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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2521347..2521877+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005773-T1 ID=CBS51388_005773-T1|Name=CBS51388_005773-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=531bp|location=Sequence derived from alignment at An08:2521347..2521877+ (Aspergillus niger CBS 513.88)
ATGGGAGCTGTCAGGAAAATCAAGACGAAGCGCAGGACCAGGTATGTAGG
CTAATATCTTCAACGATGAACATGATGATGGCCCTAGGTAGAAGGGTTGC
GTAAAGCTGAATAGACGCTAATGATCCGATACAATCGACAGAGACTATGA
TCAGGTCCGAGCTGATATCGCATCCGCGAGACACCTCGAGCTGTACAAAG
CTACGAAAGACGAGGAGGACCTTCCCGGCCTAGGAAAGCATTACTGCGTC
GAGTGCTCCAAATGGTTTGAGAGCGAGCATAACAAGGTCGCCCATACGAA
GGGCAAGAACCACAAGAGAAGGTGTGTGGCCAACATATCTACGGTGTCGC
TGCTGCGGGCGCAAGTACTTTTCTGGGCGCATAAATGCTAACCTATGCGC
TCGTTGTTAGACTCCGCATCTTGCGCGAAGAGGCACACACACAGAAGGCT
GCTGAGGCTGCTGTCGGCTTGGGTACAGACAATGGTGTGAGATCGCAAGA
GACCACCGAGATGGTCATTATGGAGGATTAG back to topCoding sequence (CDS) from alignment at An08:2521347..2521877+ >CBS51388_005773-T1 ID=CBS51388_005773-T1|Name=CBS51388_005773-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1026bp|location=Sequence derived from alignment at An08:2521347..2521877+ (Aspergillus niger CBS 513.88)
ATGGGAGCTGTCAGGAAAATCAAGACGAAGCGCAGGACCAGAGACTATGA
TCAGGTCCGAGCTGATATCGCATCCGCGAGACACCTCGAGCTGTACAAAG
CTACGAAAGACGAGGAGGACCTTCCCGGCCTAGGAAAGCATTACTGCGTC
GAGTGCTCCAAATGGTTTGAGAGCGAGCATAACAAGGTCGCCCATACGAA
GGGCAAGAACCACAAGAGAAGACTCCGCATCTTGCGCGAAGAGGCACACA
CACAGAAGGCTGCTGAGGCTGCTGTCGGCTTGGGTACAGACAATGGTGTG
AGATCGCAAGAGACCACCGAGATGGTCATTATGGAGGATTAGATGGGAGC
TGTCAGGAAAATCAAGACGAAGCGCAGGACCAGAGACTATGATCAGGTCC
GAGCTGATATCGCATCCGCGAGACACCTCGAGCTGTACAAAGCTACGAAA
GACGAGGAGGACCTTCCCGGCCTAGGAAAGCATTACTGCGTCGAGTGCTC
CAAATGGTTTGAGAGCGAGCATAACAAGGTCGCCCATACGAAGGGCAAGA
ACCACAAGAGAAGACTCCGCATCTTGCGCGAAGAGGCACACACACAGAAG
GCTGCTGAGGCTGCTGTCGGCTTGGGTACAGACAATGGTGTGAGATCGCA
AGAGACCACCGAGATGGTCATTATGGAGGATTAGATGGGAGCTGTCAGGA
AAATCAAGACGAAGCGCAGGACCAGAGACTATGATCAGGTCCGAGCTGAT
ATCGCATCCGCGAGACACCTCGAGCTGTACAAAGCTACGAAAGACGAGGA
GGACCTTCCCGGCCTAGGAAAGCATTACTGCGTCGAGTGCTCCAAATGGT
TTGAGAGCGAGCATAACAAGGTCGCCCATACGAAGGGCAAGAACCACAAG
AGAAGACTCCGCATCTTGCGCGAAGAGGCACACACACAGAAGGCTGCTGA
GGCTGCTGTCGGCTTGGGTACAGACAATGGTGTGAGATCGCAAGAGACCA
CCGAGATGGTCATTATGGAGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | InterPro:IPR022755 |
| DBxref | InterPro:IPR003604 |
| DBxref | PFAM:PF12171 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2521347..2521877 + |
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