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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2478188..2479792- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005761-T1 ID=CBS51388_005761-T1|Name=CBS51388_005761-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1605bp|location=Sequence derived from alignment at An08:2478188..2479792- (Aspergillus niger CBS 513.88)
ATGGGGGAGTCCGCCCAGCGCCAGTCCTCGGGACTGGGATCGGTTTGGAA
ACACCTGTCTTGGGCACTGGTAAGTCACCTATCCTATGCACACATTCGCC
ACTATGGCAATGCTGCTGCTTGTCTGGTAAAAGCTCTGGAATATGTAAAC
ACTGACATCGTGTTTTTGAAAATAGTTGACCGTGCAGTGTACGTCCTTTG
TCTTGGTGAGTCGCTCCCGTCGGCTTCGATCATAGCGTACCTGGTTGCTT
ATATCTTGTCCTCCCATAGCTATTGCATTATTCCAGGATTATGTCGCCCG
CTGGCGGCAAGCGCTACCTTACGTCAACCACCGTTTTCTTCAATGAGGTC
GTCAAGCTCGCCATCTCCCTGACCATGGCGCTCTACGAGGTTTCGAAGAC
AGCCCCTCCTTCAGTACCTGCGACTTCTCTTTTCTTCTCCCTCACAACTG
CCATATTTTCCGGTGATAGCTGGAAGCTTGCTATTCCTGCCTGTCTCTAT
ACGCTTGCGAATTCGCTGCAGTACATCGCTCTGTCGAACCTGCCGCCAGC
CACTTTCCAAGCATCATACCAATTGAAACTGATCGTTGTGGCCATAGCCA
GCTTGGTATTGCTCAAGAGACCTGTCTCGCTCCGGAAGTTGGGACTCATG
GTCCTTCTCTTGGCGGGCGTTGCTTTGGTGCAGATGCCCACTGGAAACCC
TGACGATATGACCCTCCAAGATGAGACCGCGCGTCTTGCATTCCCGCGGT
CTCTGGAAGAGTGGAAAGCCTCCAAGCTAGGACGTGAGAGTCTACATAAG
CGTTCTGCGACATATGAGGGGATTGAGGAGGATATGATGACCGCCAACCC
TCGACTAAATGCTACCGTTGGCCTCTTGGCCACAGTTGGCGCCTGCCTCG
CTTCCGGCGTTGCAAGCGTCTACTTCGAGAAAGTGCTGAAGGACAGTGCG
AAGTCGACTTCGCTCTGGATTCGCAACGTGCAGTTGTCCGTCTACTCGAT
ATTCCCGGCGCTTTTCATTGGGGTTGTTTTCTTGGATGGCGAGAAGGTTG
CTGCCAATGGCTTTTTCGAGGGCTACAACTGGATTGTTTGGTCTACTGTT
GTCGTACAGGCTATTGGTGGCATTGCCACGTCCTTCTACATTGGTTATGC
ATTCCGAGATGGCAAGAACATGGCCATGGCTGCGAGTATTGTACTCACCA
CGGTGGCTAGCGTTTGGCTATTTGAGTTTGAACTCACTGCCAATGTATGT
GACCCGTATTCCTCCCGTTGTGAGTAGGTGCTAATCTTCACAGTATCTCC
TGGGGTCGTTCGCAGTATTGGTGGTTACTTGCCTTTGCGAGGATGCAAAT
TCTGCATCTGCCCAGGCCAAGCGTCAGACCTTCCGTCCACCCCCAATCCG
CGTAGATCGCTATGAGAAGGAAAGCAAGAGTGGGGATGCTTCACCAGCCT
CCCCATCGCCTAACGAGATCTCCATAAAGCTTCCTGGTACGCCCTTTCTC
TCTACTGATGGGCTTTCGACGTCCAGGCCTACATCTCCGGGCCACGTACG
CGCTGGCCGCACCCCAAGCGGTGGATATTTCGAAAAGCACTCACGAGACA
ACTGA back to topCoding sequence (CDS) from alignment at An08:2478188..2479792- >CBS51388_005761-T1 ID=CBS51388_005761-T1|Name=CBS51388_005761-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5544bp|location=Sequence derived from alignment at An08:2478188..2479792- (Aspergillus niger CBS 513.88)
TATCTCCTGGGGTCGTTCGCAGTATTGGTGGTTACTTGCCTTTGCGAGGA
TGCAAATTCTGCATCTGCCCAGGCCAAGCGTCAGACCTTCCGTCCACCCC
CAATCCGCGTAGATCGCTATGAGAAGGAAAGCAAGAGTGGGGATGCTTCA
CCAGCCTCCCCATCGCCTAACGAGATCTCCATAAAGCTTCCTGGTACGCC
CTTTCTCTCTACTGATGGGCTTTCGACGTCCAGGCCTACATCTCCGGGCC
ACGTACGCGCTGGCCGCACCCCAAGCGGTGGATATTTCGAAAAGCACTCA
CGAGACAACTGACTATTGCATTATTCCAGGATTATGTCGCCCGCTGGCGG
CAAGCGCTACCTTACGTCAACCACCGTTTTCTTCAATGAGGTCGTCAAGC
TCGCCATCTCCCTGACCATGGCGCTCTACGAGGTTTCGAAGACAGCCCCT
CCTTCAGTACCTGCGACTTCTCTTTTCTTCTCCCTCACAACTGCCATATT
TTCCGGTGATAGCTGGAAGCTTGCTATTCCTGCCTGTCTCTATACGCTTG
CGAATTCGCTGCAGTACATCGCTCTGTCGAACCTGCCGCCAGCCACTTTC
CAAGCATCATACCAATTGAAACTGATCGTTGTGGCCATAGCCAGCTTGGT
ATTGCTCAAGAGACCTGTCTCGCTCCGGAAGTTGGGACTCATGGTCCTTC
TCTTGGCGGGCGTTGCTTTGGTGCAGATGCCCACTGGAAACCCTGACGAT
ATGACCCTCCAAGATGAGACCGCGCGTCTTGCATTCCCGCGGTCTCTGGA
AGAGTGGAAAGCCTCCAAGCTAGGACGTGAGAGTCTACATAAGCGTTCTG
CGACATATGAGGGGATTGAGGAGGATATGATGACCGCCAACCCTCGACTA
AATGCTACCGTTGGCCTCTTGGCCACAGTTGGCGCCTGCCTCGCTTCCGG
CGTTGCAAGCGTCTACTTCGAGAAAGTGCTGAAGGACAGTGCGAAGTCGA
CTTCGCTCTGGATTCGCAACGTGCAGTTGTCCGTCTACTCGATATTCCCG
GCGCTTTTCATTGGGGTTGTTTTCTTGGATGGCGAGAAGGTTGCTGCCAA
TGGCTTTTTCGAGGGCTACAACTGGATTGTTTGGTCTACTGTTGTCGTAC
AGGCTATTGGTGGCATTGCCACGTCCTTCTACATTGGTTATGCATTCCGA
GATGGCAAGAACATGGCCATGGCTGCGAGTATTGTACTCACCACGGTGGC
TAGCGTTTGGCTATTTGAGTTTGAACTCACTGCCAATTTGACCGTGCAGT
GTACGTCCTTTGTCTTGATGGGGGAGTCCGCCCAGCGCCAGTCCTCGGGA
CTGGGATCGGTTTGGAAACACCTGTCTTGGGCACTGTATCTCCTGGGGTC
GTTCGCAGTATTGGTGGTTACTTGCCTTTGCGAGGATGCAAATTCTGCAT
CTGCCCAGGCCAAGCGTCAGACCTTCCGTCCACCCCCAATCCGCGTAGAT
CGCTATGAGAAGGAAAGCAAGAGTGGGGATGCTTCACCAGCCTCCCCATC
GCCTAACGAGATCTCCATAAAGCTTCCTGGTACGCCCTTTCTCTCTACTG
ATGGGCTTTCGACGTCCAGGCCTACATCTCCGGGCCACGTACGCGCTGGC
CGCACCCCAAGCGGTGGATATTTCGAAAAGCACTCACGAGACAACTGACT
ATTGCATTATTCCAGGATTATGTCGCCCGCTGGCGGCAAGCGCTACCTTA
CGTCAACCACCGTTTTCTTCAATGAGGTCGTCAAGCTCGCCATCTCCCTG
ACCATGGCGCTCTACGAGGTTTCGAAGACAGCCCCTCCTTCAGTACCTGC
GACTTCTCTTTTCTTCTCCCTCACAACTGCCATATTTTCCGGTGATAGCT
GGAAGCTTGCTATTCCTGCCTGTCTCTATACGCTTGCGAATTCGCTGCAG
TACATCGCTCTGTCGAACCTGCCGCCAGCCACTTTCCAAGCATCATACCA
ATTGAAACTGATCGTTGTGGCCATAGCCAGCTTGGTATTGCTCAAGAGAC
CTGTCTCGCTCCGGAAGTTGGGACTCATGGTCCTTCTCTTGGCGGGCGTT
GCTTTGGTGCAGATGCCCACTGGAAACCCTGACGATATGACCCTCCAAGA
TGAGACCGCGCGTCTTGCATTCCCGCGGTCTCTGGAAGAGTGGAAAGCCT
CCAAGCTAGGACGTGAGAGTCTACATAAGCGTTCTGCGACATATGAGGGG
ATTGAGGAGGATATGATGACCGCCAACCCTCGACTAAATGCTACCGTTGG
CCTCTTGGCCACAGTTGGCGCCTGCCTCGCTTCCGGCGTTGCAAGCGTCT
ACTTCGAGAAAGTGCTGAAGGACAGTGCGAAGTCGACTTCGCTCTGGATT
CGCAACGTGCAGTTGTCCGTCTACTCGATATTCCCGGCGCTTTTCATTGG
GGTTGTTTTCTTGGATGGCGAGAAGGTTGCTGCCAATGGCTTTTTCGAGG
GCTACAACTGGATTGTTTGGTCTACTGTTGTCGTACAGGCTATTGGTGGC
ATTGCCACGTCCTTCTACATTGGTTATGCATTCCGAGATGGCAAGAACAT
GGCCATGGCTGCGAGTATTGTACTCACCACGGTGGCTAGCGTTTGGCTAT
TTGAGTTTGAACTCACTGCCAATTTGACCGTGCAGTGTACGTCCTTTGTC
TTGATGGGGGAGTCCGCCCAGCGCCAGTCCTCGGGACTGGGATCGGTTTG
GAAACACCTGTCTTGGGCACTGTATCTCCTGGGGTCGTTCGCAGTATTGG
TGGTTACTTGCCTTTGCGAGGATGCAAATTCTGCATCTGCCCAGGCCAAG
CGTCAGACCTTCCGTCCACCCCCAATCCGCGTAGATCGCTATGAGAAGGA
AAGCAAGAGTGGGGATGCTTCACCAGCCTCCCCATCGCCTAACGAGATCT
CCATAAAGCTTCCTGGTACGCCCTTTCTCTCTACTGATGGGCTTTCGACG
TCCAGGCCTACATCTCCGGGCCACGTACGCGCTGGCCGCACCCCAAGCGG
TGGATATTTCGAAAAGCACTCACGAGACAACTGACTATTGCATTATTCCA
GGATTATGTCGCCCGCTGGCGGCAAGCGCTACCTTACGTCAACCACCGTT
TTCTTCAATGAGGTCGTCAAGCTCGCCATCTCCCTGACCATGGCGCTCTA
CGAGGTTTCGAAGACAGCCCCTCCTTCAGTACCTGCGACTTCTCTTTTCT
TCTCCCTCACAACTGCCATATTTTCCGGTGATAGCTGGAAGCTTGCTATT
CCTGCCTGTCTCTATACGCTTGCGAATTCGCTGCAGTACATCGCTCTGTC
GAACCTGCCGCCAGCCACTTTCCAAGCATCATACCAATTGAAACTGATCG
TTGTGGCCATAGCCAGCTTGGTATTGCTCAAGAGACCTGTCTCGCTCCGG
AAGTTGGGACTCATGGTCCTTCTCTTGGCGGGCGTTGCTTTGGTGCAGAT
GCCCACTGGAAACCCTGACGATATGACCCTCCAAGATGAGACCGCGCGTC
TTGCATTCCCGCGGTCTCTGGAAGAGTGGAAAGCCTCCAAGCTAGGACGT
GAGAGTCTACATAAGCGTTCTGCGACATATGAGGGGATTGAGGAGGATAT
GATGACCGCCAACCCTCGACTAAATGCTACCGTTGGCCTCTTGGCCACAG
TTGGCGCCTGCCTCGCTTCCGGCGTTGCAAGCGTCTACTTCGAGAAAGTG
CTGAAGGACAGTGCGAAGTCGACTTCGCTCTGGATTCGCAACGTGCAGTT
GTCCGTCTACTCGATATTCCCGGCGCTTTTCATTGGGGTTGTTTTCTTGG
ATGGCGAGAAGGTTGCTGCCAATGGCTTTTTCGAGGGCTACAACTGGATT
GTTTGGTCTACTGTTGTCGTACAGGCTATTGGTGGCATTGCCACGTCCTT
CTACATTGGTTATGCATTCCGAGATGGCAAGAACATGGCCATGGCTGCGA
GTATTGTACTCACCACGGTGGCTAGCGTTTGGCTATTTGAGTTTGAACTC
ACTGCCAATTTGACCGTGCAGTGTACGTCCTTTGTCTTGATGGGGGAGTC
CGCCCAGCGCCAGTCCTCGGGACTGGGATCGGTTTGGAAACACCTGTCTT
GGGCACTGTATCTCCTGGGGTCGTTCGCAGTATTGGTGGTTACTTGCCTT
TGCGAGGATGCAAATTCTGCATCTGCCCAGGCCAAGCGTCAGACCTTCCG
TCCACCCCCAATCCGCGTAGATCGCTATGAGAAGGAAAGCAAGAGTGGGG
ATGCTTCACCAGCCTCCCCATCGCCTAACGAGATCTCCATAAAGCTTCCT
GGTACGCCCTTTCTCTCTACTGATGGGCTTTCGACGTCCAGGCCTACATC
TCCGGGCCACGTACGCGCTGGCCGCACCCCAAGCGGTGGATATTTCGAAA
AGCACTCACGAGACAACTGACTATTGCATTATTCCAGGATTATGTCGCCC
GCTGGCGGCAAGCGCTACCTTACGTCAACCACCGTTTTCTTCAATGAGGT
CGTCAAGCTCGCCATCTCCCTGACCATGGCGCTCTACGAGGTTTCGAAGA
CAGCCCCTCCTTCAGTACCTGCGACTTCTCTTTTCTTCTCCCTCACAACT
GCCATATTTTCCGGTGATAGCTGGAAGCTTGCTATTCCTGCCTGTCTCTA
TACGCTTGCGAATTCGCTGCAGTACATCGCTCTGTCGAACCTGCCGCCAG
CCACTTTCCAAGCATCATACCAATTGAAACTGATCGTTGTGGCCATAGCC
AGCTTGGTATTGCTCAAGAGACCTGTCTCGCTCCGGAAGTTGGGACTCAT
GGTCCTTCTCTTGGCGGGCGTTGCTTTGGTGCAGATGCCCACTGGAAACC
CTGACGATATGACCCTCCAAGATGAGACCGCGCGTCTTGCATTCCCGCGG
TCTCTGGAAGAGTGGAAAGCCTCCAAGCTAGGACGTGAGAGTCTACATAA
GCGTTCTGCGACATATGAGGGGATTGAGGAGGATATGATGACCGCCAACC
CTCGACTAAATGCTACCGTTGGCCTCTTGGCCACAGTTGGCGCCTGCCTC
GCTTCCGGCGTTGCAAGCGTCTACTTCGAGAAAGTGCTGAAGGACAGTGC
GAAGTCGACTTCGCTCTGGATTCGCAACGTGCAGTTGTCCGTCTACTCGA
TATTCCCGGCGCTTTTCATTGGGGTTGTTTTCTTGGATGGCGAGAAGGTT
GCTGCCAATGGCTTTTTCGAGGGCTACAACTGGATTGTTTGGTCTACTGT
TGTCGTACAGGCTATTGGTGGCATTGCCACGTCCTTCTACATTGGTTATG
CATTCCGAGATGGCAAGAACATGGCCATGGCTGCGAGTATTGTACTCACC
ACGGTGGCTAGCGTTTGGCTATTTGAGTTTGAACTCACTGCCAATTTGAC
CGTGCAGTGTACGTCCTTTGTCTTGATGGGGGAGTCCGCCCAGCGCCAGT
CCTCGGGACTGGGATCGGTTTGGAAACACCTGTCTTGGGCACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000139 | Golgi membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007271 |
| DBxref | PFAM:PF04142 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2478188..2479792 - |
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