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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2469642..2471792- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005758-T1 ID=CBS51388_005758-T1|Name=CBS51388_005758-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2151bp|location=Sequence derived from alignment at An08:2469642..2471792- (Aspergillus niger CBS 513.88)
ATGGGGAAGCTCAACTACCTTGGCGTAAGTCCTTCCATTGAGTATCAACA
CATGATAGCTCTAGAGAAGAGAGGCTGACGATAACTTGTTCCGTAGAGAA
AGATTAGAGGCATCAAAGCGGGCCAGGCCGTCTGGACTAGCCTGGTAGGT
GGCAGTGGAGTGGCCTGAATACTAGTGAACTAGACTGACGACTGCTTATA
GAAAAAGCGATTCCCGCCTGAAGATGGCAATAAGTCGACAAGCCATGAGG
CGGCTTTGCGGGACCCTGTTCTTGAAATCGATGTTACGGGGAAAGAACTG
ACGGATGAGGGCTTCAAGCAGTTCATCGATGTTTTGATCGAGTGCATCAA
GTACAAACATGCCGGGCATTCCAAGAGCATAGCACTAGTCACTGAGCTCC
ATTTGCAAGGTAACCAGCTCACTGTGGAGTCGTTGGCTAAATTAGCAGAG
GTAGTCACTTTATCAGAGGGTGACCTTCGGGAACTGGATCTTTCCAAGAA
CCAGCTTCACATCGAGACTGCGCAAGATGTCGAAAAGTGGGAGGCCTTCC
TCAAGGCATTCAAGCATTGTTGCCTGCTCAAGAAGCTTGATCTAAGTGGC
AACCCCCTCGGTTGTCTGGGCCTCGAGCACTTTGCGCGGGTCTACCTCAA
GAGTGACCTCGACTGGCTTCCGAGTGATGCTAAAGACATTTATGGTTCTG
ACATTGAAGAAGAAAGTAGTCTAGTCGAGGATACGGCTAGAATGAAGTTG
TCGGACAAAGAAAATGAGCCCAAGAGATCCAAAAGGTCGCCTAGTAAGGG
TAAAAAGGCTCGTCCGAAAAGTAAGTGCACGCACGGCTTCCTCGTCTAGG
TAAGCATTTGAAACTAACAGATGACCCTTTCAGGCCATACACAAATCGAT
ACGGCTGACTTGATAAAGTATACTTGTACTCGAGGTCTGCGTTCAATTCC
TCATCTCGTCCTATCGGAGATTGGACTGTCCAATACCAGCGCCCTTCATC
TGGAAAGCATGATCAGAATACAACAAACGCCGGAGCACCAACTCGACTTT
CTTCCTCCAGGGAAGTCTGTGACTCTGCCTCAAACTGCACCCCTGTGCAA
GAGCATAATTTGGCGCCCTACCAATGATCTCCCGCCATACACAGTGCGGC
TACTGGAGGTGGCAGAAAGCCTTCGTGATGTGATGTCCGATACAGAGCAT
GAAGGGCAGAATATGGGCAACGAGAATGACAGCACAGAGAAGTATGCCAG
CCGCGGCAGAAACAAAGGACAAGACCATGACGAGGTAGCCGCAAACCAGA
CTAAGAATGAGCTAAACCTTGAATACACCCGTCTCTGCAAGCGCGTTCAA
CTTGAGGCGATCAAGACAGAGGGAGTGCATAGCAGCACACTTTGGAGCAC
CGCACTGAAAATGATGCTCATTTCCCGGGCCATCTTGCTGGATGATGACG
ATCATCCGAGATCGGATAGTATGGTGGGAGGTGACGATGACGAGAATAAC
GAATCCGCGGACGAAGGCGAGGAAGAGGTGGAGTGGAGCGAAGATAATGA
CGGCTCATCTGATGGCCCATACTACGTTCATGTGGAATTCGTCGAGCCTC
GTGTCCGGACTCGTGTGCGGTTTGTTGAACCTAATACTGGTGCATACGCG
TATCCAGGTGAAGACATCGCGCACATGGGCCCTCCGGTCACCGAAGCTGC
CCCTGAAGAGGCTGAGGACCGCACCGGCCCACTTTACTCCCGTTCAGAAG
CGTTCGACTCCGAATTTCCCACCCTCCAGGAGGCATATGAACCATCCCCA
CCGATGAGAGCGGCTATCCCGACTGAAGTGATGTCAACCCCTCCTGCAAC
GCCCCCGAACACACGTACAAGGAACAAGGACCTTGATGAAAACCGCGTGT
GCCGGTTCAACATTCCCTTTAAGGTGTGGCGACGAACAATTGCCTATGCC
GTCGGCGCGGATGGAATCCTCGACACTCATCAGCAGAATTGCATTCTAAT
GTATGCCGCTAGCTGGGAAGCCCTTGAATACGCGCAGACATTTCAAGGTG
CCGAGAAGCACCAACAAATTTGGAAGCTCCTCCAGACGCTGGGATGCTTC
AACTACAGCATGGGGAGGATGATGAATCCCAGCCAGCTAAACGTGTCCTG
A back to topCoding sequence (CDS) from alignment at An08:2469642..2471792- >CBS51388_005758-T1 ID=CBS51388_005758-T1|Name=CBS51388_005758-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7836bp|location=Sequence derived from alignment at An08:2469642..2471792- (Aspergillus niger CBS 513.88)
GCCATACACAAATCGATACGGCTGACTTGATAAAGTATACTTGTACTCGA
GGTCTGCGTTCAATTCCTCATCTCGTCCTATCGGAGATTGGACTGTCCAA
TACCAGCGCCCTTCATCTGGAAAGCATGATCAGAATACAACAAACGCCGG
AGCACCAACTCGACTTTCTTCCTCCAGGGAAGTCTGTGACTCTGCCTCAA
ACTGCACCCCTGTGCAAGAGCATAATTTGGCGCCCTACCAATGATCTCCC
GCCATACACAGTGCGGCTACTGGAGGTGGCAGAAAGCCTTCGTGATGTGA
TGTCCGATACAGAGCATGAAGGGCAGAATATGGGCAACGAGAATGACAGC
ACAGAGAAGTATGCCAGCCGCGGCAGAAACAAAGGACAAGACCATGACGA
GGTAGCCGCAAACCAGACTAAGAATGAGCTAAACCTTGAATACACCCGTC
TCTGCAAGCGCGTTCAACTTGAGGCGATCAAGACAGAGGGAGTGCATAGC
AGCACACTTTGGAGCACCGCACTGAAAATGATGCTCATTTCCCGGGCCAT
CTTGCTGGATGATGACGATCATCCGAGATCGGATAGTATGGTGGGAGGTG
ACGATGACGAGAATAACGAATCCGCGGACGAAGGCGAGGAAGAGGTGGAG
TGGAGCGAAGATAATGACGGCTCATCTGATGGCCCATACTACGTTCATGT
GGAATTCGTCGAGCCTCGTGTCCGGACTCGTGTGCGGTTTGTTGAACCTA
ATACTGGTGCATACGCGTATCCAGGTGAAGACATCGCGCACATGGGCCCT
CCGGTCACCGAAGCTGCCCCTGAAGAGGCTGAGGACCGCACCGGCCCACT
TTACTCCCGTTCAGAAGCGTTCGACTCCGAATTTCCCACCCTCCAGGAGG
CATATGAACCATCCCCACCGATGAGAGCGGCTATCCCGACTGAAGTGATG
TCAACCCCTCCTGCAACGCCCCCGAACACACGTACAAGGAACAAGGACCT
TGATGAAAACCGCGTGTGCCGGTTCAACATTCCCTTTAAGGTGTGGCGAC
GAACAATTGCCTATGCCGTCGGCGCGGATGGAATCCTCGACACTCATCAG
CAGAATTGCATTCTAATGTATGCCGCTAGCTGGGAAGCCCTTGAATACGC
GCAGACATTTCAAGGTGCCGAGAAGCACCAACAAATTTGGAAGCTCCTCC
AGACGCTGGGATGCTTCAACTACAGCATGGGGAGGATGATGAATCCCAGC
CAGCTAAACGTGTCCTGAAAAAAGCGATTCCCGCCTGAAGATGGCAATAA
GTCGACAAGCCATGAGGCGGCTTTGCGGGACCCTGTTCTTGAAATCGATG
TTACGGGGAAAGAACTGACGGATGAGGGCTTCAAGCAGTTCATCGATGTT
TTGATCGAGTGCATCAAGTACAAACATGCCGGGCATTCCAAGAGCATAGC
ACTAGTCACTGAGCTCCATTTGCAAGGTAACCAGCTCACTGTGGAGTCGT
TGGCTAAATTAGCAGAGGTAGTCACTTTATCAGAGGGTGACCTTCGGGAA
CTGGATCTTTCCAAGAACCAGCTTCACATCGAGACTGCGCAAGATGTCGA
AAAGTGGGAGGCCTTCCTCAAGGCATTCAAGCATTGTTGCCTGCTCAAGA
AGCTTGATCTAAGTGGCAACCCCCTCGGTTGTCTGGGCCTCGAGCACTTT
GCGCGGGTCTACCTCAAGAGTGACCTCGACTGGCTTCCGAGTGATGCTAA
AGACATTTATGGTTCTGACATTGAAGAAGAAAGTAGTCTAGTCGAGGATA
CGGCTAGAATGAAGTTGTCGGACAAAGAAAATGAGCCCAAGAGATCCAAA
AGGTCGCCTAGTAAGGGTAAAAAGGCTCGTCCGAAAAAGAAAGATTAGAG
GCATCAAAGCGGGCCAGGCCGTCTGGACTAGCCTGATGGGGAAGCTCAAC
TACCTTGGCGCCATACACAAATCGATACGGCTGACTTGATAAAGTATACT
TGTACTCGAGGTCTGCGTTCAATTCCTCATCTCGTCCTATCGGAGATTGG
ACTGTCCAATACCAGCGCCCTTCATCTGGAAAGCATGATCAGAATACAAC
AAACGCCGGAGCACCAACTCGACTTTCTTCCTCCAGGGAAGTCTGTGACT
CTGCCTCAAACTGCACCCCTGTGCAAGAGCATAATTTGGCGCCCTACCAA
TGATCTCCCGCCATACACAGTGCGGCTACTGGAGGTGGCAGAAAGCCTTC
GTGATGTGATGTCCGATACAGAGCATGAAGGGCAGAATATGGGCAACGAG
AATGACAGCACAGAGAAGTATGCCAGCCGCGGCAGAAACAAAGGACAAGA
CCATGACGAGGTAGCCGCAAACCAGACTAAGAATGAGCTAAACCTTGAAT
ACACCCGTCTCTGCAAGCGCGTTCAACTTGAGGCGATCAAGACAGAGGGA
GTGCATAGCAGCACACTTTGGAGCACCGCACTGAAAATGATGCTCATTTC
CCGGGCCATCTTGCTGGATGATGACGATCATCCGAGATCGGATAGTATGG
TGGGAGGTGACGATGACGAGAATAACGAATCCGCGGACGAAGGCGAGGAA
GAGGTGGAGTGGAGCGAAGATAATGACGGCTCATCTGATGGCCCATACTA
CGTTCATGTGGAATTCGTCGAGCCTCGTGTCCGGACTCGTGTGCGGTTTG
TTGAACCTAATACTGGTGCATACGCGTATCCAGGTGAAGACATCGCGCAC
ATGGGCCCTCCGGTCACCGAAGCTGCCCCTGAAGAGGCTGAGGACCGCAC
CGGCCCACTTTACTCCCGTTCAGAAGCGTTCGACTCCGAATTTCCCACCC
TCCAGGAGGCATATGAACCATCCCCACCGATGAGAGCGGCTATCCCGACT
GAAGTGATGTCAACCCCTCCTGCAACGCCCCCGAACACACGTACAAGGAA
CAAGGACCTTGATGAAAACCGCGTGTGCCGGTTCAACATTCCCTTTAAGG
TGTGGCGACGAACAATTGCCTATGCCGTCGGCGCGGATGGAATCCTCGAC
ACTCATCAGCAGAATTGCATTCTAATGTATGCCGCTAGCTGGGAAGCCCT
TGAATACGCGCAGACATTTCAAGGTGCCGAGAAGCACCAACAAATTTGGA
AGCTCCTCCAGACGCTGGGATGCTTCAACTACAGCATGGGGAGGATGATG
AATCCCAGCCAGCTAAACGTGTCCTGAAAAAAGCGATTCCCGCCTGAAGA
TGGCAATAAGTCGACAAGCCATGAGGCGGCTTTGCGGGACCCTGTTCTTG
AAATCGATGTTACGGGGAAAGAACTGACGGATGAGGGCTTCAAGCAGTTC
ATCGATGTTTTGATCGAGTGCATCAAGTACAAACATGCCGGGCATTCCAA
GAGCATAGCACTAGTCACTGAGCTCCATTTGCAAGGTAACCAGCTCACTG
TGGAGTCGTTGGCTAAATTAGCAGAGGTAGTCACTTTATCAGAGGGTGAC
CTTCGGGAACTGGATCTTTCCAAGAACCAGCTTCACATCGAGACTGCGCA
AGATGTCGAAAAGTGGGAGGCCTTCCTCAAGGCATTCAAGCATTGTTGCC
TGCTCAAGAAGCTTGATCTAAGTGGCAACCCCCTCGGTTGTCTGGGCCTC
GAGCACTTTGCGCGGGTCTACCTCAAGAGTGACCTCGACTGGCTTCCGAG
TGATGCTAAAGACATTTATGGTTCTGACATTGAAGAAGAAAGTAGTCTAG
TCGAGGATACGGCTAGAATGAAGTTGTCGGACAAAGAAAATGAGCCCAAG
AGATCCAAAAGGTCGCCTAGTAAGGGTAAAAAGGCTCGTCCGAAAAAGAA
AGATTAGAGGCATCAAAGCGGGCCAGGCCGTCTGGACTAGCCTGATGGGG
AAGCTCAACTACCTTGGCGCCATACACAAATCGATACGGCTGACTTGATA
AAGTATACTTGTACTCGAGGTCTGCGTTCAATTCCTCATCTCGTCCTATC
GGAGATTGGACTGTCCAATACCAGCGCCCTTCATCTGGAAAGCATGATCA
GAATACAACAAACGCCGGAGCACCAACTCGACTTTCTTCCTCCAGGGAAG
TCTGTGACTCTGCCTCAAACTGCACCCCTGTGCAAGAGCATAATTTGGCG
CCCTACCAATGATCTCCCGCCATACACAGTGCGGCTACTGGAGGTGGCAG
AAAGCCTTCGTGATGTGATGTCCGATACAGAGCATGAAGGGCAGAATATG
GGCAACGAGAATGACAGCACAGAGAAGTATGCCAGCCGCGGCAGAAACAA
AGGACAAGACCATGACGAGGTAGCCGCAAACCAGACTAAGAATGAGCTAA
ACCTTGAATACACCCGTCTCTGCAAGCGCGTTCAACTTGAGGCGATCAAG
ACAGAGGGAGTGCATAGCAGCACACTTTGGAGCACCGCACTGAAAATGAT
GCTCATTTCCCGGGCCATCTTGCTGGATGATGACGATCATCCGAGATCGG
ATAGTATGGTGGGAGGTGACGATGACGAGAATAACGAATCCGCGGACGAA
GGCGAGGAAGAGGTGGAGTGGAGCGAAGATAATGACGGCTCATCTGATGG
CCCATACTACGTTCATGTGGAATTCGTCGAGCCTCGTGTCCGGACTCGTG
TGCGGTTTGTTGAACCTAATACTGGTGCATACGCGTATCCAGGTGAAGAC
ATCGCGCACATGGGCCCTCCGGTCACCGAAGCTGCCCCTGAAGAGGCTGA
GGACCGCACCGGCCCACTTTACTCCCGTTCAGAAGCGTTCGACTCCGAAT
TTCCCACCCTCCAGGAGGCATATGAACCATCCCCACCGATGAGAGCGGCT
ATCCCGACTGAAGTGATGTCAACCCCTCCTGCAACGCCCCCGAACACACG
TACAAGGAACAAGGACCTTGATGAAAACCGCGTGTGCCGGTTCAACATTC
CCTTTAAGGTGTGGCGACGAACAATTGCCTATGCCGTCGGCGCGGATGGA
ATCCTCGACACTCATCAGCAGAATTGCATTCTAATGTATGCCGCTAGCTG
GGAAGCCCTTGAATACGCGCAGACATTTCAAGGTGCCGAGAAGCACCAAC
AAATTTGGAAGCTCCTCCAGACGCTGGGATGCTTCAACTACAGCATGGGG
AGGATGATGAATCCCAGCCAGCTAAACGTGTCCTGAAAAAAGCGATTCCC
GCCTGAAGATGGCAATAAGTCGACAAGCCATGAGGCGGCTTTGCGGGACC
CTGTTCTTGAAATCGATGTTACGGGGAAAGAACTGACGGATGAGGGCTTC
AAGCAGTTCATCGATGTTTTGATCGAGTGCATCAAGTACAAACATGCCGG
GCATTCCAAGAGCATAGCACTAGTCACTGAGCTCCATTTGCAAGGTAACC
AGCTCACTGTGGAGTCGTTGGCTAAATTAGCAGAGGTAGTCACTTTATCA
GAGGGTGACCTTCGGGAACTGGATCTTTCCAAGAACCAGCTTCACATCGA
GACTGCGCAAGATGTCGAAAAGTGGGAGGCCTTCCTCAAGGCATTCAAGC
ATTGTTGCCTGCTCAAGAAGCTTGATCTAAGTGGCAACCCCCTCGGTTGT
CTGGGCCTCGAGCACTTTGCGCGGGTCTACCTCAAGAGTGACCTCGACTG
GCTTCCGAGTGATGCTAAAGACATTTATGGTTCTGACATTGAAGAAGAAA
GTAGTCTAGTCGAGGATACGGCTAGAATGAAGTTGTCGGACAAAGAAAAT
GAGCCCAAGAGATCCAAAAGGTCGCCTAGTAAGGGTAAAAAGGCTCGTCC
GAAAAAGAAAGATTAGAGGCATCAAAGCGGGCCAGGCCGTCTGGACTAGC
CTGATGGGGAAGCTCAACTACCTTGGCGCCATACACAAATCGATACGGCT
GACTTGATAAAGTATACTTGTACTCGAGGTCTGCGTTCAATTCCTCATCT
CGTCCTATCGGAGATTGGACTGTCCAATACCAGCGCCCTTCATCTGGAAA
GCATGATCAGAATACAACAAACGCCGGAGCACCAACTCGACTTTCTTCCT
CCAGGGAAGTCTGTGACTCTGCCTCAAACTGCACCCCTGTGCAAGAGCAT
AATTTGGCGCCCTACCAATGATCTCCCGCCATACACAGTGCGGCTACTGG
AGGTGGCAGAAAGCCTTCGTGATGTGATGTCCGATACAGAGCATGAAGGG
CAGAATATGGGCAACGAGAATGACAGCACAGAGAAGTATGCCAGCCGCGG
CAGAAACAAAGGACAAGACCATGACGAGGTAGCCGCAAACCAGACTAAGA
ATGAGCTAAACCTTGAATACACCCGTCTCTGCAAGCGCGTTCAACTTGAG
GCGATCAAGACAGAGGGAGTGCATAGCAGCACACTTTGGAGCACCGCACT
GAAAATGATGCTCATTTCCCGGGCCATCTTGCTGGATGATGACGATCATC
CGAGATCGGATAGTATGGTGGGAGGTGACGATGACGAGAATAACGAATCC
GCGGACGAAGGCGAGGAAGAGGTGGAGTGGAGCGAAGATAATGACGGCTC
ATCTGATGGCCCATACTACGTTCATGTGGAATTCGTCGAGCCTCGTGTCC
GGACTCGTGTGCGGTTTGTTGAACCTAATACTGGTGCATACGCGTATCCA
GGTGAAGACATCGCGCACATGGGCCCTCCGGTCACCGAAGCTGCCCCTGA
AGAGGCTGAGGACCGCACCGGCCCACTTTACTCCCGTTCAGAAGCGTTCG
ACTCCGAATTTCCCACCCTCCAGGAGGCATATGAACCATCCCCACCGATG
AGAGCGGCTATCCCGACTGAAGTGATGTCAACCCCTCCTGCAACGCCCCC
GAACACACGTACAAGGAACAAGGACCTTGATGAAAACCGCGTGTGCCGGT
TCAACATTCCCTTTAAGGTGTGGCGACGAACAATTGCCTATGCCGTCGGC
GCGGATGGAATCCTCGACACTCATCAGCAGAATTGCATTCTAATGTATGC
CGCTAGCTGGGAAGCCCTTGAATACGCGCAGACATTTCAAGGTGCCGAGA
AGCACCAACAAATTTGGAAGCTCCTCCAGACGCTGGGATGCTTCAACTAC
AGCATGGGGAGGATGATGAATCCCAGCCAGCTAAACGTGTCCTGAAAAAA
GCGATTCCCGCCTGAAGATGGCAATAAGTCGACAAGCCATGAGGCGGCTT
TGCGGGACCCTGTTCTTGAAATCGATGTTACGGGGAAAGAACTGACGGAT
GAGGGCTTCAAGCAGTTCATCGATGTTTTGATCGAGTGCATCAAGTACAA
ACATGCCGGGCATTCCAAGAGCATAGCACTAGTCACTGAGCTCCATTTGC
AAGGTAACCAGCTCACTGTGGAGTCGTTGGCTAAATTAGCAGAGGTAGTC
ACTTTATCAGAGGGTGACCTTCGGGAACTGGATCTTTCCAAGAACCAGCT
TCACATCGAGACTGCGCAAGATGTCGAAAAGTGGGAGGCCTTCCTCAAGG
CATTCAAGCATTGTTGCCTGCTCAAGAAGCTTGATCTAAGTGGCAACCCC
CTCGGTTGTCTGGGCCTCGAGCACTTTGCGCGGGTCTACCTCAAGAGTGA
CCTCGACTGGCTTCCGAGTGATGCTAAAGACATTTATGGTTCTGACATTG
AAGAAGAAAGTAGTCTAGTCGAGGATACGGCTAGAATGAAGTTGTCGGAC
AAAGAAAATGAGCCCAAGAGATCCAAAAGGTCGCCTAGTAAGGGTAAAAA
GGCTCGTCCGAAAAAGAAAGATTAGAGGCATCAAAGCGGGCCAGGCCGTC
TGGACTAGCCTGATGGGGAAGCTCAACTACCTTGGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR001611 |
| DBxref | PFAM:PF13516 |
| DBxref | PFAM:PF00560 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2469642..2471792 - |
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