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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1923436..1925692- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005574-T1 ID=CBS51388_005574-T1|Name=CBS51388_005574-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2257bp|location=Sequence derived from alignment at An08:1923436..1925692- (Aspergillus niger CBS 513.88)
ATGACTTCTACCCGCCGCAACGGGCAGGCTCTGCCATGCGAGCCCTGCCG
CAAAGCCAAAATCCGCTGCGATGGTGCCACCCCAACATGCCAGAATTGCG
TCCGTCGTAACAAGGGAGACAGCTGTGCTTACACGCCCGTTCCGGCTTCT
CGTACCTGGTACTCGGACAATGCTCCCTCGCCCACCGCATCACCTCGTCC
CCAAACAGCCCAACCCCGCCCCGACTCCGCTGCTCTCCAGAATCGAGCCT
CCTTCAACGCCGGCGACGACAAATTATCTTTCGATTTCGCCACCAATAAA
TCAGCGACCTTTAGCGACATCGGCGACCAATTCAAACGCTCCCTGGTCAT
TGATGCGCCCTCCGCGGCTCGGCCCGATACGAAGCAGATCCAGCTTGGCG
CTCGACTGCTCACCTTACTGTTTGAGCATTTCGCACTGTATGAGCGACTG
TCTGAAACGGCCGTCGAGGTCTGGCCCGAGGGATGTGTCCTGGGTCATCG
GCTGGTGAGCGGGATGTTTGAGGCGTTGGAGGATTTGCATGGGTCGCTGG
CTGCGGATGCGAAGGACTTGCAGTCGAGTTTGCTTCGCTGGTCGCAAAAG
ATCTTTGAGGATAGTTCTAAGCCACTGGCTGTTCAGCCAACTATGTCGCC
GGATGACTATATTCGTCGGATTTCCGGACGGTGGGAGGGTATCGGACTGG
TGTTTACGATCGTTGGTCAGGGCGCTATGCTTGAGCGGGATTGGAGGTCT
ATCCGTTCGAGTGAGGCTAATGTGCCGAGGGATCAGAAGTCACTTGCCGC
TCAGGCTATTAGTGCGAGTGATGCTTGTTTGCAATTTTGTGATCTCTCTA
CGGCTGTCAATGATCCGTTGGGGTGGTTGCTTTTTCAGCACATTCATCTT
TTGACGTTGGTGTGTGGGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGTATTGGGGGACTGTGCTAA
TCAGGATATAGATCCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGACGA
CAGTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAACGTATTCCGTTC
TTCTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCTTACAGTATTGA
CAAGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGCGCT
ACTACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAGAGATACTGGCG
GAGCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGACAAGACTGGCTG
GAACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCGCATCGCCCTTC
TTATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGACGT
ATTGAGGATTTGCCGCGCAAAGTCCAGTAAGTGTGCCGCAACAGGTATTT
GAGGACTGCGGATCGGAGCTAATGTGCATTATAGGGAGGTTTCGCAGCAA
TCTCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCCGAG
TGATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATTGTATCTTAATT
TCCTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCACAA
AGCGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATTCTCAGCACGAT
CCTGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGGAACTTACAATG
TTGGATATAATGTGCGTGCTGTCACCCCTTCGCTTCCTGCACTTCCTGCA
CTTTCGTACTTACCTATCTTTAGGCTGCGTCTTTCGGTGTCCCAGCAGCC
GGCGTCTTAGCAATCGAGCTGCTCTGCCAAGCCGAATCCCAGTCCCAGCT
TCCCGCCAGCGTCTTCCGGCGATCGGAAGTCATCCAAAAACTGACTGTCT
TCGCTTCGCACCTGCAGTATGTTGTCCGCCCGCACGATGGCATGTATGAG
GTCTGTCAGCGCGCGCGAAGGGTCATCTCGAGTATCCTGGATCGCATCCT
ATCGGTCAATCCTCCCGCACTGCCGGCTACTCTGCCGCCCGATGTTCTGG
CAACCAACTGGTTGAACGGAGAGATTGTTGTTCTGGACGATGGAATCGAT
CTTTTCCGCTGGATTGACAGCGCGTCTGACACCTCGCGAAGAGGTTCCTG
GGCTTGA back to topCoding sequence (CDS) from alignment at An08:1923436..1925692- >CBS51388_005574-T1 ID=CBS51388_005574-T1|Name=CBS51388_005574-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7548bp|location=Sequence derived from alignment at An08:1923436..1925692- (Aspergillus niger CBS 513.88)
GCTGCGTCTTTCGGTGTCCCAGCAGCCGGCGTCTTAGCAATCGAGCTGCT
CTGCCAAGCCGAATCCCAGTCCCAGCTTCCCGCCAGCGTCTTCCGGCGAT
CGGAAGTCATCCAAAAACTGACTGTCTTCGCTTCGCACCTGCAGTATGTT
GTCCGCCCGCACGATGGCATGTATGAGGTCTGTCAGCGCGCGCGAAGGGT
CATCTCGAGTATCCTGGATCGCATCCTATCGGTCAATCCTCCCGCACTGC
CGGCTACTCTGCCGCCCGATGTTCTGGCAACCAACTGGTTGAACGGAGAG
ATTGTTGTTCTGGACGATGGAATCGATCTTTTCCGCTGGATTGACAGCGC
GTCTGACACCTCGCGAAGAGGTTCCTGGGCTTGAGGAGGTTTCGCAGCAA
TCTCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCCGAG
TGATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATTGTATCTTAATT
TCCTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCACAA
AGCGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATTCTCAGCACGAT
CCTGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGGAACTTACAATG
TTGGATATAATATCCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGACGA
CAGTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAACGTATTCCGTTC
TTCTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCTTACAGTATTGA
CAAGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGCGCT
ACTACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAGAGATACTGGCG
GAGCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGACAAGACTGGCTG
GAACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCGCATCGCCCTTC
TTATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGACGT
ATTGAGGATTTGCCGCGCAAAGTCCAATGACTTCTACCCGCCGCAACGGG
CAGGCTCTGCCATGCGAGCCCTGCCGCAAAGCCAAAATCCGCTGCGATGG
TGCCACCCCAACATGCCAGAATTGCGTCCGTCGTAACAAGGGAGACAGCT
GTGCTTACACGCCCGTTCCGGCTTCTCGTACCTGGTACTCGGACAATGCT
CCCTCGCCCACCGCATCACCTCGTCCCCAAACAGCCCAACCCCGCCCCGA
CTCCGCTGCTCTCCAGAATCGAGCCTCCTTCAACGCCGGCGACGACAAAT
TATCTTTCGATTTCGCCACCAATAAATCAGCGACCTTTAGCGACATCGGC
GACCAATTCAAACGCTCCCTGGTCATTGATGCGCCCTCCGCGGCTCGGCC
CGATACGAAGCAGATCCAGCTTGGCGCTCGACTGCTCACCTTACTGTTTG
AGCATTTCGCACTGTATGAGCGACTGTCTGAAACGGCCGTCGAGGTCTGG
CCCGAGGGATGTGTCCTGGGTCATCGGCTGGTGAGCGGGATGTTTGAGGC
GTTGGAGGATTTGCATGGGTCGCTGGCTGCGGATGCGAAGGACTTGCAGT
CGAGTTTGCTTCGCTGGTCGCAAAAGATCTTTGAGGATAGTTCTAAGCCA
CTGGCTGTTCAGCCAACTATGTCGCCGGATGACTATATTCGTCGGATTTC
CGGACGGTGGGAGGGTATCGGACTGGTGTTTACGATCGTTGGTCAGGGCG
CTATGCTTGAGCGGGATTGGAGGTCTATCCGTTCGAGTGAGGCTAATGTG
CCGAGGGATCAGAAGTCACTTGCCGCTCAGGCTATTAGCTGCGTCTTTCG
GTGTCCCAGCAGCCGGCGTCTTAGCAATCGAGCTGCTCTGCCAAGCCGAA
TCCCAGTCCCAGCTTCCCGCCAGCGTCTTCCGGCGATCGGAAGTCATCCA
AAAACTGACTGTCTTCGCTTCGCACCTGCAGTATGTTGTCCGCCCGCACG
ATGGCATGTATGAGGTCTGTCAGCGCGCGCGAAGGGTCATCTCGAGTATC
CTGGATCGCATCCTATCGGTCAATCCTCCCGCACTGCCGGCTACTCTGCC
GCCCGATGTTCTGGCAACCAACTGGTTGAACGGAGAGATTGTTGTTCTGG
ACGATGGAATCGATCTTTTCCGCTGGATTGACAGCGCGTCTGACACCTCG
CGAAGAGGTTCCTGGGCTTGAGGAGGTTTCGCAGCAATCTCATAAGACAT
GGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCCGAGTGATCCGGACACC
AACGATAGCAGCGTTCTCGTTCCATTGTATCTTAATTTCCTCTACAATGA
CTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCACAAAGCGGATCCGAGG
GCTTGGTCAGTGTGTCACAAAACATTCTCAGCACGATCCTGGAGCTTATC
GGCAAGGAGATCGGCTCGAGAACAGGAACTTACAATGTTGGATATAATAT
CCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGACGACAGTGTTTACGCT
CAGTCATAATGCGCCTGAGGAGAAACGTATTCCGTTCTTCTTGCTTGAAC
TCCGCAAGCGACTAGTTGCCGGGGCTTACAGTATTGACAAGCAGCTGGCA
ACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGCGCTACTACGATGTGCA
GTTTCCTCTAGATTTGAGTTACGAAGAGATACTGGCGGAGCCAAAGGTCC
GCGAGGCTGCCATCAGCCTACTTGACAAGACTGGCTGGAACACCCAGGGT
ATTGTGGGACAGGCTGCGTGGATGCGCATCGCCCTTCTTATTGGATCTAC
GAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGACGTATTGAGGATTTGC
CGCGCAAAGTCCAATGACTTCTACCCGCCGCAACGGGCAGGCTCTGCCAT
GCGAGCCCTGCCGCAAAGCCAAAATCCGCTGCGATGGTGCCACCCCAACA
TGCCAGAATTGCGTCCGTCGTAACAAGGGAGACAGCTGTGCTTACACGCC
CGTTCCGGCTTCTCGTACCTGGTACTCGGACAATGCTCCCTCGCCCACCG
CATCACCTCGTCCCCAAACAGCCCAACCCCGCCCCGACTCCGCTGCTCTC
CAGAATCGAGCCTCCTTCAACGCCGGCGACGACAAATTATCTTTCGATTT
CGCCACCAATAAATCAGCGACCTTTAGCGACATCGGCGACCAATTCAAAC
GCTCCCTGGTCATTGATGCGCCCTCCGCGGCTCGGCCCGATACGAAGCAG
ATCCAGCTTGGCGCTCGACTGCTCACCTTACTGTTTGAGCATTTCGCACT
GTATGAGCGACTGTCTGAAACGGCCGTCGAGGTCTGGCCCGAGGGATGTG
TCCTGGGTCATCGGCTGGTGAGCGGGATGTTTGAGGCGTTGGAGGATTTG
CATGGGTCGCTGGCTGCGGATGCGAAGGACTTGCAGTCGAGTTTGCTTCG
CTGGTCGCAAAAGATCTTTGAGGATAGTTCTAAGCCACTGGCTGTTCAGC
CAACTATGTCGCCGGATGACTATATTCGTCGGATTTCCGGACGGTGGGAG
GGTATCGGACTGGTGTTTACGATCGTTGGTCAGGGCGCTATGCTTGAGCG
GGATTGGAGGTCTATCCGTTCGAGTGAGGCTAATGTGCCGAGGGATCAGA
AGTCACTTGCCGCTCAGGCTATTAGCTGCGTCTTTCGGTGTCCCAGCAGC
CGGCGTCTTAGCAATCGAGCTGCTCTGCCAAGCCGAATCCCAGTCCCAGC
TTCCCGCCAGCGTCTTCCGGCGATCGGAAGTCATCCAAAAACTGACTGTC
TTCGCTTCGCACCTGCAGTATGTTGTCCGCCCGCACGATGGCATGTATGA
GGTCTGTCAGCGCGCGCGAAGGGTCATCTCGAGTATCCTGGATCGCATCC
TATCGGTCAATCCTCCCGCACTGCCGGCTACTCTGCCGCCCGATGTTCTG
GCAACCAACTGGTTGAACGGAGAGATTGTTGTTCTGGACGATGGAATCGA
TCTTTTCCGCTGGATTGACAGCGCGTCTGACACCTCGCGAAGAGGTTCCT
GGGCTTGAGGAGGTTTCGCAGCAATCTCATAAGACATGGAACGACCTGCC
TGGCTTCCTCCGCTGGCGCCCGAGTGATCCGGACACCAACGATAGCAGCG
TTCTCGTTCCATTGTATCTTAATTTCCTCTACAATGACTTCCTCCTCTAC
CGCGTTCTCGTGCGCCGGGCACAAAGCGGATCCGAGGGCTTGGTCAGTGT
GTCACAAAACATTCTCAGCACGATCCTGGAGCTTATCGGCAAGGAGATCG
GCTCGAGAACAGGAACTTACAATGTTGGATATAATATCCTCGGGCTTGGA
GAAGGCTGGCCGATCTTTCGACGACAGTGTTTACGCTCAGTCATAATGCG
CCTGAGGAGAAACGTATTCCGTTCTTCTTGCTTGAACTCCGCAAGCGACT
AGTTGCCGGGGCTTACAGTATTGACAAGCAGCTGGCAACCTTCTTGGGAA
GGCCTCCTCAGATCAGCTGGCGCTACTACGATGTGCAGTTTCCTCTAGAT
TTGAGTTACGAAGAGATACTGGCGGAGCCAAAGGTCCGCGAGGCTGCCAT
CAGCCTACTTGACAAGACTGGCTGGAACACCCAGGGTATTGTGGGACAGG
CTGCGTGGATGCGCATCGCCCTTCTTATTGGATCTACGAGAGAGCAGATC
CTAGAGCTGTCTCTGAGCCGACGTATTGAGGATTTGCCGCGCAAAGTCCA
ATGACTTCTACCCGCCGCAACGGGCAGGCTCTGCCATGCGAGCCCTGCCG
CAAAGCCAAAATCCGCTGCGATGGTGCCACCCCAACATGCCAGAATTGCG
TCCGTCGTAACAAGGGAGACAGCTGTGCTTACACGCCCGTTCCGGCTTCT
CGTACCTGGTACTCGGACAATGCTCCCTCGCCCACCGCATCACCTCGTCC
CCAAACAGCCCAACCCCGCCCCGACTCCGCTGCTCTCCAGAATCGAGCCT
CCTTCAACGCCGGCGACGACAAATTATCTTTCGATTTCGCCACCAATAAA
TCAGCGACCTTTAGCGACATCGGCGACCAATTCAAACGCTCCCTGGTCAT
TGATGCGCCCTCCGCGGCTCGGCCCGATACGAAGCAGATCCAGCTTGGCG
CTCGACTGCTCACCTTACTGTTTGAGCATTTCGCACTGTATGAGCGACTG
TCTGAAACGGCCGTCGAGGTCTGGCCCGAGGGATGTGTCCTGGGTCATCG
GCTGGTGAGCGGGATGTTTGAGGCGTTGGAGGATTTGCATGGGTCGCTGG
CTGCGGATGCGAAGGACTTGCAGTCGAGTTTGCTTCGCTGGTCGCAAAAG
ATCTTTGAGGATAGTTCTAAGCCACTGGCTGTTCAGCCAACTATGTCGCC
GGATGACTATATTCGTCGGATTTCCGGACGGTGGGAGGGTATCGGACTGG
TGTTTACGATCGTTGGTCAGGGCGCTATGCTTGAGCGGGATTGGAGGTCT
ATCCGTTCGAGTGAGGCTAATGTGCCGAGGGATCAGAAGTCACTTGCCGC
TCAGGCTATTAGCTGCGTCTTTCGGTGTCCCAGCAGCCGGCGTCTTAGCA
ATCGAGCTGCTCTGCCAAGCCGAATCCCAGTCCCAGCTTCCCGCCAGCGT
CTTCCGGCGATCGGAAGTCATCCAAAAACTGACTGTCTTCGCTTCGCACC
TGCAGTATGTTGTCCGCCCGCACGATGGCATGTATGAGGTCTGTCAGCGC
GCGCGAAGGGTCATCTCGAGTATCCTGGATCGCATCCTATCGGTCAATCC
TCCCGCACTGCCGGCTACTCTGCCGCCCGATGTTCTGGCAACCAACTGGT
TGAACGGAGAGATTGTTGTTCTGGACGATGGAATCGATCTTTTCCGCTGG
ATTGACAGCGCGTCTGACACCTCGCGAAGAGGTTCCTGGGCTTGAGGAGG
TTTCGCAGCAATCTCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGC
TGGCGCCCGAGTGATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATT
GTATCTTAATTTCCTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGC
GCCGGGCACAAAGCGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATT
CTCAGCACGATCCTGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGG
AACTTACAATGTTGGATATAATATCCTCGGGCTTGGAGAAGGCTGGCCGA
TCTTTCGACGACAGTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAAC
GTATTCCGTTCTTCTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCT
TACAGTATTGACAAGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGAT
CAGCTGGCGCTACTACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAG
AGATACTGGCGGAGCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGAC
AAGACTGGCTGGAACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCG
CATCGCCCTTCTTATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTC
TGAGCCGACGTATTGAGGATTTGCCGCGCAAAGTCCAATGACTTCTACCC
GCCGCAACGGGCAGGCTCTGCCATGCGAGCCCTGCCGCAAAGCCAAAATC
CGCTGCGATGGTGCCACCCCAACATGCCAGAATTGCGTCCGTCGTAACAA
GGGAGACAGCTGTGCTTACACGCCCGTTCCGGCTTCTCGTACCTGGTACT
CGGACAATGCTCCCTCGCCCACCGCATCACCTCGTCCCCAAACAGCCCAA
CCCCGCCCCGACTCCGCTGCTCTCCAGAATCGAGCCTCCTTCAACGCCGG
CGACGACAAATTATCTTTCGATTTCGCCACCAATAAATCAGCGACCTTTA
GCGACATCGGCGACCAATTCAAACGCTCCCTGGTCATTGATGCGCCCTCC
GCGGCTCGGCCCGATACGAAGCAGATCCAGCTTGGCGCTCGACTGCTCAC
CTTACTGTTTGAGCATTTCGCACTGTATGAGCGACTGTCTGAAACGGCCG
TCGAGGTCTGGCCCGAGGGATGTGTCCTGGGTCATCGGCTGGTGAGCGGG
ATGTTTGAGGCGTTGGAGGATTTGCATGGGTCGCTGGCTGCGGATGCGAA
GGACTTGCAGTCGAGTTTGCTTCGCTGGTCGCAAAAGATCTTTGAGGATA
GTTCTAAGCCACTGGCTGTTCAGCCAACTATGTCGCCGGATGACTATATT
CGTCGGATTTCCGGACGGTGGGAGGGTATCGGACTGGTGTTTACGATCGT
TGGTCAGGGCGCTATGCTTGAGCGGGATTGGAGGTCTATCCGTTCGAGTG
AGGCTAATGTGCCGAGGGATCAGAAGTCACTTGCCGCTCAGGCTATTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1923436..1925692 - |
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