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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1944286..1945368+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005581-T1 ID=CBS51388_005581-T1|Name=CBS51388_005581-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1083bp|location=Sequence derived from alignment at An08:1944286..1945368+ (Aspergillus niger CBS 513.88)
ATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACCCAGGGTGGTGC
AGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGATTCGGGCGCTCA
CACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTTCCAGAGGGATT
GAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTGGTAAAGGCCTT
TGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTTTGAGCCCTTCG
CAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATCAGCAAGGGGTC
AACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAGCTATACATTTG
GAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGCGGTTGTGGTGC
CCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCAAGCAGGACCAG
GTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTCTATACGTCCAA
CCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGGTAAGTTCGCCCTCCC
CGTGGAACTCTCCTTGTCGCCATGGCAGTAAACTCATTTTAACCCGCATT
GAACAGAATTCGATCGGCAAATTTGTCGCTTTTACTCCAGTGTCTGCACA
GACGAGGATTGCTTCCCTCGGTGCGATGTCTAATGTTGGTACTGCTGTTG
CAGGGCTAGTCGAGAATGATGGGCAGACTTTATGGACCAGCAAACTCGGC
GCTTCATCCAGTGGGGCCAAGTATGTCATCGTAACCACCACTTCTTATAC
TGTCCAGGACTACTACTCCGCATGGGCAAAAGCCATTGGAAAGGGTGAGG
ATCAGGTTAAGGTTCTGCCAATCTCCTTTGCGGACTACGAAGCTCTCTTT
GCGGAGTGGGGAACCGAGTTGGGCCTGATGATGAGATTTTGGGAAGTCGC
TGGGCCTGAGAAAAGCTGGGCTACTGTAGGACAGACTGACACCCTCATCG
ATAGCCGGGAATTGTTGGGGCCTTGCAAGACATTGGTCGAGACGGAGGAA
GCATTTGCTCAAGTCTCGTGGGACAACATATAA back to topCoding sequence (CDS) from alignment at An08:1944286..1945368+ >CBS51388_005581-T1 ID=CBS51388_005581-T1|Name=CBS51388_005581-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2022bp|location=Sequence derived from alignment at An08:1944286..1945368+ (Aspergillus niger CBS 513.88)
ATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACCCAGGGTGGTGC
AGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGATTCGGGCGCTCA
CACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTTCCAGAGGGATT
GAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTGGTAAAGGCCTT
TGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTTTGAGCCCTTCG
CAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATCAGCAAGGGGTC
AACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAGCTATACATTTG
GAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGCGGTTGTGGTGC
CCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCAAGCAGGACCAG
GTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTCTATACGTCCAA
CCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGAATTCGATCGGCAAAT
TTGTCGCTTTTACTCCAGTGTCTGCACAGACGAGGATTGCTTCCCTCGGT
GCGATGTCTAATGTTGGTACTGCTGTTGCAGGGCTAGTCGAGAATGATGG
GCAGACTTTATGGACCAGCAAACTCGGCGCTTCATCCAGTGGGGCCAAGT
ATGTCATCGTAACCACCACTTCTTATACTGTCCAGGACTACTACTCCGCA
TGGGCAAAAGCCATTGGAAAGGGTGAGGATCAGGTTAAGGTTCTGCCAAT
CTCCTTTGCGGACTACGAAGCTCTCTTTGCGGAGTGGGGAACCGAGTTGG
GCCTGATGATGAGATTTTGGGAAGTCGCTGGGCCTGAGAAAAGCTGGGCT
ACTGTAGGACAGACTGACACCCTCATCGATAGCCGGGAATTGTTGGGGCC
TTGCAAGACATTGGTCGAGACGGAGGAAGCATTTGCTCAAGTCTCGTGGG
ACAACATATAAATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACC
CAGGGTGGTGCAGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGAT
TCGGGCGCTCACACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTT
CCAGAGGGATTGAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTG
GTAAAGGCCTTTGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTT
TGAGCCCTTCGCAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATC
AGCAAGGGGTCAACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAG
CTATACATTTGGAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGC
GGTTGTGGTGCCCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCA
AGCAGGACCAGGTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTC
TATACGTCCAACCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGAATTC
GATCGGCAAATTTGTCGCTTTTACTCCAGTGTCTGCACAGACGAGGATTG
CTTCCCTCGGTGCGATGTCTAATGTTGGTACTGCTGTTGCAGGGCTAGTC
GAGAATGATGGGCAGACTTTATGGACCAGCAAACTCGGCGCTTCATCCAG
TGGGGCCAAGTATGTCATCGTAACCACCACTTCTTATACTGTCCAGGACT
ACTACTCCGCATGGGCAAAAGCCATTGGAAAGGGTGAGGATCAGGTTAAG
GTTCTGCCAATCTCCTTTGCGGACTACGAAGCTCTCTTTGCGGAGTGGGG
AACCGAGTTGGGCCTGATGATGAGATTTTGGGAAGTCGCTGGGCCTGAGA
AAAGCTGGGCTACTGTAGGACAGACTGACACCCTCATCGATAGCCGGGAA
TTGTTGGGGCCTTGCAAGACATTGGTCGAGACGGAGGAAGCATTTGCTCA
AGTCTCGTGGGACAACATATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1944286..1945368 + |
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