGCAAAACTTCCCGACAGTCGGGCTGA
TCGACGGGAACTTCCGCGCGAACCTCGAAGAAACGGGGATGGGGTATGAG
AAAGAGGTGGAGATGATTCGGATCGCACGGGAAATGGATCTGGTGACGAC
GCCGTACGTGTTTAACGTGAAGGAAGGGGAGATGATGGCGCGGGCGGGAG
CGGATGTGATTGTGGTGCATGTGGGATTGACGACGAGTGGGACGATTGGA
GCGCAGACGGCGTTGACGTTGGATGAGTGTGTGAAGGTGGTGCAGGAGGT
GCGGGATGCGGTGGTGAAGGTCAATCCGGAGGTGATTGTGTTGTGTCATG
GAGGGCCGTTGGCGGGGCCGGAGGATGCGGAGTATGTGTTGAAGAGGTGT
CAGGGGGTGCATGGGTTCTTTGGGGCGAGTAGTATGGAGAGGTTGCCGGT
GGAGGTGGCGTTGGAGGAGAACGCGAGGAGGTTTAAGGAGATTCAGTTGT
AA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TM1CBS51388_005100Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005100-T1.exon1CBS51388_005100-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005100-T1.exon2CBS51388_005100-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005100-T1.exon3CBS51388_005100-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005100-T1.cdsCBS51388_005100-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005100-T1CBS51388_005100-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015813
DBxrefInterPro:IPR009215
DBxrefInterPro:IPR013785
DBxrefPFAM:PF09370
ProductToMV susceptible protein tm-1(GCR26)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:431886..432884 +
Powered by Drupal