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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:88737..89946+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005906-T1 ID=CBS51388_005906-T1|Name=CBS51388_005906-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1210bp|location=Sequence derived from alignment at An09:88737..89946+ (Aspergillus niger CBS 513.88)
ATGTCTCGTCTCACAGTTGTAGTTATCGGCGCTACTGGATCGCAGGTGCG
TCTCATGTTCAGCTTCCATCCATGAATACAGTCTGCTCTACCCAGCCTCT
AATGAATATTCCAGGGCGGCCCGGTCGCTAGGGAGCTCTTGAAAAACCCG
CATCTGTACTACGTCAGGGCTTTGACGCGCGATCCGACTAAGCCAGCAGC
GCAAGAGCTGGCAAGGCTTGGGGCAGAAGTTCAGGCGTTTGATCTCAATG
CAGGCATTGAAAGCCTTCTTCGAGCATTTACGGGCGCCGATGCCGTCTTT
GCTATGACAGACTTTTGGGCAACACGATCAGCACAGAAGGAGACTATCCA
GGGACGAAGCATTGTAGATGCTGCAGCTCGAACCTCGACCATTCGGCATT
TCATTTGGAGCTCGCTCCCAGATCCCGAGAAGGTATCCGGGGGCATACTG
AGAAACATTCATCACTGGAAGAGCAAGAGTGTAGTTGCAGACTACATACA
GCAGCAGTACCCACAGTTGTGGGGCAAGACTACTGTCGTGCTCTTCCCCA
ATTATTTCGAGAACTGCCTGTCTCATCCCGAACGCTACCTCTCACAACCT
GTTGGTCCACTTGTTTATCTGATCTACCGCATACATGGCTCTTCGGATCA
AAAGCTTACGAGATGATACTAGGATGCGCAGGGCGTGTATCATATGTACT
TGCCGCATAGCCCGTCCACTGCCATGCCGAACGGATCAATTCGCGATACA
GGCAAGCTTGTTCGAGTGATCCTGGAAGCTGAGGCTACTTACTTTACAAA
GACCGTGGCCTTCTATAGTGAAGCCATCTCGGAGGCGGAGAAACAAGCTA
TGATTGGCAAAAGTAACTATAACTACCCAATTGTGTATTTGGCTTAGTAT
GACCGATTTGGCTTACGTTGCATATATCAGAATACGGCTTACAGACAATG
TACCATGTAATAAGTCCCGATGAGCATCGAAAGAAGCTGGAGAGTCAAGG
TCTATCTCCTGAGATTGCCTTGGATTATACCGAGCAGCTTCTGATGTTCG
AAAAATTCGGAAACGTGTGTGAGGCATCAGAATTCATCCAGGCCAGAGAG
GTGCGTAAAGTCTGTGGTGCATTGACGTTTCTCATGACTAACTGATCAAT
CTAATGCAGATTCCGGGGCTTCACCTTCAGTCGTGGGCTGAGTTCCTCGA
AAGAAAATGA back to topCoding sequence (CDS) from alignment at An09:88737..89946+ >CBS51388_005906-T1 ID=CBS51388_005906-T1|Name=CBS51388_005906-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4665bp|location=Sequence derived from alignment at An09:88737..89946+ (Aspergillus niger CBS 513.88)
ATGTCTCGTCTCACAGTTGTAGTTATCGGCGCTACTGGATCGCAGGGCGG
CCCGGTCGCTAGGGAGCTCTTGAAAAACCCGCATCTGTACTACGTCAGGG
CTTTGACGCGCGATCCGACTAAGCCAGCAGCGCAAGAGCTGGCAAGGCTT
GGGGCAGAAGTTCAGGCGTTTGATCTCAATGCAGGCATTGAAAGCCTTCT
TCGAGCATTTACGGGCGCCGATGCCGTCTTTGCTATGACAGACTTTTGGG
CAACACGATCAGCACAGAAGGAGACTATCCAGGGACGAAGCATTGTAGAT
GCTGCAGCTCGAACCTCGACCATTCGGCATTTCATTTGGAGCTCGCTCCC
AGATCCCGAGAAGGTATCCGGGGGCATACTGAGAAACATTCATCACTGGA
AGAGCAAGAGTGTAGTTGCAGACTACATACAGCAGCAGTACCCACAGTTG
TGGGGCAAGACTACTGTCGTGCTCTTCCCCAATTATTTCGAGAACTGCCT
GTCTCATCCCGAACGCTACCTCTCACAACCTGGCGTGTATCATATGTACT
TGCCGCATAGCCCGTCCACTGCCATGCCGAACGGATCAATTCGCGATACA
GGCAAGCTTGTTCGAGTGATCCTGGAAGCTGAGGCTACTTACTTTACAAA
GACCGTGGCCTTCTATAGTGAAGCCATCTCGGAGGCGGAGAAACAAGCTA
TGATTGGCAAAAAATACGGCTTACAGACAATGTACCATGTAATAAGTCCC
GATGAGCATCGAAAGAAGCTGGAGAGTCAAGGTCTATCTCCTGAGATTGC
CTTGGATTATACCGAGCAGCTTCTGATGTTCGAAAAATTCGGAAACGTGT
GTGAGGCATCAGAATTCATCCAGGCCAGAGAGATTCCGGGGCTTCACCTT
CAGTCGTGGGCTGAGTTCCTCGAAAGAAAATGAATGTCTCGTCTCACAGT
TGTAGTTATCGGCGCTACTGGATCGCAGGGCGGCCCGGTCGCTAGGGAGC
TCTTGAAAAACCCGCATCTGTACTACGTCAGGGCTTTGACGCGCGATCCG
ACTAAGCCAGCAGCGCAAGAGCTGGCAAGGCTTGGGGCAGAAGTTCAGGC
GTTTGATCTCAATGCAGGCATTGAAAGCCTTCTTCGAGCATTTACGGGCG
CCGATGCCGTCTTTGCTATGACAGACTTTTGGGCAACACGATCAGCACAG
AAGGAGACTATCCAGGGACGAAGCATTGTAGATGCTGCAGCTCGAACCTC
GACCATTCGGCATTTCATTTGGAGCTCGCTCCCAGATCCCGAGAAGGTAT
CCGGGGGCATACTGAGAAACATTCATCACTGGAAGAGCAAGAGTGTAGTT
GCAGACTACATACAGCAGCAGTACCCACAGTTGTGGGGCAAGACTACTGT
CGTGCTCTTCCCCAATTATTTCGAGAACTGCCTGTCTCATCCCGAACGCT
ACCTCTCACAACCTGGCGTGTATCATATGTACTTGCCGCATAGCCCGTCC
ACTGCCATGCCGAACGGATCAATTCGCGATACAGGCAAGCTTGTTCGAGT
GATCCTGGAAGCTGAGGCTACTTACTTTACAAAGACCGTGGCCTTCTATA
GTGAAGCCATCTCGGAGGCGGAGAAACAAGCTATGATTGGCAAAAAATAC
GGCTTACAGACAATGTACCATGTAATAAGTCCCGATGAGCATCGAAAGAA
GCTGGAGAGTCAAGGTCTATCTCCTGAGATTGCCTTGGATTATACCGAGC
AGCTTCTGATGTTCGAAAAATTCGGAAACGTGTGTGAGGCATCAGAATTC
ATCCAGGCCAGAGAGATTCCGGGGCTTCACCTTCAGTCGTGGGCTGAGTT
CCTCGAAAGAAAATGAATGTCTCGTCTCACAGTTGTAGTTATCGGCGCTA
CTGGATCGCAGGGCGGCCCGGTCGCTAGGGAGCTCTTGAAAAACCCGCAT
CTGTACTACGTCAGGGCTTTGACGCGCGATCCGACTAAGCCAGCAGCGCA
AGAGCTGGCAAGGCTTGGGGCAGAAGTTCAGGCGTTTGATCTCAATGCAG
GCATTGAAAGCCTTCTTCGAGCATTTACGGGCGCCGATGCCGTCTTTGCT
ATGACAGACTTTTGGGCAACACGATCAGCACAGAAGGAGACTATCCAGGG
ACGAAGCATTGTAGATGCTGCAGCTCGAACCTCGACCATTCGGCATTTCA
TTTGGAGCTCGCTCCCAGATCCCGAGAAGGTATCCGGGGGCATACTGAGA
AACATTCATCACTGGAAGAGCAAGAGTGTAGTTGCAGACTACATACAGCA
GCAGTACCCACAGTTGTGGGGCAAGACTACTGTCGTGCTCTTCCCCAATT
ATTTCGAGAACTGCCTGTCTCATCCCGAACGCTACCTCTCACAACCTGGC
GTGTATCATATGTACTTGCCGCATAGCCCGTCCACTGCCATGCCGAACGG
ATCAATTCGCGATACAGGCAAGCTTGTTCGAGTGATCCTGGAAGCTGAGG
CTACTTACTTTACAAAGACCGTGGCCTTCTATAGTGAAGCCATCTCGGAG
GCGGAGAAACAAGCTATGATTGGCAAAAAATACGGCTTACAGACAATGTA
CCATGTAATAAGTCCCGATGAGCATCGAAAGAAGCTGGAGAGTCAAGGTC
TATCTCCTGAGATTGCCTTGGATTATACCGAGCAGCTTCTGATGTTCGAA
AAATTCGGAAACGTGTGTGAGGCATCAGAATTCATCCAGGCCAGAGAGAT
TCCGGGGCTTCACCTTCAGTCGTGGGCTGAGTTCCTCGAAAGAAAATGAA
TGTCTCGTCTCACAGTTGTAGTTATCGGCGCTACTGGATCGCAGGGCGGC
CCGGTCGCTAGGGAGCTCTTGAAAAACCCGCATCTGTACTACGTCAGGGC
TTTGACGCGCGATCCGACTAAGCCAGCAGCGCAAGAGCTGGCAAGGCTTG
GGGCAGAAGTTCAGGCGTTTGATCTCAATGCAGGCATTGAAAGCCTTCTT
CGAGCATTTACGGGCGCCGATGCCGTCTTTGCTATGACAGACTTTTGGGC
AACACGATCAGCACAGAAGGAGACTATCCAGGGACGAAGCATTGTAGATG
CTGCAGCTCGAACCTCGACCATTCGGCATTTCATTTGGAGCTCGCTCCCA
GATCCCGAGAAGGTATCCGGGGGCATACTGAGAAACATTCATCACTGGAA
GAGCAAGAGTGTAGTTGCAGACTACATACAGCAGCAGTACCCACAGTTGT
GGGGCAAGACTACTGTCGTGCTCTTCCCCAATTATTTCGAGAACTGCCTG
TCTCATCCCGAACGCTACCTCTCACAACCTGGCGTGTATCATATGTACTT
GCCGCATAGCCCGTCCACTGCCATGCCGAACGGATCAATTCGCGATACAG
GCAAGCTTGTTCGAGTGATCCTGGAAGCTGAGGCTACTTACTTTACAAAG
ACCGTGGCCTTCTATAGTGAAGCCATCTCGGAGGCGGAGAAACAAGCTAT
GATTGGCAAAAAATACGGCTTACAGACAATGTACCATGTAATAAGTCCCG
ATGAGCATCGAAAGAAGCTGGAGAGTCAAGGTCTATCTCCTGAGATTGCC
TTGGATTATACCGAGCAGCTTCTGATGTTCGAAAAATTCGGAAACGTGTG
TGAGGCATCAGAATTCATCCAGGCCAGAGAGATTCCGGGGCTTCACCTTC
AGTCGTGGGCTGAGTTCCTCGAAAGAAAATGAATGTCTCGTCTCACAGTT
GTAGTTATCGGCGCTACTGGATCGCAGGGCGGCCCGGTCGCTAGGGAGCT
CTTGAAAAACCCGCATCTGTACTACGTCAGGGCTTTGACGCGCGATCCGA
CTAAGCCAGCAGCGCAAGAGCTGGCAAGGCTTGGGGCAGAAGTTCAGGCG
TTTGATCTCAATGCAGGCATTGAAAGCCTTCTTCGAGCATTTACGGGCGC
CGATGCCGTCTTTGCTATGACAGACTTTTGGGCAACACGATCAGCACAGA
AGGAGACTATCCAGGGACGAAGCATTGTAGATGCTGCAGCTCGAACCTCG
ACCATTCGGCATTTCATTTGGAGCTCGCTCCCAGATCCCGAGAAGGTATC
CGGGGGCATACTGAGAAACATTCATCACTGGAAGAGCAAGAGTGTAGTTG
CAGACTACATACAGCAGCAGTACCCACAGTTGTGGGGCAAGACTACTGTC
GTGCTCTTCCCCAATTATTTCGAGAACTGCCTGTCTCATCCCGAACGCTA
CCTCTCACAACCTGGCGTGTATCATATGTACTTGCCGCATAGCCCGTCCA
CTGCCATGCCGAACGGATCAATTCGCGATACAGGCAAGCTTGTTCGAGTG
ATCCTGGAAGCTGAGGCTACTTACTTTACAAAGACCGTGGCCTTCTATAG
TGAAGCCATCTCGGAGGCGGAGAAACAAGCTATGATTGGCAAAAAATACG
GCTTACAGACAATGTACCATGTAATAAGTCCCGATGAGCATCGAAAGAAG
CTGGAGAGTCAAGGTCTATCTCCTGAGATTGCCTTGGATTATACCGAGCA
GCTTCTGATGTTCGAAAAATTCGGAAACGTGTGTGAGGCATCAGAATTCA
TCCAGGCCAGAGAGATTCCGGGGCTTCACCTTCAGTCGTGGGCTGAGTTC
CTCGAAAGAAAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_9.1 |
| Note | SMCOG1199:NmrA family protein |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:88737..89946 + |
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