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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2557249..2558113- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005786-T1 ID=CBS51388_005786-T1|Name=CBS51388_005786-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=865bp|location=Sequence derived from alignment at An08:2557249..2558113- (Aspergillus niger CBS 513.88)
ATGGCAGAGCACGCAGAGCACACAGAGAGGAATCGTCAGTACTTTGAGTA
TGTGCACACCCATCTTTAGTTTTATTGATCATTTGTCTCACAATCTACAG
CAAGTTGGCCAAGTCCTACACCAACGACTTCAAGAGTGTCCTGGAATTTA
TTTGCAGGCTAGTGGATCGTCACCGTCCCTGGATCAGTGATGCATGGGTC
GACACGGAGGCTGGAAAGGGGAAAGAGATTAAGATGCTAGAGTATGCATG
TGGGACTGGGCCTGTGTCTTTGGTAAGTCACTATGTCTTACTAGATTTCC
TGTTGAAGCAGCCCTGTCATGAACCGCAAGCTGATTCCATAAGACATTGG
CACCTTTTGTGTCGAAAATCGTTGGACTCGACGTCTCAGATAATATGATT
AGCGAGTACAACAAGAATGCCGAAGAAGCGGGCTATGGAGACAAGATGGT
CGCGCTCAAGGGTGACCTTCTGGCTGAGACTGCTCCGGCAGAGCTCTCAG
GGCCCGAGTACTTTGACTTTGATCTCGTGGTTGTCAGCATGGCCCTTCAC
CACTTTGAGAGACCAGAATTAGCCATGGCCCGCTTTAGTGAACGTCTGAA
GAAAGGTGGTGTGTGCGTAATCGTCGACATTGTGCCAGACGATCACCACC
ATGGCCATTGTCACAAGGTTGAGCATGGCTTTGGCGATGCTGAGCATACG
GTCAAAAGCCACGGGTTTACCACGGAGCAGATACAGCAGCTATACGGAGG
AGCAGGGCTTGGGATGGGCTTCAAATATGATATTTCGAAGGAGCAGGTCG
TATTTCGCAAGGACGGAAAAGAGCATTTAAAGACCATATTTATTGCTCGT
GGGCAGCGTGCGTGA back to topCoding sequence (CDS) from alignment at An08:2557249..2558113- >CBS51388_005786-T1 ID=CBS51388_005786-T1|Name=CBS51388_005786-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2223bp|location=Sequence derived from alignment at An08:2557249..2558113- (Aspergillus niger CBS 513.88)
ACATTGGCACCTTTTGTGTCGAAAATCGTTGGACTCGACGTCTCAGATAA
TATGATTAGCGAGTACAACAAGAATGCCGAAGAAGCGGGCTATGGAGACA
AGATGGTCGCGCTCAAGGGTGACCTTCTGGCTGAGACTGCTCCGGCAGAG
CTCTCAGGGCCCGAGTACTTTGACTTTGATCTCGTGGTTGTCAGCATGGC
CCTTCACCACTTTGAGAGACCAGAATTAGCCATGGCCCGCTTTAGTGAAC
GTCTGAAGAAAGGTGGTGTGTGCGTAATCGTCGACATTGTGCCAGACGAT
CACCACCATGGCCATTGTCACAAGGTTGAGCATGGCTTTGGCGATGCTGA
GCATACGGTCAAAAGCCACGGGTTTACCACGGAGCAGATACAGCAGCTAT
ACGGAGGAGCAGGGCTTGGGATGGGCTTCAAATATGATATTTCGAAGGAG
CAGGTCGTATTTCGCAAGGACGGAAAAGAGCATTTAAAGACCATATTTAT
TGCTCGTGGGCAGCGTGCGTGACAAGTTGGCCAAGTCCTACACCAACGAC
TTCAAGAGTGTCCTGGAATTTATTTGCAGGCTAGTGGATCGTCACCGTCC
CTGGATCAGTGATGCATGGGTCGACACGGAGGCTGGAAAGGGGAAAGAGA
TTAAGATGCTAGAGTATGCATGTGGGACTGGGCCTGTGTCTTTGATGGCA
GAGCACGCAGAGCACACAGAGAGGAATCGTCAGTACTTTGAACATTGGCA
CCTTTTGTGTCGAAAATCGTTGGACTCGACGTCTCAGATAATATGATTAG
CGAGTACAACAAGAATGCCGAAGAAGCGGGCTATGGAGACAAGATGGTCG
CGCTCAAGGGTGACCTTCTGGCTGAGACTGCTCCGGCAGAGCTCTCAGGG
CCCGAGTACTTTGACTTTGATCTCGTGGTTGTCAGCATGGCCCTTCACCA
CTTTGAGAGACCAGAATTAGCCATGGCCCGCTTTAGTGAACGTCTGAAGA
AAGGTGGTGTGTGCGTAATCGTCGACATTGTGCCAGACGATCACCACCAT
GGCCATTGTCACAAGGTTGAGCATGGCTTTGGCGATGCTGAGCATACGGT
CAAAAGCCACGGGTTTACCACGGAGCAGATACAGCAGCTATACGGAGGAG
CAGGGCTTGGGATGGGCTTCAAATATGATATTTCGAAGGAGCAGGTCGTA
TTTCGCAAGGACGGAAAAGAGCATTTAAAGACCATATTTATTGCTCGTGG
GCAGCGTGCGTGACAAGTTGGCCAAGTCCTACACCAACGACTTCAAGAGT
GTCCTGGAATTTATTTGCAGGCTAGTGGATCGTCACCGTCCCTGGATCAG
TGATGCATGGGTCGACACGGAGGCTGGAAAGGGGAAAGAGATTAAGATGC
TAGAGTATGCATGTGGGACTGGGCCTGTGTCTTTGATGGCAGAGCACGCA
GAGCACACAGAGAGGAATCGTCAGTACTTTGAACATTGGCACCTTTTGTG
TCGAAAATCGTTGGACTCGACGTCTCAGATAATATGATTAGCGAGTACAA
CAAGAATGCCGAAGAAGCGGGCTATGGAGACAAGATGGTCGCGCTCAAGG
GTGACCTTCTGGCTGAGACTGCTCCGGCAGAGCTCTCAGGGCCCGAGTAC
TTTGACTTTGATCTCGTGGTTGTCAGCATGGCCCTTCACCACTTTGAGAG
ACCAGAATTAGCCATGGCCCGCTTTAGTGAACGTCTGAAGAAAGGTGGTG
TGTGCGTAATCGTCGACATTGTGCCAGACGATCACCACCATGGCCATTGT
CACAAGGTTGAGCATGGCTTTGGCGATGCTGAGCATACGGTCAAAAGCCA
CGGGTTTACCACGGAGCAGATACAGCAGCTATACGGAGGAGCAGGGCTTG
GGATGGGCTTCAAATATGATATTTCGAAGGAGCAGGTCGTATTTCGCAAG
GACGGAAAAGAGCATTTAAAGACCATATTTATTGCTCGTGGGCAGCGTGC
GTGACAAGTTGGCCAAGTCCTACACCAACGACTTCAAGAGTGTCCTGGAA
TTTATTTGCAGGCTAGTGGATCGTCACCGTCCCTGGATCAGTGATGCATG
GGTCGACACGGAGGCTGGAAAGGGGAAAGAGATTAAGATGCTAGAGTATG
CATGTGGGACTGGGCCTGTGTCTTTGATGGCAGAGCACGCAGAGCACACA
GAGAGGAATCGTCAGTACTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF01209 |
| DBxref | PFAM:PF13847 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08242 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2557249..2558113 - |
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