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CBS51388_005604-T1, CBS51388_005604-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005604-T1
Unique NameCBS51388_005604-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2008743..2010087+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005604-T1 ID=CBS51388_005604-T1|Name=CBS51388_005604-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1345bp|location=Sequence derived from alignment at An08:2008743..2010087+ (Aspergillus niger CBS 513.88)
ATGGTCTTAGTGACTCGCTCGCCAGCATTGCATGATGGGGACATTCAATT
TGCACAGAACGTTATTCCCCCTGACAACCACCCGTTGGCAGAGCTTACGA
ATTCCATTGTGTTCAGTAGCAAGGGGTATCGCGACCTACCTAGTCAGCTC
AGCGGGGGGGATCTCGACGGCGATATATTCAACGTCATTTGGGATACCGA
TGCGTATCCGGTGCGGACATTTGCGCCCGCGGATTATCCTCGCGTAAGCC
CAGTCGACATCGGGCGTCCAGTGGAGCGCGACGATATGGCACAGTTCTTC
CTTGACTTTATGAAAACTGACCATCTTGGGGTGATCGCCACAAGGCATAT
GATCATGGCTGACCAGGAAGCTGAGGGAACATCCCATCCGGTCTGCAGAA
AGCTGGCACAGTTGCACTCTACGGCGGTTGACTTTTCTAAGACGGGTATT
CCGGTCCAAATGTCGGAAATCCCTAAGGGAAAGCCTTTCAGACCTGACTT
GTACGTTATCACTACATGTTTTCAATAACCTATATATGGGTACTGTGATG
CTAACAAGTGAATTAGCATGGCACTAGGCCCGGTTGCACGTATCCACAAT
AAGTCCGACATCGAGCTGGAAGAGTATGTTATTCAAGCAGCATACGATGA
GGATGATGACATGGAGCCGTTCCACAAGTACTACAGATCAGAAAAAATAT
TGGGCAAGCTCTACAGGGGTGTAGATGAACGACAGATCTGGCAAGAAGAC
ATCCAGAGCAAAGTGCAGCCCAACGAAGACGAATTCTGGAACGAATTTCT
ATGGTCTACACTTGAGCGCTGTGACAAAATAGGAAATCTGTCATGGGAAC
TCTGGCTAGACGAAGCCCGGCACATTCGCCTGAGGTATGTCCGGAGACCC
TAGGTGCCCGAGGCTGACTGACAGTGGCTTCAGATACGAAGAGGCCGTAT
TCTCGGCAAGAAACAATTACTCCGAGCACCCTATAGACCCACTGAGTGAA
CTAGAGGTCTTTATTGGGTCCGTCATGAACAAAGGTGTACAGACCCGTCG
GCAGCGTGATCAATCTAACAAACTCGCCGATGAATTCGATCGCATCTCTA
CTTGGATTGTGGGTCAGATGCGCGCAGGGAGCTCGTCCGAGTCACCAATA
ACCAGTGTGTCGGATCAACTCAAACCTCTGGAGTTTTGTCTCGCCTGCAT
CCATGTCGGTGGTGAGAGCAACAAGGATCCCGCGCGCCGTCGTAGGGAAG
TGTACGGTGAGATTAAAAGCTTCCGGGTGGTTGCAGCGTGTGCTTTGCTG
TTTGAGCTTGACCTCATCGAAAAGGGGAGAAAGCGAAAGTTCTAA
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Coding sequence (CDS) from alignment at An08:2008743..2010087+

>CBS51388_005604-T1 ID=CBS51388_005604-T1|Name=CBS51388_005604-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3690bp|location=Sequence derived from alignment at An08:2008743..2010087+ (Aspergillus niger CBS 513.88)
ATGGTCTTAGTGACTCGCTCGCCAGCATTGCATGATGGGGACATTCAATT
TGCACAGAACGTTATTCCCCCTGACAACCACCCGTTGGCAGAGCTTACGA
ATTCCATTGTGTTCAGTAGCAAGGGGTATCGCGACCTACCTAGTCAGCTC
AGCGGGGGGGATCTCGACGGCGATATATTCAACGTCATTTGGGATACCGA
TGCGTATCCGGTGCGGACATTTGCGCCCGCGGATTATCCTCGCGTAAGCC
CAGTCGACATCGGGCGTCCAGTGGAGCGCGACGATATGGCACAGTTCTTC
CTTGACTTTATGAAAACTGACCATCTTGGGGTGATCGCCACAAGGCATAT
GATCATGGCTGACCAGGAAGCTGAGGGAACATCCCATCCGGTCTGCAGAA
AGCTGGCACAGTTGCACTCTACGGCGGTTGACTTTTCTAAGACGGGTATT
CCGGTCCAAATGTCGGAAATCCCTAAGGGAAAGCCTTTCAGACCTGACTT
CATGGCACTAGGCCCGGTTGCACGTATCCACAATAAGTCCGACATCGAGC
TGGAAGAGTATGTTATTCAAGCAGCATACGATGAGGATGATGACATGGAG
CCGTTCCACAAGTACTACAGATCAGAAAAAATATTGGGCAAGCTCTACAG
GGGTGTAGATGAACGACAGATCTGGCAAGAAGACATCCAGAGCAAAGTGC
AGCCCAACGAAGACGAATTCTGGAACGAATTTCTATGGTCTACACTTGAG
CGCTGTGACAAAATAGGAAATCTGTCATGGGAACTCTGGCTAGACGAAGC
CCGGCACATTCGCCTGAGATACGAAGAGGCCGTATTCTCGGCAAGAAACA
ATTACTCCGAGCACCCTATAGACCCACTGAGTGAACTAGAGGTCTTTATT
GGGTCCGTCATGAACAAAGGTGTACAGACCCGTCGGCAGCGTGATCAATC
TAACAAACTCGCCGATGAATTCGATCGCATCTCTACTTGGATTGTGGGTC
AGATGCGCGCAGGGAGCTCGTCCGAGTCACCAATAACCAGTGTGTCGGAT
CAACTCAAACCTCTGGAGTTTTGTCTCGCCTGCATCCATGTCGGTGGTGA
GAGCAACAAGGATCCCGCGCGCCGTCGTAGGGAAGTGTACGGTGAGATTA
AAAGCTTCCGGGTGGTTGCAGCGTGTGCTTTGCTGTTTGAGCTTGACCTC
ATCGAAAAGGGGAGAAAGCGAAAGTTCTAAATGGTCTTAGTGACTCGCTC
GCCAGCATTGCATGATGGGGACATTCAATTTGCACAGAACGTTATTCCCC
CTGACAACCACCCGTTGGCAGAGCTTACGAATTCCATTGTGTTCAGTAGC
AAGGGGTATCGCGACCTACCTAGTCAGCTCAGCGGGGGGGATCTCGACGG
CGATATATTCAACGTCATTTGGGATACCGATGCGTATCCGGTGCGGACAT
TTGCGCCCGCGGATTATCCTCGCGTAAGCCCAGTCGACATCGGGCGTCCA
GTGGAGCGCGACGATATGGCACAGTTCTTCCTTGACTTTATGAAAACTGA
CCATCTTGGGGTGATCGCCACAAGGCATATGATCATGGCTGACCAGGAAG
CTGAGGGAACATCCCATCCGGTCTGCAGAAAGCTGGCACAGTTGCACTCT
ACGGCGGTTGACTTTTCTAAGACGGGTATTCCGGTCCAAATGTCGGAAAT
CCCTAAGGGAAAGCCTTTCAGACCTGACTTCATGGCACTAGGCCCGGTTG
CACGTATCCACAATAAGTCCGACATCGAGCTGGAAGAGTATGTTATTCAA
GCAGCATACGATGAGGATGATGACATGGAGCCGTTCCACAAGTACTACAG
ATCAGAAAAAATATTGGGCAAGCTCTACAGGGGTGTAGATGAACGACAGA
TCTGGCAAGAAGACATCCAGAGCAAAGTGCAGCCCAACGAAGACGAATTC
TGGAACGAATTTCTATGGTCTACACTTGAGCGCTGTGACAAAATAGGAAA
TCTGTCATGGGAACTCTGGCTAGACGAAGCCCGGCACATTCGCCTGAGAT
ACGAAGAGGCCGTATTCTCGGCAAGAAACAATTACTCCGAGCACCCTATA
GACCCACTGAGTGAACTAGAGGTCTTTATTGGGTCCGTCATGAACAAAGG
TGTACAGACCCGTCGGCAGCGTGATCAATCTAACAAACTCGCCGATGAAT
TCGATCGCATCTCTACTTGGATTGTGGGTCAGATGCGCGCAGGGAGCTCG
TCCGAGTCACCAATAACCAGTGTGTCGGATCAACTCAAACCTCTGGAGTT
TTGTCTCGCCTGCATCCATGTCGGTGGTGAGAGCAACAAGGATCCCGCGC
GCCGTCGTAGGGAAGTGTACGGTGAGATTAAAAGCTTCCGGGTGGTTGCA
GCGTGTGCTTTGCTGTTTGAGCTTGACCTCATCGAAAAGGGGAGAAAGCG
AAAGTTCTAAATGGTCTTAGTGACTCGCTCGCCAGCATTGCATGATGGGG
ACATTCAATTTGCACAGAACGTTATTCCCCCTGACAACCACCCGTTGGCA
GAGCTTACGAATTCCATTGTGTTCAGTAGCAAGGGGTATCGCGACCTACC
TAGTCAGCTCAGCGGGGGGGATCTCGACGGCGATATATTCAACGTCATTT
GGGATACCGATGCGTATCCGGTGCGGACATTTGCGCCCGCGGATTATCCT
CGCGTAAGCCCAGTCGACATCGGGCGTCCAGTGGAGCGCGACGATATGGC
ACAGTTCTTCCTTGACTTTATGAAAACTGACCATCTTGGGGTGATCGCCA
CAAGGCATATGATCATGGCTGACCAGGAAGCTGAGGGAACATCCCATCCG
GTCTGCAGAAAGCTGGCACAGTTGCACTCTACGGCGGTTGACTTTTCTAA
GACGGGTATTCCGGTCCAAATGTCGGAAATCCCTAAGGGAAAGCCTTTCA
GACCTGACTTCATGGCACTAGGCCCGGTTGCACGTATCCACAATAAGTCC
GACATCGAGCTGGAAGAGTATGTTATTCAAGCAGCATACGATGAGGATGA
TGACATGGAGCCGTTCCACAAGTACTACAGATCAGAAAAAATATTGGGCA
AGCTCTACAGGGGTGTAGATGAACGACAGATCTGGCAAGAAGACATCCAG
AGCAAAGTGCAGCCCAACGAAGACGAATTCTGGAACGAATTTCTATGGTC
TACACTTGAGCGCTGTGACAAAATAGGAAATCTGTCATGGGAACTCTGGC
TAGACGAAGCCCGGCACATTCGCCTGAGATACGAAGAGGCCGTATTCTCG
GCAAGAAACAATTACTCCGAGCACCCTATAGACCCACTGAGTGAACTAGA
GGTCTTTATTGGGTCCGTCATGAACAAAGGTGTACAGACCCGTCGGCAGC
GTGATCAATCTAACAAACTCGCCGATGAATTCGATCGCATCTCTACTTGG
ATTGTGGGTCAGATGCGCGCAGGGAGCTCGTCCGAGTCACCAATAACCAG
TGTGTCGGATCAACTCAAACCTCTGGAGTTTTGTCTCGCCTGCATCCATG
TCGGTGGTGAGAGCAACAAGGATCCCGCGCGCCGTCGTAGGGAAGTGTAC
GGTGAGATTAAAAGCTTCCGGGTGGTTGCAGCGTGTGCTTTGCTGTTTGA
GCTTGACCTCATCGAAAAGGGGAGAAAGCGAAAGTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003968RNA-directed 5'-3' RNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005604CBS51388_005604Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005604-T1.exon1CBS51388_005604-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005604-T1.exon2CBS51388_005604-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005604-T1.exon3CBS51388_005604-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005604-T1.cdsCBS51388_005604-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005604-T1CBS51388_005604-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007855
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2008743..2010087 +
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