|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1241263..1242725- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005353-T1 ID=CBS51388_005353-T1|Name=CBS51388_005353-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1463bp|location=Sequence derived from alignment at An08:1241263..1242725- (Aspergillus niger CBS 513.88)
ATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCAATGCTAC
GGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGACAGCCCTC
GCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGAGGCAGAG
GCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGATCCCGGA
TTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTGCTATGAGC
GCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTTCTGGCTC
GCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGACCGTCCC
TTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCATCGTGCAGG
GTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGGCCACCAG
GCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGATCTGCCA
TTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCACGGAAAGC
ACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGTGCCCAAG
ACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACGAACTCAA
TGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCTCCTTCTCC
AGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCACCGGTCAC
AACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGCAGAACGG
CTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCTGTACGAGG
CCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGCCATTGTC
GGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGAACCTTCT
GGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCTGGGTAAGT
TACTTTCTTCACAAACTGGCACAATTGCTGGAACGAATACTGACCTAAAG
ATATAGTCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCAC
TACCAGCCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGA
CCGTGACTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGA
CCCACGTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGAT
GAGGCCAGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGA
AGCCCACACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCC
GTGTGTGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCT
GGAGTGCTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAA
GCTTGAAAAATAG back to topCoding sequence (CDS) from alignment at An08:1241263..1242725- >CBS51388_005353-T1 ID=CBS51388_005353-T1|Name=CBS51388_005353-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2802bp|location=Sequence derived from alignment at An08:1241263..1242725- (Aspergillus niger CBS 513.88)
TCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCAG
CCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTGA
CTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGACCCACG
TTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGCC
AGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCCA
CACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCCGTGTGT
GCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGTG
CTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTGA
AAAATAGATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCA
ATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGAC
AGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGA
GGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGA
TCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTGC
TATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTT
CTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGA
CCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCATC
GTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGG
CCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGA
TCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCAC
GGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGT
GCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACG
AACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCTC
CTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCAC
CGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGC
AGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCTG
TACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGC
CATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGA
ACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCTG
GTCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCA
GCCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTG
ACTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGACCCAC
GTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGC
CAGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCC
ACACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCCGTGTG
TGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGT
GCTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTG
AAAAATAGATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGC
AATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGA
CAGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGG
AGGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAG
ATCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTG
CTATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCT
TCTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAG
ACCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCAT
CGTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCG
GCCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGG
ATCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCA
CGGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCG
TGCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCAC
GAACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCT
CCTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCA
CCGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAG
CAGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCT
GTACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTG
CCATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATG
AACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCT
GG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005804 |
| DBxref | PFAM:PF00487 |
| Product | Oleate hydroxylase fah12 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1241263..1242725 - |
|
