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CBS51388_005512-T1, CBS51388_005512-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005512-T1
Unique NameCBS51388_005512-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1739996..1742433-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005512-T1 ID=CBS51388_005512-T1|Name=CBS51388_005512-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2438bp|location=Sequence derived from alignment at An08:1739996..1742433- (Aspergillus niger CBS 513.88)
ATGCCCAGATTAGATGGTAAGTATAATTCCTCCTCTCTGCTGATTGCCCG
TTGCTGATGCATCCAGACTCGGAAACGATCCGCATTCTTGTCTCTACAGA
CAACCATGTAGGATACAATGAACGGGATCCCATCCGTGGTGATGACAGCT
GGAAAAGCTTTCATGAGGTAATGTGTCTGGCCAAGGAACAAGATGTGGAC
ATGGTGCTTCTGGCAGGCGATCTCTTCCACGAGAACAAGCCATCGCGGAA
GTCCATGTACCAAGTTATGCGCTCCATTCGTATGAACTGTCTCGGCGATA
AGCCTTGCGAACTGGAGATGCTGAGTGATGCGAGCGAAAATTTTCAGGGT
GCTTTCAATCACGTGAACTACGAGGATTTGGATATCAATGTGGCTATCCC
CATCTTTTCAATTCACGGCAATCACGATGATCCGTCCGGAGAAGGACATC
TGGCTGCATTGGATTTACTTCAGGTGTCGGGGTTGATCAATTACTATGGA
CGGACCCCCGAGTCGGACAATATCCAGATTAAACCGGTTTTGCTCCAGAA
AGGACGCACGAAACTTGCTCTCTACGGTATGAGCAACGTCCGCGATGAGC
GTCTATTTCGCACATTTCGAGACGGCAAGGTCAAGTTCTACCAACCCTCA
ATCCAAAAAGAAGACTGGTTCAACTTGATGTCTGTCCATCAGAACCATTA
CGCACACACCGAGACAGGCTATTTGCCCGAGAATTTCCTCCCCGAATTCC
TGGATCTCGTCGTCTGGGGCCACGAACACGAGTGTTTAATCAACCCGCGA
TTGAACCCCGAGACCAAGTTTCACGTCATGCAGCCCGGCTCATCCGTGGC
AACATCCCTGGTTCCTGGCGAATCAGTGGCCAAACATGTAGCCATTCTCA
GTATCACAGGCCGGGAGTTCAAATGCGAGCCCATCCGTCTCAAGTCCGTC
CGCCCATTCGCCATGCGCGAAATTATCCTCTCCGAAGAAAAAGGCGCGCA
AAAGCTTGCCCGCAAGGACAACAACCGCACGGAAGTGACTCGCCTTCTCA
TGGAGATTGTCGAGGAACTGATCGAAGAAGCGAAAACAGAATGGCTAGAA
ATGCAAGATGAGACAGCAGAAGACGAAGAGCTAGAAGTCCCACTACCACT
AGTGCGACTGCGCGTTGAAACCTCAACGCCAGAAGGAGGCAGTTATGACT
GTGAGAACCCGCAGCGATTCTCCAACCGCTTCGTAGGCAAGGTCGCCAAT
GTGAACGATGTCGTCCAGTTCTACCGCAAGAAGAAAAACACCAACAGTAC
GCGCAAACCGGGTGAAACCGACCTCGACGAGACAGCAGTCTCACACCTCT
CCACCCTCGACACCGTCAAAGTCGAACAATTAGTGCGCGACTTCCTCTCC
GCACAGTCTCTGACCATCCTCCCACAGAACTCCTTCGGCGACGCAGTCGC
CCAATTCATTGACAAAGACGACAAACATGCCTTGGAAATGTTCGTCAACG
AATCACTCGAGAGCCAAATGAAGCACTTACTGGCTCTAGATCGCGACCAC
GATCTAGAGGAAGAAGAAGAAGTGGCAGAAAGCTCCCTACAAAAAGCCAT
GGAGAGATATCGCACTCAAATGGAAGACATGTTCTCCCGCGGTATCAAGA
AACGCACCCGCGGCAAGAAGCGCTTCAAGCCCAAGCCCGACGGCTGGGAC
ACCGAATTCGACGGTGTCTGGGAGGACCAACCCGGCGCTCTCATCCACTC
CGACAACGAGGACGGCGATCCCAATGAAGACGTAGCCGGTGAGGATGGCG
CCGAACAACCCACCACATCACGAGCAACATCATCCACACGCGGCCGCGGC
CGAGGCCGTGGCGGTAGAGCCACCACCACTGCCGCTACAACCCGCAAAAC
CGCCACCACAAAAGCAGCACCTGCTACTACTACTTCAAAGAAAACCACAA
CCTCTACTAAAAGCCGTAAACGCCGCACCGTCTCCTCCGACGAAGAAGAT
GAACAAGAGGATGTCATAATGCTCGACGATGACGATGATGACGACGACGA
CAACGCAGCCACCTCCCTCCCCAACATAGACGAAGAGGACGATGATGACG
ATGACTCCCTCTTCGTCAAACAACCCGCCAAATCTACTACCAGTACTAGA
TCTCGCAGAACAACAACAGCAGCAACAGCGAAAGCAACAACACAACGCCG
CAAAGCTCCATCTCCAGCACCTTCATCCAATACAGTTGGAGGAACCGGAC
AAGCTACGCGAAGAACTCGGGGCAAGCAAGCAACTCAGACAACGCTGAAT
TTTGTAGGCTCGCAGAGTAGTGTGCGAGGGACGGCGGGGTCTGGGAGATC
AACGAGGGCTACGAGGGCGGCGAGTGAGGATATTGAGGATGATAGTGATG
CGTTTGAGCCGATGGCTAGTAGTGCGAGGCGCAGATGA
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Coding sequence (CDS) from alignment at An08:1739996..1742433-

>CBS51388_005512-T1 ID=CBS51388_005512-T1|Name=CBS51388_005512-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4776bp|location=Sequence derived from alignment at An08:1739996..1742433- (Aspergillus niger CBS 513.88)
ACTCGGAAACGATCCGCATTCTTGTCTCTACAGACAACCATGTAGGATAC
AATGAACGGGATCCCATCCGTGGTGATGACAGCTGGAAAAGCTTTCATGA
GGTAATGTGTCTGGCCAAGGAACAAGATGTGGACATGGTGCTTCTGGCAG
GCGATCTCTTCCACGAGAACAAGCCATCGCGGAAGTCCATGTACCAAGTT
ATGCGCTCCATTCGTATGAACTGTCTCGGCGATAAGCCTTGCGAACTGGA
GATGCTGAGTGATGCGAGCGAAAATTTTCAGGGTGCTTTCAATCACGTGA
ACTACGAGGATTTGGATATCAATGTGGCTATCCCCATCTTTTCAATTCAC
GGCAATCACGATGATCCGTCCGGAGAAGGACATCTGGCTGCATTGGATTT
ACTTCAGGTGTCGGGGTTGATCAATTACTATGGACGGACCCCCGAGTCGG
ACAATATCCAGATTAAACCGGTTTTGCTCCAGAAAGGACGCACGAAACTT
GCTCTCTACGGTATGAGCAACGTCCGCGATGAGCGTCTATTTCGCACATT
TCGAGACGGCAAGGTCAAGTTCTACCAACCCTCAATCCAAAAAGAAGACT
GGTTCAACTTGATGTCTGTCCATCAGAACCATTACGCACACACCGAGACA
GGCTATTTGCCCGAGAATTTCCTCCCCGAATTCCTGGATCTCGTCGTCTG
GGGCCACGAACACGAGTGTTTAATCAACCCGCGATTGAACCCCGAGACCA
AGTTTCACGTCATGCAGCCCGGCTCATCCGTGGCAACATCCCTGGTTCCT
GGCGAATCAGTGGCCAAACATGTAGCCATTCTCAGTATCACAGGCCGGGA
GTTCAAATGCGAGCCCATCCGTCTCAAGTCCGTCCGCCCATTCGCCATGC
GCGAAATTATCCTCTCCGAAGAAAAAGGCGCGCAAAAGCTTGCCCGCAAG
GACAACAACCGCACGGAAGTGACTCGCCTTCTCATGGAGATTGTCGAGGA
ACTGATCGAAGAAGCGAAAACAGAATGGCTAGAAATGCAAGATGAGACAG
CAGAAGACGAAGAGCTAGAAGTCCCACTACCACTAGTGCGACTGCGCGTT
GAAACCTCAACGCCAGAAGGAGGCAGTTATGACTGTGAGAACCCGCAGCG
ATTCTCCAACCGCTTCGTAGGCAAGGTCGCCAATGTGAACGATGTCGTCC
AGTTCTACCGCAAGAAGAAAAACACCAACAGTACGCGCAAACCGGGTGAA
ACCGACCTCGACGAGACAGCAGTCTCACACCTCTCCACCCTCGACACCGT
CAAAGTCGAACAATTAGTGCGCGACTTCCTCTCCGCACAGTCTCTGACCA
TCCTCCCACAGAACTCCTTCGGCGACGCAGTCGCCCAATTCATTGACAAA
GACGACAAACATGCCTTGGAAATGTTCGTCAACGAATCACTCGAGAGCCA
AATGAAGCACTTACTGGCTCTAGATCGCGACCACGATCTAGAGGAAGAAG
AAGAAGTGGCAGAAAGCTCCCTACAAAAAGCCATGGAGAGATATCGCACT
CAAATGGAAGACATGTTCTCCCGCGGTATCAAGAAACGCACCCGCGGCAA
GAAGCGCTTCAAGCCCAAGCCCGACGGCTGGGACACCGAATTCGACGGTG
TCTGGGAGGACCAACCCGGCGCTCTCATCCACTCCGACAACGAGGACGGC
GATCCCAATGAAGACGTAGCCGGTGAGGATGGCGCCGAACAACCCACCAC
ATCACGAGCAACATCATCCACACGCGGCCGCGGCCGAGGCCGTGGCGGTA
GAGCCACCACCACTGCCGCTACAACCCGCAAAACCGCCACCACAAAAGCA
GCACCTGCTACTACTACTTCAAAGAAAACCACAACCTCTACTAAAAGCCG
TAAACGCCGCACCGTCTCCTCCGACGAAGAAGATGAACAAGAGGATGTCA
TAATGCTCGACGATGACGATGATGACGACGACGACAACGCAGCCACCTCC
CTCCCCAACATAGACGAAGAGGACGATGATGACGATGACTCCCTCTTCGT
CAAACAACCCGCCAAATCTACTACCAGTACTAGATCTCGCAGAACAACAA
CAGCAGCAACAGCGAAAGCAACAACACAACGCCGCAAAGCTCCATCTCCA
GCACCTTCATCCAATACAGTTGGAGGAACCGGACAAGCTACGCGAAGAAC
TCGGGGCAAGCAAGCAACTCAGACAACGCTGAATTTTGTAGGCTCGCAGA
GTAGTGTGCGAGGGACGGCGGGGTCTGGGAGATCAACGAGGGCTACGAGG
GCGGCGAGTGAGGATATTGAGGATGATAGTGATGCGTTTGAGCCGATGGC
TAGTAGTGCGAGGCGCAGATGAATGCCCAGATTAGATGACTCGGAAACGA
TCCGCATTCTTGTCTCTACAGACAACCATGTAGGATACAATGAACGGGAT
CCCATCCGTGGTGATGACAGCTGGAAAAGCTTTCATGAGGTAATGTGTCT
GGCCAAGGAACAAGATGTGGACATGGTGCTTCTGGCAGGCGATCTCTTCC
ACGAGAACAAGCCATCGCGGAAGTCCATGTACCAAGTTATGCGCTCCATT
CGTATGAACTGTCTCGGCGATAAGCCTTGCGAACTGGAGATGCTGAGTGA
TGCGAGCGAAAATTTTCAGGGTGCTTTCAATCACGTGAACTACGAGGATT
TGGATATCAATGTGGCTATCCCCATCTTTTCAATTCACGGCAATCACGAT
GATCCGTCCGGAGAAGGACATCTGGCTGCATTGGATTTACTTCAGGTGTC
GGGGTTGATCAATTACTATGGACGGACCCCCGAGTCGGACAATATCCAGA
TTAAACCGGTTTTGCTCCAGAAAGGACGCACGAAACTTGCTCTCTACGGT
ATGAGCAACGTCCGCGATGAGCGTCTATTTCGCACATTTCGAGACGGCAA
GGTCAAGTTCTACCAACCCTCAATCCAAAAAGAAGACTGGTTCAACTTGA
TGTCTGTCCATCAGAACCATTACGCACACACCGAGACAGGCTATTTGCCC
GAGAATTTCCTCCCCGAATTCCTGGATCTCGTCGTCTGGGGCCACGAACA
CGAGTGTTTAATCAACCCGCGATTGAACCCCGAGACCAAGTTTCACGTCA
TGCAGCCCGGCTCATCCGTGGCAACATCCCTGGTTCCTGGCGAATCAGTG
GCCAAACATGTAGCCATTCTCAGTATCACAGGCCGGGAGTTCAAATGCGA
GCCCATCCGTCTCAAGTCCGTCCGCCCATTCGCCATGCGCGAAATTATCC
TCTCCGAAGAAAAAGGCGCGCAAAAGCTTGCCCGCAAGGACAACAACCGC
ACGGAAGTGACTCGCCTTCTCATGGAGATTGTCGAGGAACTGATCGAAGA
AGCGAAAACAGAATGGCTAGAAATGCAAGATGAGACAGCAGAAGACGAAG
AGCTAGAAGTCCCACTACCACTAGTGCGACTGCGCGTTGAAACCTCAACG
CCAGAAGGAGGCAGTTATGACTGTGAGAACCCGCAGCGATTCTCCAACCG
CTTCGTAGGCAAGGTCGCCAATGTGAACGATGTCGTCCAGTTCTACCGCA
AGAAGAAAAACACCAACAGTACGCGCAAACCGGGTGAAACCGACCTCGAC
GAGACAGCAGTCTCACACCTCTCCACCCTCGACACCGTCAAAGTCGAACA
ATTAGTGCGCGACTTCCTCTCCGCACAGTCTCTGACCATCCTCCCACAGA
ACTCCTTCGGCGACGCAGTCGCCCAATTCATTGACAAAGACGACAAACAT
GCCTTGGAAATGTTCGTCAACGAATCACTCGAGAGCCAAATGAAGCACTT
ACTGGCTCTAGATCGCGACCACGATCTAGAGGAAGAAGAAGAAGTGGCAG
AAAGCTCCCTACAAAAAGCCATGGAGAGATATCGCACTCAAATGGAAGAC
ATGTTCTCCCGCGGTATCAAGAAACGCACCCGCGGCAAGAAGCGCTTCAA
GCCCAAGCCCGACGGCTGGGACACCGAATTCGACGGTGTCTGGGAGGACC
AACCCGGCGCTCTCATCCACTCCGACAACGAGGACGGCGATCCCAATGAA
GACGTAGCCGGTGAGGATGGCGCCGAACAACCCACCACATCACGAGCAAC
ATCATCCACACGCGGCCGCGGCCGAGGCCGTGGCGGTAGAGCCACCACCA
CTGCCGCTACAACCCGCAAAACCGCCACCACAAAAGCAGCACCTGCTACT
ACTACTTCAAAGAAAACCACAACCTCTACTAAAAGCCGTAAACGCCGCAC
CGTCTCCTCCGACGAAGAAGATGAACAAGAGGATGTCATAATGCTCGACG
ATGACGATGATGACGACGACGACAACGCAGCCACCTCCCTCCCCAACATA
GACGAAGAGGACGATGATGACGATGACTCCCTCTTCGTCAAACAACCCGC
CAAATCTACTACCAGTACTAGATCTCGCAGAACAACAACAGCAGCAACAG
CGAAAGCAACAACACAACGCCGCAAAGCTCCATCTCCAGCACCTTCATCC
AATACAGTTGGAGGAACCGGACAAGCTACGCGAAGAACTCGGGGCAAGCA
AGCAACTCAGACAACGCTGAATTTTGTAGGCTCGCAGAGTAGTGTGCGAG
GGACGGCGGGGTCTGGGAGATCAACGAGGGCTACGAGGGCGGCGAGTGAG
GATATTGAGGATGATAGTGATGCGTTTGAGCCGATGGCTAGTAGTGCGAG
GCGCAGATGAATGCCCAGATTAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030870Mre11 complex
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:00084083'-5' exonuclease activity
GO:0004519endonuclease activity
GO:0030145manganese ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006302double-strand break repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS23CBS51388_005512Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005512-T1CBS51388_005512-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005512-T1.cdsCBS51388_005512-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005512-T1.exon2CBS51388_005512-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005512-T1.exon1CBS51388_005512-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262GVX
DBxrefInterPro:IPR041796
DBxrefInterPro:IPR038487
DBxrefInterPro:IPR029052
DBxrefInterPro:IPR004843
DBxrefInterPro:IPR003701
DBxrefInterPro:IPR007281
DBxrefPFAM:PF04152
DBxrefPFAM:PF00149
ProductDouble-strand break repair protein mus-23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1739996..1742433 -
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