You are here

CBS51388_005502-T1, CBS51388_005502-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005502-T1
Unique NameCBS51388_005502-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1716744..1717440+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005502-T1 ID=CBS51388_005502-T1|Name=CBS51388_005502-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=697bp|location=Sequence derived from alignment at An08:1716744..1717440+ (Aspergillus niger CBS 513.88)
ATGCCCGTTTACATGCTCTACGGCTTTCGCTGGCCGCGCGCCGGCTTTAC CGGCATCCGCGTATACATCGTTCTCCACAACCTGGAAGACGCAACAGCCG AATACCTCCAACAGCCCCTAACCAGCGAACTGGTCTTGGAATCGCTCAAG AAGACCGAACCCGGCATCGTCTCTCGTCTACCCAACCTCCGCTTCATCGA ACAATACGACCCGGAAGACACAAGCGACGACGCAGTCAGCAAGCCGTATG CCTACGTCGGTGGGAAAGTCATCTCCATCCCCGAGGATGTCGGCCCTACT CCCGAGACGAGCTGGAAACCAGAGGACATATTCAAGGAGGAGCCGTTGGA GAAGGACGCCATGGAGGCCTTGACGGAGTTTAGGGATAAGTATGCGGCTG GGGAGCGTATTGGCTGGTGGATTGTGTATAATGGCGATCCGGAGAGGTGG TTCCCTCATGACGAGGAGGAGGATGGGGATAGTTTTGATGATGGGTATGA TGAAGAGGGGAGCTATGCTGATGGTGGAGAGTACGAGAGTGATCAGACGC AGACGCCGCCGGAGACGCCTTCTTCTGCTACGGTGGGTTTATTCTTTCGG TTGATCTTCTAATGAGGTTTGACTTGGCTAATGGTTCATTGTATAGATGC GATTCCCCGAACGGTTGACTCGATTGTTTGCTAGGCGAACGGCTTGA
back to top

Coding sequence (CDS) from alignment at An08:1716744..1717440+

>CBS51388_005502-T1 ID=CBS51388_005502-T1|Name=CBS51388_005502-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1266bp|location=Sequence derived from alignment at An08:1716744..1717440+ (Aspergillus niger CBS 513.88)
ATGCCCGTTTACATGCTCTACGGCTTTCGCTGGCCGCGCGCCGGCTTTAC
CGGCATCCGCGTATACATCGTTCTCCACAACCTGGAAGACGCAACAGCCG
AATACCTCCAACAGCCCCTAACCAGCGAACTGGTCTTGGAATCGCTCAAG
AAGACCGAACCCGGCATCGTCTCTCGTCTACCCAACCTCCGCTTCATCGA
ACAATACGACCCGGAAGACACAAGCGACGACGCAGTCAGCAAGCCGTATG
CCTACGTCGGTGGGAAAGTCATCTCCATCCCCGAGGATGTCGGCCCTACT
CCCGAGACGAGCTGGAAACCAGAGGACATATTCAAGGAGGAGCCGTTGGA
GAAGGACGCCATGGAGGCCTTGACGGAGTTTAGGGATAAGTATGCGGCTG
GGGAGCGTATTGGCTGGTGGATTGTGTATAATGGCGATCCGGAGAGGTGG
TTCCCTCATGACGAGGAGGAGGATGGGGATAGTTTTGATGATGGGTATGA
TGAAGAGGGGAGCTATGCTGATGGTGGAGAGTACGAGAGTGATCAGACGC
AGACGCCGCCGGAGACGCCTTCTTCTGCTACGATGCGATTCCCCGAACGG
TTGACTCGATTGTTTGCTAGGCGAACGGCTTGAATGCCCGTTTACATGCT
CTACGGCTTTCGCTGGCCGCGCGCCGGCTTTACCGGCATCCGCGTATACA
TCGTTCTCCACAACCTGGAAGACGCAACAGCCGAATACCTCCAACAGCCC
CTAACCAGCGAACTGGTCTTGGAATCGCTCAAGAAGACCGAACCCGGCAT
CGTCTCTCGTCTACCCAACCTCCGCTTCATCGAACAATACGACCCGGAAG
ACACAAGCGACGACGCAGTCAGCAAGCCGTATGCCTACGTCGGTGGGAAA
GTCATCTCCATCCCCGAGGATGTCGGCCCTACTCCCGAGACGAGCTGGAA
ACCAGAGGACATATTCAAGGAGGAGCCGTTGGAGAAGGACGCCATGGAGG
CCTTGACGGAGTTTAGGGATAAGTATGCGGCTGGGGAGCGTATTGGCTGG
TGGATTGTGTATAATGGCGATCCGGAGAGGTGGTTCCCTCATGACGAGGA
GGAGGATGGGGATAGTTTTGATGATGGGTATGATGAAGAGGGGAGCTATG
CTGATGGTGGAGAGTACGAGAGTGATCAGACGCAGACGCCGCCGGAGACG
CCTTCTTCTGCTACGATGCGATTCCCCGAACGGTTGACTCGATTGTTTGC
TAGGCGAACGGCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005502CBS51388_005502Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005502-T1.exon1CBS51388_005502-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005502-T1.exon2CBS51388_005502-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005502-T1.cdsCBS51388_005502-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005502-T1CBS51388_005502-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1716744..1717440 +