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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2830091..2832965+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005861-T1 ID=CBS51388_005861-T1|Name=CBS51388_005861-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2875bp|location=Sequence derived from alignment at An08:2830091..2832965+ (Aspergillus niger CBS 513.88)
ATGACGGACTACCGCACGCTGAAAAAGACCCAGTTTGAAGCCATGGAGGC
GGTCCTGCAGCAGTTCCGGCCCCGGTTGCTGCAGAATATTCCCCCGGATT
TCTTCGAGATCTTCCTGTACAACCGCCTGCCAGCAGCCCGGTTTGCGTTC
GAACAATGGATGGACGAGGAGATGCTGCATGAGCCTCTTGATTCCAGCAA
ATTCGACCACGCTTTTGACCCGCAGCCAAGTTGACCTGCCCTTTGTAGCT
CTAGCTTCAGATACTCGGTCCGTGTTAGAATGAGTGTCCTGCAGAGGAGC
GTGGAACATCCCGCGCGTCTCTGTGCGTTGATACGCTTATTGATCTGTGA
GATGCAGCCAATACTTTGGAATGTTGCAGCATTAATTACAATATCGTACT
GTGCAGCGCCTTATAAGCCATGCCTGAATTTGAATTCTTCCACTATGAGT
TTCCCGAATTCTAGACTGTTCATACCGGAATGCGGCATCCGGCATCTGGA
TCAATCTATACTAGCACGCGGTAGTAGAAATCCGAGAGGCACTCCCATGC
ATTCTAGATGCAGTGGTAGTGTGAGATAGCATGGCACGGGATTGCAAGGT
TGCTTGCTATCAGCCATGTGTGTGGGAACGGCCTTGGCATCCAGAGAGAG
TGCGTGCCCTCATATGGGGCATCGCCGCTGCATACCATCATATGGATTTA
CGGTTCTCGAGACGTTAGTTGTGGGACTGATCTACATGAAAAGCGCAGCC
TGGCTCCATTAGAGACAACGCCTCTCAAGAGATCCTTTGGGATATATTTG
TTCCTGCCGAGGCCCACAAGCCAGGTACGCGGACGCCACGGTATAAAGGT
ATCGTAACCCAGCTGCTTCGAGGAGCCAACAGGCCCATCTCGGCGCGTGT
ACCTTCCTAGAGCCTCGCTGTTACCTCCTGGTGTGACCACATCTCAGCCA
AGCTCTCTTTTGCACGATCCCAAGAACACCTACCACCTCCTATGACCAGC
ATGTTGCTGCTGGACCTACCGGGGGAGCTCTTACTTTGTGTCATGGACCA
TCTGGAGCGGGCCAAGGACATCCATTCTCTGTGTCTCACCAATTCGCATG
TACATCGACAGCTGCTACCGGTGCTCTATCGCTTCAACGTACGGTTCGAA
AACAGCTCGGCGCTGCACTGGGCGGCGCGTTATGGTAAGCTGGAACTTGT
CCAGACGATGTGTTATTACCGGGCCCGCGTCAATGTGTATCTCCATGGCT
ACACACCTCTTCATGTTGCCGCAATGTTCGGACAGGCACCCGTTGTGAGA
TGGCTGCTTTCGTACGACGGCATTGATGTCAACTGCCGCGGCGAGGGACT
GGGCTTGACCCCGCTTGGTGTAGCGGTGCGGAGGGAGGATGTAGAGGTTG
TTCAGGTGTTGCTTTCAGATGCCCGTACGGATATCAACGCAGGAAGCCGA
GACAACAAGACACCGCTGCTGGATGCCATCAAGCATCGGCACCTCGTCAT
TCTGCGATTGCTTCTGGCCGATGCGAGAATTGAGATGCATCCACAGGGCC
AGTCAGCCTCGCCATTGATGTACGCCATGCGCAAAGACTTTGGCTGCGGC
GGTCGCGCGCTCCTAGCGCATGGCGACATTGACGTCTCAGCACGAGACTT
GAAGGACCGGACGGTTCTGCACTATGCTGTTCTGCACAACGATGACGGAC
TTGTGCAGCTCTTGCTTCAGAAGCAGGACCTTGATGTGAACGCGCAGGAT
TGTCTTGGTATGACCGCCCTGCATCGTGCCATCATCAAAGACAATAGACG
AATCGTCGCCCTGCTCCTGACACGCAGTGACCTTGATGTCTCGCTTTGCG
GTGCCGATGGGCACTGGAAGATATACGAAGAAATGCCGCCATTATGTCTG
GCCGTTGCCCTCCGCAGGAACCGCATCTGCCAGCTTCTGCTGGAAGCCCC
TACGGATGCCGATGTGCGCACGGCCAGCGGGAATTCCCCCTTACATCTAG
CCGCAGGCATGGCGGATCTTGATTTGCTCACGCTCTTGCTCAACCAACCA
GACATCAAGCTAAACGGCCGGAACGACGACGGGTTCACAGCTCTGCATGA
AGCCACAACCCGCGGGTACCTGTCCGTTGCCAAGCTGCTCCTCGCTGCGC
CAGAGGTGGATGCAAATGTGGGAGATACATGTGGGCGGACCGCACTCTGG
TGGGCGACGAAGCGCTCTGACGAGATTCTGACAAAGCGGCTGCTATGCGA
AGACGACCTCGATCTTAATGTTGTAGGCCGGGATGGATCAACATCCCTCC
ATCATGCGATCCAGTACCGGAACCGAACCATAGCACGGCTACTTCTCTGC
GAGGAGAGACTGGATATCAATGTACCGGGCATGACCGGTTGGACTCCACT
TGTGTGGGCCGTGCATCAAGCAGACATTAACATGGCCAGACTGTTGCTTG
CGAGAGACGATCTGCAGCTGGATCCAATCTGCGCGGGAAACGCATCGGCA
CTGGGCCTGGCAGCGGGACGAGGCCACACCAAGATTGTGAACTTATTCCT
CGAGCACCGGGATCGCTTGGACATTAATCTCCCAACCCTGGCAGGCGAGA
CCCCACTATGCCGGGCCGCAGCAGCCGGGCATCATGATGTGGTCGATCTC
CTCCTTCAAGATCCTCAGCTGGATGTCAACCGGGCGGACCTCATTGGACG
CAGTCCGCTGTGCTGGGCGGTGTATGCGGGACAGTTCAACGTTGTGAGAC
GTTTGCTTCAGGACAGAAGAGTCGTGATTGAAGGGGATTACTTCCGGCGA
CCAGCACTGGCGGCCGCTCATGAGATGGGACATGCAGAAATTGCTGATCT
TCTTAAAGCATATAGACTCGGATGA back to topCoding sequence (CDS) from alignment at An08:2830091..2832965+ >CBS51388_005861-T1 ID=CBS51388_005861-T1|Name=CBS51388_005861-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6714bp|location=Sequence derived from alignment at An08:2830091..2832965+ (Aspergillus niger CBS 513.88)
ATGACGGACTACCGCACGCTGAAAAAGACCCAGTTTGAAGCCATGGAGGC
GGTCCTGCAGCAGTTCCGGCCCCGGTTGCTGCAGAATATTCCCCCGGATT
TCTTCGAGATCTTCCTGTACAACCGCCTGCCAGCAGCCCGGTTTGCGTTC
GAACAATGGATGGACGAGGAGATGCTGCATGAGCCTCTTGATTCCAGCAA
ATTCGACCACGCTTTTGACCCGCAGCCAACGCAGCCTGGCTCCATTAGAG
ACAACGCCTCTCAAGAGATCCTTTGGGATATATTTGTTCCTGCCGAGGCC
CACAAGCCAGCCAAGCTCTCTTTTGCACGATCCCAAGAACACCTACCACC
TCCTATGACCAGCATGTTGCTGCTGGACCTACCGGGGGAGCTCTTACTTT
GTGTCATGGACCATCTGGAGCGGGCCAAGGACATCCATTCTCTGTGTCTC
ACCAATTCGCATGTACATCGACAGCTGCTACCGGTGCTCTATCGCTTCAA
CGTACGGTTCGAAAACAGCTCGGCGCTGCACTGGGCGGCGCGTTATGGTA
AGCTGGAACTTGTCCAGACGATGTGTTATTACCGGGCCCGCGTCAATGTG
TATCTCCATGGCTACACACCTCTTCATGTTGCCGCAATGTTCGGACAGGC
ACCCGTTGTGAGATGGCTGCTTTCGTACGACGGCATTGATGTCAACTGCC
GCGGCGAGGGACTGGGCTTGACCCCGCTTGGTGTAGCGGTGCGGAGGGAG
GATGTAGAGGTTGTTCAGGTGTTGCTTTCAGATGCCCGTACGGATATCAA
CGCAGGAAGCCGAGACAACAAGACACCGCTGCTGGATGCCATCAAGCATC
GGCACCTCGTCATTCTGCGATTGCTTCTGGCCGATGCGAGAATTGAGATG
CATCCACAGGGCCAGTCAGCCTCGCCATTGATGTACGCCATGCGCAAAGA
CTTTGGCTGCGGCGGTCGCGCGCTCCTAGCGCATGGCGACATTGACGTCT
CAGCACGAGACTTGAAGGACCGGACGGTTCTGCACTATGCTGTTCTGCAC
AACGATGACGGACTTGTGCAGCTCTTGCTTCAGAAGCAGGACCTTGATGT
GAACGCGCAGGATTGTCTTGGTATGACCGCCCTGCATCGTGCCATCATCA
AAGACAATAGACGAATCGTCGCCCTGCTCCTGACACGCAGTGACCTTGAT
GTCTCGCTTTGCGGTGCCGATGGGCACTGGAAGATATACGAAGAAATGCC
GCCATTATGTCTGGCCGTTGCCCTCCGCAGGAACCGCATCTGCCAGCTTC
TGCTGGAAGCCCCTACGGATGCCGATGTGCGCACGGCCAGCGGGAATTCC
CCCTTACATCTAGCCGCAGGCATGGCGGATCTTGATTTGCTCACGCTCTT
GCTCAACCAACCAGACATCAAGCTAAACGGCCGGAACGACGACGGGTTCA
CAGCTCTGCATGAAGCCACAACCCGCGGGTACCTGTCCGTTGCCAAGCTG
CTCCTCGCTGCGCCAGAGGTGGATGCAAATGTGGGAGATACATGTGGGCG
GACCGCACTCTGGTGGGCGACGAAGCGCTCTGACGAGATTCTGACAAAGC
GGCTGCTATGCGAAGACGACCTCGATCTTAATGTTGTAGGCCGGGATGGA
TCAACATCCCTCCATCATGCGATCCAGTACCGGAACCGAACCATAGCACG
GCTACTTCTCTGCGAGGAGAGACTGGATATCAATGTACCGGGCATGACCG
GTTGGACTCCACTTGTGTGGGCCGTGCATCAAGCAGACATTAACATGGCC
AGACTGTTGCTTGCGAGAGACGATCTGCAGCTGGATCCAATCTGCGCGGG
AAACGCATCGGCACTGGGCCTGGCAGCGGGACGAGGCCACACCAAGATTG
TGAACTTATTCCTCGAGCACCGGGATCGCTTGGACATTAATCTCCCAACC
CTGGCAGGCGAGACCCCACTATGCCGGGCCGCAGCAGCCGGGCATCATGA
TGTGGTCGATCTCCTCCTTCAAGATCCTCAGCTGGATGTCAACCGGGCGG
ACCTCATTGGACGCAGTCCGCTGTGCTGGGCGGTGTATGCGGGACAGTTC
AACGTTGTGAGACGTTTGCTTCAGGACAGAAGAGTCGTGATTGAAGGGGA
TTACTTCCGGCGACCAGCACTGGCGGCCGCTCATGAGATGGGACATGCAG
AAATTGCTGATCTTCTTAAAGCATATAGACTCGGATGAATGACGGACTAC
CGCACGCTGAAAAAGACCCAGTTTGAAGCCATGGAGGCGGTCCTGCAGCA
GTTCCGGCCCCGGTTGCTGCAGAATATTCCCCCGGATTTCTTCGAGATCT
TCCTGTACAACCGCCTGCCAGCAGCCCGGTTTGCGTTCGAACAATGGATG
GACGAGGAGATGCTGCATGAGCCTCTTGATTCCAGCAAATTCGACCACGC
TTTTGACCCGCAGCCAACGCAGCCTGGCTCCATTAGAGACAACGCCTCTC
AAGAGATCCTTTGGGATATATTTGTTCCTGCCGAGGCCCACAAGCCAGCC
AAGCTCTCTTTTGCACGATCCCAAGAACACCTACCACCTCCTATGACCAG
CATGTTGCTGCTGGACCTACCGGGGGAGCTCTTACTTTGTGTCATGGACC
ATCTGGAGCGGGCCAAGGACATCCATTCTCTGTGTCTCACCAATTCGCAT
GTACATCGACAGCTGCTACCGGTGCTCTATCGCTTCAACGTACGGTTCGA
AAACAGCTCGGCGCTGCACTGGGCGGCGCGTTATGGTAAGCTGGAACTTG
TCCAGACGATGTGTTATTACCGGGCCCGCGTCAATGTGTATCTCCATGGC
TACACACCTCTTCATGTTGCCGCAATGTTCGGACAGGCACCCGTTGTGAG
ATGGCTGCTTTCGTACGACGGCATTGATGTCAACTGCCGCGGCGAGGGAC
TGGGCTTGACCCCGCTTGGTGTAGCGGTGCGGAGGGAGGATGTAGAGGTT
GTTCAGGTGTTGCTTTCAGATGCCCGTACGGATATCAACGCAGGAAGCCG
AGACAACAAGACACCGCTGCTGGATGCCATCAAGCATCGGCACCTCGTCA
TTCTGCGATTGCTTCTGGCCGATGCGAGAATTGAGATGCATCCACAGGGC
CAGTCAGCCTCGCCATTGATGTACGCCATGCGCAAAGACTTTGGCTGCGG
CGGTCGCGCGCTCCTAGCGCATGGCGACATTGACGTCTCAGCACGAGACT
TGAAGGACCGGACGGTTCTGCACTATGCTGTTCTGCACAACGATGACGGA
CTTGTGCAGCTCTTGCTTCAGAAGCAGGACCTTGATGTGAACGCGCAGGA
TTGTCTTGGTATGACCGCCCTGCATCGTGCCATCATCAAAGACAATAGAC
GAATCGTCGCCCTGCTCCTGACACGCAGTGACCTTGATGTCTCGCTTTGC
GGTGCCGATGGGCACTGGAAGATATACGAAGAAATGCCGCCATTATGTCT
GGCCGTTGCCCTCCGCAGGAACCGCATCTGCCAGCTTCTGCTGGAAGCCC
CTACGGATGCCGATGTGCGCACGGCCAGCGGGAATTCCCCCTTACATCTA
GCCGCAGGCATGGCGGATCTTGATTTGCTCACGCTCTTGCTCAACCAACC
AGACATCAAGCTAAACGGCCGGAACGACGACGGGTTCACAGCTCTGCATG
AAGCCACAACCCGCGGGTACCTGTCCGTTGCCAAGCTGCTCCTCGCTGCG
CCAGAGGTGGATGCAAATGTGGGAGATACATGTGGGCGGACCGCACTCTG
GTGGGCGACGAAGCGCTCTGACGAGATTCTGACAAAGCGGCTGCTATGCG
AAGACGACCTCGATCTTAATGTTGTAGGCCGGGATGGATCAACATCCCTC
CATCATGCGATCCAGTACCGGAACCGAACCATAGCACGGCTACTTCTCTG
CGAGGAGAGACTGGATATCAATGTACCGGGCATGACCGGTTGGACTCCAC
TTGTGTGGGCCGTGCATCAAGCAGACATTAACATGGCCAGACTGTTGCTT
GCGAGAGACGATCTGCAGCTGGATCCAATCTGCGCGGGAAACGCATCGGC
ACTGGGCCTGGCAGCGGGACGAGGCCACACCAAGATTGTGAACTTATTCC
TCGAGCACCGGGATCGCTTGGACATTAATCTCCCAACCCTGGCAGGCGAG
ACCCCACTATGCCGGGCCGCAGCAGCCGGGCATCATGATGTGGTCGATCT
CCTCCTTCAAGATCCTCAGCTGGATGTCAACCGGGCGGACCTCATTGGAC
GCAGTCCGCTGTGCTGGGCGGTGTATGCGGGACAGTTCAACGTTGTGAGA
CGTTTGCTTCAGGACAGAAGAGTCGTGATTGAAGGGGATTACTTCCGGCG
ACCAGCACTGGCGGCCGCTCATGAGATGGGACATGCAGAAATTGCTGATC
TTCTTAAAGCATATAGACTCGGATGAATGACGGACTACCGCACGCTGAAA
AAGACCCAGTTTGAAGCCATGGAGGCGGTCCTGCAGCAGTTCCGGCCCCG
GTTGCTGCAGAATATTCCCCCGGATTTCTTCGAGATCTTCCTGTACAACC
GCCTGCCAGCAGCCCGGTTTGCGTTCGAACAATGGATGGACGAGGAGATG
CTGCATGAGCCTCTTGATTCCAGCAAATTCGACCACGCTTTTGACCCGCA
GCCAACGCAGCCTGGCTCCATTAGAGACAACGCCTCTCAAGAGATCCTTT
GGGATATATTTGTTCCTGCCGAGGCCCACAAGCCAGCCAAGCTCTCTTTT
GCACGATCCCAAGAACACCTACCACCTCCTATGACCAGCATGTTGCTGCT
GGACCTACCGGGGGAGCTCTTACTTTGTGTCATGGACCATCTGGAGCGGG
CCAAGGACATCCATTCTCTGTGTCTCACCAATTCGCATGTACATCGACAG
CTGCTACCGGTGCTCTATCGCTTCAACGTACGGTTCGAAAACAGCTCGGC
GCTGCACTGGGCGGCGCGTTATGGTAAGCTGGAACTTGTCCAGACGATGT
GTTATTACCGGGCCCGCGTCAATGTGTATCTCCATGGCTACACACCTCTT
CATGTTGCCGCAATGTTCGGACAGGCACCCGTTGTGAGATGGCTGCTTTC
GTACGACGGCATTGATGTCAACTGCCGCGGCGAGGGACTGGGCTTGACCC
CGCTTGGTGTAGCGGTGCGGAGGGAGGATGTAGAGGTTGTTCAGGTGTTG
CTTTCAGATGCCCGTACGGATATCAACGCAGGAAGCCGAGACAACAAGAC
ACCGCTGCTGGATGCCATCAAGCATCGGCACCTCGTCATTCTGCGATTGC
TTCTGGCCGATGCGAGAATTGAGATGCATCCACAGGGCCAGTCAGCCTCG
CCATTGATGTACGCCATGCGCAAAGACTTTGGCTGCGGCGGTCGCGCGCT
CCTAGCGCATGGCGACATTGACGTCTCAGCACGAGACTTGAAGGACCGGA
CGGTTCTGCACTATGCTGTTCTGCACAACGATGACGGACTTGTGCAGCTC
TTGCTTCAGAAGCAGGACCTTGATGTGAACGCGCAGGATTGTCTTGGTAT
GACCGCCCTGCATCGTGCCATCATCAAAGACAATAGACGAATCGTCGCCC
TGCTCCTGACACGCAGTGACCTTGATGTCTCGCTTTGCGGTGCCGATGGG
CACTGGAAGATATACGAAGAAATGCCGCCATTATGTCTGGCCGTTGCCCT
CCGCAGGAACCGCATCTGCCAGCTTCTGCTGGAAGCCCCTACGGATGCCG
ATGTGCGCACGGCCAGCGGGAATTCCCCCTTACATCTAGCCGCAGGCATG
GCGGATCTTGATTTGCTCACGCTCTTGCTCAACCAACCAGACATCAAGCT
AAACGGCCGGAACGACGACGGGTTCACAGCTCTGCATGAAGCCACAACCC
GCGGGTACCTGTCCGTTGCCAAGCTGCTCCTCGCTGCGCCAGAGGTGGAT
GCAAATGTGGGAGATACATGTGGGCGGACCGCACTCTGGTGGGCGACGAA
GCGCTCTGACGAGATTCTGACAAAGCGGCTGCTATGCGAAGACGACCTCG
ATCTTAATGTTGTAGGCCGGGATGGATCAACATCCCTCCATCATGCGATC
CAGTACCGGAACCGAACCATAGCACGGCTACTTCTCTGCGAGGAGAGACT
GGATATCAATGTACCGGGCATGACCGGTTGGACTCCACTTGTGTGGGCCG
TGCATCAAGCAGACATTAACATGGCCAGACTGTTGCTTGCGAGAGACGAT
CTGCAGCTGGATCCAATCTGCGCGGGAAACGCATCGGCACTGGGCCTGGC
AGCGGGACGAGGCCACACCAAGATTGTGAACTTATTCCTCGAGCACCGGG
ATCGCTTGGACATTAATCTCCCAACCCTGGCAGGCGAGACCCCACTATGC
CGGGCCGCAGCAGCCGGGCATCATGATGTGGTCGATCTCCTCCTTCAAGA
TCCTCAGCTGGATGTCAACCGGGCGGACCTCATTGGACGCAGTCCGCTGT
GCTGGGCGGTGTATGCGGGACAGTTCAACGTTGTGAGACGTTTGCTTCAG
GACAGAAGAGTCGTGATTGAAGGGGATTACTTCCGGCGACCAGCACTGGC
GGCCGCTCATGAGATGGGACATGCAGAAATTGCTGATCTTCTTAAAGCAT
ATAGACTCGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2830091..2832965 + |
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