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CBS51388_005780-T1, CBS51388_005780-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005780-T1
Unique NameCBS51388_005780-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2540142..2541898+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005780-T1 ID=CBS51388_005780-T1|Name=CBS51388_005780-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1757bp|location=Sequence derived from alignment at An08:2540142..2541898+ (Aspergillus niger CBS 513.88)
ATGACGCAACAGCCAAACGAGGCCATTCCAGCCAGCGATGTCGTGGAAGA
TGATACTAAAGAGCCCTTCCAACTGCCCGTTTCTGCTTCGGATACTAGTG
ACGATGTAGAGGCGAATAGCAGCGAGGAGCAGTGCGACACACAGTGTACT
ACGCCCGGAGAAAAGGGCGGAGAGAATTCAAATTCAAATGCAGGTCATGC
TTCGGAGAAATCCAGCGCTATCGTCCAAGACCAGCCAGAATCGACACCTG
AGGGACCTCCAGATGGCGGAACGGCAGCCTGGCTGACGGTTGTTGGAGGA
TTTTGCAGCATGTTCGTCAGTTTTGGCTGGACTAATTGTGAGTACTTGAT
GTTAGACTTTGTCGTGATATCGCAATATACACCTGCTGGAAGTCTCAGAT
GATTAAGGTGCTGTTGCTAACATTAAATCCAGGCATGGGGATATTCATCG
ATTACTACCAGACTCACCAACTGAGCGACATGTCCACCAGCTCCATAACA
TGGGTCACATCCCTAATGACATTCATGATGTTCTTCGGGGTCAGTCTCCT
CTCTCCAGCCCTAACGGAACTCCCAGCCACCATCACCACCATCATCACTC
CTCAACAACACACACTAACATCATCCAACAGGGGCCCTTCGTCGGCATCC
TCTTCGACAACTTCGGCCCCCGCTACATCATCCTAGCCGGCACTATCCTC
CACGTCCTTGGCATAATGATGACCTCCATTTCCACCGAATACTACCAATT
CCTCCTGGCCCAAGGCATCTGCAGCCCCATTGGTACCAGCGCGCTCTTCC
ACGCCAGCATCAACTCCATCAGCACCTGGTTCCGCCGTCGCCGCGCCCTT
GCCCTGGGCATCGCCACCGCCGGCGCCAGTCTCGGCGGCGTCATCCTCCC
CATCATGCTCACTCGACTCTTCCACCTCCTCAACTTCGGCTGGGCCATGC
GTATCTGCGGCTTCCTGATCCTCTTCCTCCTTGTCATCACCAACTTCACC
ATGACTTCTCGTCTCGTCCACACCAGAAAACAATACCATCTCCGCGATTT
TGTCCGCCCCCTGCGCGAACTCCCCTTCATCCTCACCACCGCCGGAACCT
TTTGCTTCTTCTGGGGCATGTTCCTCCCGTTTTCTTTCATTCCCTCACAG
GCTCAGCGCCACGGCATGTCTAATACCATGGCTTCGTACCTGATTCCTGT
TCTCAACGCAGCTAGGTAAGCCCACTAACCCAACCGATCCCAATCCTACC
CTTTCCTCCCCCCACCCAGGATAACCCACTAACACCCCCTCCCACTCCGG
GGAGGACTGGAATCGCAGTATCCCAGGCCGCATAATCCCCCCTTACCTCG
CGGACGTCTTCGGACGCTTCAACCTAATGATCCTCACGACGCTAGCATCT
GGGATCCTCGTTCTCGCGCTCTGGCTTCCTTCTACCGGCAACGCCCCTGC
CATCGTCTTCAGCGCCCTGTATGGCTTCACCTCCGGCACGGTGGTGAGTC
TTGCCCCTGCGCTGGTGGCTCAGATCTCTGAGATCAGGGAGATCGGTGTG
CGCAGCGGAACGTATTTCTGTATTGTTTCGTTTGCGGCGCTCACGGGGAC
GCCGATTGCGGGGGCCTTGTTGCCGGATCCCCTTGGGGGAAGTTATACGA
AGCTTTTTATATTTTGTGCGGTGGTCATGTTCTCGGGGGCGGGGTTTTAT
TGTGCTGCGAAGGGGAGGATTGGGGGGTGGAGGGGGTGGTGGGGAATGAG
GGTTTGA
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Coding sequence (CDS) from alignment at An08:2540142..2541898+

>CBS51388_005780-T1 ID=CBS51388_005780-T1|Name=CBS51388_005780-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5868bp|location=Sequence derived from alignment at An08:2540142..2541898+ (Aspergillus niger CBS 513.88)
ATGACGCAACAGCCAAACGAGGCCATTCCAGCCAGCGATGTCGTGGAAGA
TGATACTAAAGAGCCCTTCCAACTGCCCGTTTCTGCTTCGGATACTAGTG
ACGATGTAGAGGCGAATAGCAGCGAGGAGCAGTGCGACACACAGTGTACT
ACGCCCGGAGAAAAGGGCGGAGAGAATTCAAATTCAAATGCAGGTCATGC
TTCGGAGAAATCCAGCGCTATCGTCCAAGACCAGCCAGAATCGACACCTG
AGGGACCTCCAGATGGCGGAACGGCAGCCTGGCTGACGGTTGTTGGAGGA
TTTTGCAGCATGTTCGTCAGTTTTGGCTGGACTAATTGCATGGGGATATT
CATCGATTACTACCAGACTCACCAACTGAGCGACATGTCCACCAGCTCCA
TAACATGGGTCACATCCCTAATGACATTCATGATGTTCTTCGGGGGGCCC
TTCGTCGGCATCCTCTTCGACAACTTCGGCCCCCGCTACATCATCCTAGC
CGGCACTATCCTCCACGTCCTTGGCATAATGATGACCTCCATTTCCACCG
AATACTACCAATTCCTCCTGGCCCAAGGCATCTGCAGCCCCATTGGTACC
AGCGCGCTCTTCCACGCCAGCATCAACTCCATCAGCACCTGGTTCCGCCG
TCGCCGCGCCCTTGCCCTGGGCATCGCCACCGCCGGCGCCAGTCTCGGCG
GCGTCATCCTCCCCATCATGCTCACTCGACTCTTCCACCTCCTCAACTTC
GGCTGGGCCATGCGTATCTGCGGCTTCCTGATCCTCTTCCTCCTTGTCAT
CACCAACTTCACCATGACTTCTCGTCTCGTCCACACCAGAAAACAATACC
ATCTCCGCGATTTTGTCCGCCCCCTGCGCGAACTCCCCTTCATCCTCACC
ACCGCCGGAACCTTTTGCTTCTTCTGGGGCATGTTCCTCCCGTTTTCTTT
CATTCCCTCACAGGCTCAGCGCCACGGCATGTCTAATACCATGGCTTCGT
ACCTGATTCCTGTTCTCAACGCAGCTAGTATCCCAGGCCGCATAATCCCC
CCTTACCTCGCGGACGTCTTCGGACGCTTCAACCTAATGATCCTCACGAC
GCTAGCATCTGGGATCCTCGTTCTCGCGCTCTGGCTTCCTTCTACCGGCA
ACGCCCCTGCCATCGTCTTCAGCGCCCTGTATGGCTTCACCTCCGGCACG
GTGGTGAGTCTTGCCCCTGCGCTGGTGGCTCAGATCTCTGAGATCAGGGA
GATCGGTGTGCGCAGCGGAACGTATTTCTGTATTGTTTCGTTTGCGGCGC
TCACGGGGACGCCGATTGCGGGGGCCTTGTTGCCGGATCCCCTTGGGGGA
AGTTATACGAAGCTTTTTATATTTTGTGCGGTGGTCATGTTCTCGGGGGC
GGGGTTTTATTGTGCTGCGAAGGGGAGGATTGGGGGGTGGAGGGGGTGGT
GGGGAATGAGGGTTTGAATGACGCAACAGCCAAACGAGGCCATTCCAGCC
AGCGATGTCGTGGAAGATGATACTAAAGAGCCCTTCCAACTGCCCGTTTC
TGCTTCGGATACTAGTGACGATGTAGAGGCGAATAGCAGCGAGGAGCAGT
GCGACACACAGTGTACTACGCCCGGAGAAAAGGGCGGAGAGAATTCAAAT
TCAAATGCAGGTCATGCTTCGGAGAAATCCAGCGCTATCGTCCAAGACCA
GCCAGAATCGACACCTGAGGGACCTCCAGATGGCGGAACGGCAGCCTGGC
TGACGGTTGTTGGAGGATTTTGCAGCATGTTCGTCAGTTTTGGCTGGACT
AATTGCATGGGGATATTCATCGATTACTACCAGACTCACCAACTGAGCGA
CATGTCCACCAGCTCCATAACATGGGTCACATCCCTAATGACATTCATGA
TGTTCTTCGGGGGGCCCTTCGTCGGCATCCTCTTCGACAACTTCGGCCCC
CGCTACATCATCCTAGCCGGCACTATCCTCCACGTCCTTGGCATAATGAT
GACCTCCATTTCCACCGAATACTACCAATTCCTCCTGGCCCAAGGCATCT
GCAGCCCCATTGGTACCAGCGCGCTCTTCCACGCCAGCATCAACTCCATC
AGCACCTGGTTCCGCCGTCGCCGCGCCCTTGCCCTGGGCATCGCCACCGC
CGGCGCCAGTCTCGGCGGCGTCATCCTCCCCATCATGCTCACTCGACTCT
TCCACCTCCTCAACTTCGGCTGGGCCATGCGTATCTGCGGCTTCCTGATC
CTCTTCCTCCTTGTCATCACCAACTTCACCATGACTTCTCGTCTCGTCCA
CACCAGAAAACAATACCATCTCCGCGATTTTGTCCGCCCCCTGCGCGAAC
TCCCCTTCATCCTCACCACCGCCGGAACCTTTTGCTTCTTCTGGGGCATG
TTCCTCCCGTTTTCTTTCATTCCCTCACAGGCTCAGCGCCACGGCATGTC
TAATACCATGGCTTCGTACCTGATTCCTGTTCTCAACGCAGCTAGTATCC
CAGGCCGCATAATCCCCCCTTACCTCGCGGACGTCTTCGGACGCTTCAAC
CTAATGATCCTCACGACGCTAGCATCTGGGATCCTCGTTCTCGCGCTCTG
GCTTCCTTCTACCGGCAACGCCCCTGCCATCGTCTTCAGCGCCCTGTATG
GCTTCACCTCCGGCACGGTGGTGAGTCTTGCCCCTGCGCTGGTGGCTCAG
ATCTCTGAGATCAGGGAGATCGGTGTGCGCAGCGGAACGTATTTCTGTAT
TGTTTCGTTTGCGGCGCTCACGGGGACGCCGATTGCGGGGGCCTTGTTGC
CGGATCCCCTTGGGGGAAGTTATACGAAGCTTTTTATATTTTGTGCGGTG
GTCATGTTCTCGGGGGCGGGGTTTTATTGTGCTGCGAAGGGGAGGATTGG
GGGGTGGAGGGGGTGGTGGGGAATGAGGGTTTGAATGACGCAACAGCCAA
ACGAGGCCATTCCAGCCAGCGATGTCGTGGAAGATGATACTAAAGAGCCC
TTCCAACTGCCCGTTTCTGCTTCGGATACTAGTGACGATGTAGAGGCGAA
TAGCAGCGAGGAGCAGTGCGACACACAGTGTACTACGCCCGGAGAAAAGG
GCGGAGAGAATTCAAATTCAAATGCAGGTCATGCTTCGGAGAAATCCAGC
GCTATCGTCCAAGACCAGCCAGAATCGACACCTGAGGGACCTCCAGATGG
CGGAACGGCAGCCTGGCTGACGGTTGTTGGAGGATTTTGCAGCATGTTCG
TCAGTTTTGGCTGGACTAATTGCATGGGGATATTCATCGATTACTACCAG
ACTCACCAACTGAGCGACATGTCCACCAGCTCCATAACATGGGTCACATC
CCTAATGACATTCATGATGTTCTTCGGGGGGCCCTTCGTCGGCATCCTCT
TCGACAACTTCGGCCCCCGCTACATCATCCTAGCCGGCACTATCCTCCAC
GTCCTTGGCATAATGATGACCTCCATTTCCACCGAATACTACCAATTCCT
CCTGGCCCAAGGCATCTGCAGCCCCATTGGTACCAGCGCGCTCTTCCACG
CCAGCATCAACTCCATCAGCACCTGGTTCCGCCGTCGCCGCGCCCTTGCC
CTGGGCATCGCCACCGCCGGCGCCAGTCTCGGCGGCGTCATCCTCCCCAT
CATGCTCACTCGACTCTTCCACCTCCTCAACTTCGGCTGGGCCATGCGTA
TCTGCGGCTTCCTGATCCTCTTCCTCCTTGTCATCACCAACTTCACCATG
ACTTCTCGTCTCGTCCACACCAGAAAACAATACCATCTCCGCGATTTTGT
CCGCCCCCTGCGCGAACTCCCCTTCATCCTCACCACCGCCGGAACCTTTT
GCTTCTTCTGGGGCATGTTCCTCCCGTTTTCTTTCATTCCCTCACAGGCT
CAGCGCCACGGCATGTCTAATACCATGGCTTCGTACCTGATTCCTGTTCT
CAACGCAGCTAGTATCCCAGGCCGCATAATCCCCCCTTACCTCGCGGACG
TCTTCGGACGCTTCAACCTAATGATCCTCACGACGCTAGCATCTGGGATC
CTCGTTCTCGCGCTCTGGCTTCCTTCTACCGGCAACGCCCCTGCCATCGT
CTTCAGCGCCCTGTATGGCTTCACCTCCGGCACGGTGGTGAGTCTTGCCC
CTGCGCTGGTGGCTCAGATCTCTGAGATCAGGGAGATCGGTGTGCGCAGC
GGAACGTATTTCTGTATTGTTTCGTTTGCGGCGCTCACGGGGACGCCGAT
TGCGGGGGCCTTGTTGCCGGATCCCCTTGGGGGAAGTTATACGAAGCTTT
TTATATTTTGTGCGGTGGTCATGTTCTCGGGGGCGGGGTTTTATTGTGCT
GCGAAGGGGAGGATTGGGGGGTGGAGGGGGTGGTGGGGAATGAGGGTTTG
AATGACGCAACAGCCAAACGAGGCCATTCCAGCCAGCGATGTCGTGGAAG
ATGATACTAAAGAGCCCTTCCAACTGCCCGTTTCTGCTTCGGATACTAGT
GACGATGTAGAGGCGAATAGCAGCGAGGAGCAGTGCGACACACAGTGTAC
TACGCCCGGAGAAAAGGGCGGAGAGAATTCAAATTCAAATGCAGGTCATG
CTTCGGAGAAATCCAGCGCTATCGTCCAAGACCAGCCAGAATCGACACCT
GAGGGACCTCCAGATGGCGGAACGGCAGCCTGGCTGACGGTTGTTGGAGG
ATTTTGCAGCATGTTCGTCAGTTTTGGCTGGACTAATTGCATGGGGATAT
TCATCGATTACTACCAGACTCACCAACTGAGCGACATGTCCACCAGCTCC
ATAACATGGGTCACATCCCTAATGACATTCATGATGTTCTTCGGGGGGCC
CTTCGTCGGCATCCTCTTCGACAACTTCGGCCCCCGCTACATCATCCTAG
CCGGCACTATCCTCCACGTCCTTGGCATAATGATGACCTCCATTTCCACC
GAATACTACCAATTCCTCCTGGCCCAAGGCATCTGCAGCCCCATTGGTAC
CAGCGCGCTCTTCCACGCCAGCATCAACTCCATCAGCACCTGGTTCCGCC
GTCGCCGCGCCCTTGCCCTGGGCATCGCCACCGCCGGCGCCAGTCTCGGC
GGCGTCATCCTCCCCATCATGCTCACTCGACTCTTCCACCTCCTCAACTT
CGGCTGGGCCATGCGTATCTGCGGCTTCCTGATCCTCTTCCTCCTTGTCA
TCACCAACTTCACCATGACTTCTCGTCTCGTCCACACCAGAAAACAATAC
CATCTCCGCGATTTTGTCCGCCCCCTGCGCGAACTCCCCTTCATCCTCAC
CACCGCCGGAACCTTTTGCTTCTTCTGGGGCATGTTCCTCCCGTTTTCTT
TCATTCCCTCACAGGCTCAGCGCCACGGCATGTCTAATACCATGGCTTCG
TACCTGATTCCTGTTCTCAACGCAGCTAGTATCCCAGGCCGCATAATCCC
CCCTTACCTCGCGGACGTCTTCGGACGCTTCAACCTAATGATCCTCACGA
CGCTAGCATCTGGGATCCTCGTTCTCGCGCTCTGGCTTCCTTCTACCGGC
AACGCCCCTGCCATCGTCTTCAGCGCCCTGTATGGCTTCACCTCCGGCAC
GGTGGTGAGTCTTGCCCCTGCGCTGGTGGCTCAGATCTCTGAGATCAGGG
AGATCGGTGTGCGCAGCGGAACGTATTTCTGTATTGTTTCGTTTGCGGCG
CTCACGGGGACGCCGATTGCGGGGGCCTTGTTGCCGGATCCCCTTGGGGG
AAGTTATACGAAGCTTTTTATATTTTGTGCGGTGGTCATGTTCTCGGGGG
CGGGGTTTTATTGTGCTGCGAAGGGGAGGATTGGGGGGTGGAGGGGGTGG
TGGGGAATGAGGGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005780CBS51388_005780Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005780-T1.exon1CBS51388_005780-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005780-T1.exon2CBS51388_005780-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005780-T1.exon3CBS51388_005780-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005780-T1.exon4CBS51388_005780-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005780-T1.cdsCBS51388_005780-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005780-T1CBS51388_005780-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2540142..2541898 +
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