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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2408096..2408980- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005738-T1 ID=CBS51388_005738-T1|Name=CBS51388_005738-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=885bp|location=Sequence derived from alignment at An08:2408096..2408980- (Aspergillus niger CBS 513.88)
ATGTCCGCCCCCGTCAAGACCGGCAAGAAGACTCGCTCGGCCATCGCCGA
CGTTGTCACTCGCGAGTACACCATCAACATGCACAAGAGAGTACGTTGAA
CACAGCCAAAAACATGCACTTGAATTCATCACAATCTCGACTCTACCTGC
GAGCGATTTCCGCGGAACCTCGAAAACATGGAGGCAATTGGACGGAGAAC
AAAAAGACAAGCGGGAACCCGAATCCTCGTTCCTCCGCCCACCTCTACCA
CTCCCGAACTCGGAGAACAAGAGTGAAGAAGGAGAGGTTCAGGATGAGCT
TACCGCACCTGTCTGAAAAATTACATGTGTGGAGGAACAATCAGGAACCA
GATTGTCTTTTTTTTTCTGAAAGAGGAAAAAAAAACAAATCCCATAAAAA
GAAGAATTAGTTTGATGAAGTCCACCTCTATGGCCGCAATTTCGCAAAGC
AAAATTTCTCAAAATCACATCTATCAGATGGCATTCGGGCGGAAGACTAA
TATTCGTTCTTTTTTTGGGTATAGATGCACGGTGTTTCCTTCAAGAAGCG
TGCTCCTCGTGCTATCAAGGAGATCCGCGCTTTCGCCACCCGTGCTATGG
TTAGTACCCCCCTTCCCCCCATACTCAAATGGGGGAAAAAAAGAGAAACA
ACCACCTAACGCTATTCTCATTGAATAGGGCACCACCGACGTCCGTGTCG
ACCCCCAGCTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGCGTCCCC
TACCGTCTCCGTGTCCGCATCTCCCGCAAGCGTAACGACGAGGAGGGCGC
CAAGGAGAAGCTCTACTCCTACGTCCAGGCTGTCAACGTCAAGGATGTCA
AGGGTCTTCACACCGCCGTTGTCGATGAGGAGTAA back to topCoding sequence (CDS) from alignment at An08:2408096..2408980- >CBS51388_005738-T1 ID=CBS51388_005738-T1|Name=CBS51388_005738-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1116bp|location=Sequence derived from alignment at An08:2408096..2408980- (Aspergillus niger CBS 513.88)
GGCACCACCGACGTCCGTGTCGACCCCCAGCTCAACAAGAAGGTCTGGGA
AGCCGGTGTCAAGGGCGTCCCCTACCGTCTCCGTGTCCGCATCTCCCGCA
AGCGTAACGACGAGGAGGGCGCCAAGGAGAAGCTCTACTCCTACGTCCAG
GCTGTCAACGTCAAGGATGTCAAGGGTCTTCACACCGCCGTTGTCGATGA
GGAGTAAATGCACGGTGTTTCCTTCAAGAAGCGTGCTCCTCGTGCTATCA
AGGAGATCCGCGCTTTCGCCACCCGTGCTATGATGTCCGCCCCCGTCAAG
ACCGGCAAGAAGACTCGCTCGGCCATCGCCGACGTTGTCACTCGCGAGTA
CACCATCAACATGCACAAGAGAGGCACCACCGACGTCCGTGTCGACCCCC
AGCTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGCGTCCCCTACCGT
CTCCGTGTCCGCATCTCCCGCAAGCGTAACGACGAGGAGGGCGCCAAGGA
GAAGCTCTACTCCTACGTCCAGGCTGTCAACGTCAAGGATGTCAAGGGTC
TTCACACCGCCGTTGTCGATGAGGAGTAAATGCACGGTGTTTCCTTCAAG
AAGCGTGCTCCTCGTGCTATCAAGGAGATCCGCGCTTTCGCCACCCGTGC
TATGATGTCCGCCCCCGTCAAGACCGGCAAGAAGACTCGCTCGGCCATCG
CCGACGTTGTCACTCGCGAGTACACCATCAACATGCACAAGAGAGGCACC
ACCGACGTCCGTGTCGACCCCCAGCTCAACAAGAAGGTCTGGGAAGCCGG
TGTCAAGGGCGTCCCCTACCGTCTCCGTGTCCGCATCTCCCGCAAGCGTA
ACGACGAGGAGGGCGCCAAGGAGAAGCTCTACTCCTACGTCCAGGCTGTC
AACGTCAAGGATGTCAAGGGTCTTCACACCGCCGTTGTCGATGAGGAGTA
AATGCACGGTGTTTCCTTCAAGAAGCGTGCTCCTCGTGCTATCAAGGAGA
TCCGCGCTTTCGCCACCCGTGCTATGATGTCCGCCCCCGTCAAGACCGGC
AAGAAGACTCGCTCGGCCATCGCCGACGTTGTCACTCGCGAGTACACCAT
CAACATGCACAAGAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265EOF |
| DBxref | InterPro:IPR023621 |
| DBxref | InterPro:IPR000054 |
| DBxref | PFAM:PF01198 |
| Product | 60S ribosomal protein L31 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2408096..2408980 - |
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