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CBS51388_005801-T1, CBS51388_005801-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005801-T1
Unique NameCBS51388_005801-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2597305..2598842+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005801-T1 ID=CBS51388_005801-T1|Name=CBS51388_005801-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1538bp|location=Sequence derived from alignment at An08:2597305..2598842+ (Aspergillus niger CBS 513.88)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGGTGAGCTACAGACCACTCTAGCGACTGTCAAGTCACATACAC
TAACAATATTGATTTAGATAACCTTGGTGCCATCCTGGCCGTCGCAGATG
TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACA
ATGCAGCAGGTTCTGGAGGCCCTGATCAAGGCGTATGAGATTCAGGGCTG
CTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTGGACCACACCATCC
TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCC
CGCGAGCAAGCCCTTAGTGCCGTATCTCACGCCTGGATGGACGGCCACCC
ACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGCTGGG
CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAG
GCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTT
CTACGATGTACTGTTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG
GCACCTGGGTCATTGAAACGGTGCTGTTTAAGGTGAACACGGCCGAGGGC
CATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCG
GGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA
CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGCGCAACTTTGCAT
AACGCCGCAGATCGTGACCACTGCCTGCGGTACATGGTCGCTGTGGTGCT
GCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGTCCCT
GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCA
GAAGACCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGT
GGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG
TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAG
GAGGTTTACGCAAAATCAGAGCGGAATCTGGGTCTTCGACTGTCGACAGA
TAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC
TACCAGCATGCCATTTTGTGAACCTTTTCAGTTTGTAA
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Coding sequence (CDS) from alignment at An08:2597305..2598842+

>CBS51388_005801-T1 ID=CBS51388_005801-T1|Name=CBS51388_005801-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2958bp|location=Sequence derived from alignment at An08:2597305..2598842+ (Aspergillus niger CBS 513.88)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGATAACCTTGGTGCCATCCTGGCCGTCGCAGATGTCCGCAGCC
GTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAG
GTTCTGGAGGCCCTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGAT
CAAGAATGCCTTCAACAAAGTCGGGTTGGACCACACCATCCTGGTCAAGA
TTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCCCGCGAGCAA
GCCCTTAGTGCCGTATCTCACGCCTGGATGGACGGCCACCCACTGCGCGT
GTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGCTGGGCAGCGGGTG
ATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAA
CCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGT
ACTGTTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACCTGGG
TCATTGAAACGGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATG
ACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGG
ACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAGGCTG
CTGGTATGACGATCATCAACAAGGGCGGCGCAACTTTGCATAACGCCGCA
GATCGTGACCACTGCCTGCGGTACATGGTCGCTGTGGTGCTGCTGAAGGG
AGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGTCCCTGGGCGACGG
ACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAAGACCCC
AAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTC
GCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTGGTAG
AATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAGGTTTAC
GCAAAATCAGAGCGGAATCTGGGTCTTCGACTGTCGACAGATAGAGTCCA
GCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGCTACCAGCAT
GCCATTTTGTGAACCTTTTCAGTTTGTAAATGACTGTCATTCCTGCCGCC
GACGACAACTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGA
CTATGTTTACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCA
AGGTCGCCTTGATGGATGCTCTTGGAGCTGCCCTCGAGAGTATCCATACC
AGTCCCCAATGTGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGC
CACCTCGGGTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATTC
TCAAGGGAGCCTTTGATCTGGGGGCCATGATCCGCTACCTCGACCACAAT
GATGCCTTTCCCGGTGCAGAATGGGGGCATCCCTCGGATAACCTTGGTGC
CATCCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCG
ACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGAGGCCCTGATCAAG
GCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGT
CGGGTTGGACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGG
CCTGGCTGCTAGATCTTCCCCGCGAGCAAGCCCTTAGTGCCGTATCTCAC
GCCTGGATGGACGGCCACCCACTGCGCGTGTACCGCCAGGCACCCAACAC
CGGTCCGCGCAAGGGCTGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGC
ATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTGCTG
ACCACGCCCCGCTGGGGTTTCTACGATGTACTGTTCAAGGGCCAGGAATT
CGATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAAACGGTGCTGTTTA
AGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCGCTG
GAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATAT
CCAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACA
AGGGCGGCGCAACTTTGCATAACGCCGCAGATCGTGACCACTGCCTGCGG
TACATGGTCGCTGTGGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGA
CTACCAGGACGACAGTCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGC
GCCAGAAGATCACCATGGCAGAAGACCCCAAATACACAGCCGATTATCAT
GATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGA
CGGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCC
GACGCCCGGAGACGCCGCAGGAGGTTTACGCAAAATCAGAGCGGAATCTG
GGTCTTCGACTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGC
ATCGGAGGAGTTTATGTCGCTACCAGCATGCCATTTTGTGAACCTTTTCA
GTTTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005801CBS51388_005801Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005801-T1.exon1CBS51388_005801-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005801-T1.exon2CBS51388_005801-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005801-T1.cdsCBS51388_005801-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005801-T1CBS51388_005801-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8.6
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR012705
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR005656
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2597305..2598842 +
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