You are here

Home

CBS51388_005930-T1, CBS51388_005930-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005930-T1
Unique NameCBS51388_005930-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:150075..150641+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005930-T1 ID=CBS51388_005930-T1|Name=CBS51388_005930-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=567bp|location=Sequence derived from alignment at An09:150075..150641+ (Aspergillus niger CBS 513.88)
ATGGACCCCTCACTTGTTGCTGACATCCCACTTACCCAAACATTTCACTA
TCGTACTACTACTCATCACTACGACGTGCGCTGGACTGCAATAGGTGACG
CTTCCCTGCCACCATTGATCTTCGTGCATGGCACCCCGTGGTCTTCGCGA
GTGTGGCACGTCTTTGCAAGATCCCTGGCTAGATATTTCCATGTCTATCT
CTTTGACAACCCGGGATTCGGCGAGAGTCCACTGGGAACTCCTCTCCCAG
GGAAAGAGGAAGCCATTAGCAAAGAAGTCGCCCTAGATGCGGATCTCGCA
CAGCAGTCGGAGGTGTTTGCTGCCCTTTACCAATCTTGGTCGAAGGACTG
GCCTCGGGCGCATAAGAAGGCACATGTTGTTGCCCATGATCACGGGGGGC
TGATGAGCTTACGGGCGCATCTCATCCATTCCTGCGAGTTTGCCAGTCTG
TGCTTGATTAATGTGGTTGCTTTGGGGCCATTCGGGCAGCCTCTGTTCAA
ATCGGTGGCGGAAAATGAAGACGTCTTTACCAGTTTGACCGGGCCCGATG
TTCGAAGGAATGGTTGA
back to top

Coding sequence (CDS) from alignment at An09:150075..150641+

>CBS51388_005930-T1 ID=CBS51388_005930-T1|Name=CBS51388_005930-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=567bp|location=Sequence derived from alignment at An09:150075..150641+ (Aspergillus niger CBS 513.88)
ATGGACCCCTCACTTGTTGCTGACATCCCACTTACCCAAACATTTCACTA
TCGTACTACTACTCATCACTACGACGTGCGCTGGACTGCAATAGGTGACG
CTTCCCTGCCACCATTGATCTTCGTGCATGGCACCCCGTGGTCTTCGCGA
GTGTGGCACGTCTTTGCAAGATCCCTGGCTAGATATTTCCATGTCTATCT
CTTTGACAACCCGGGATTCGGCGAGAGTCCACTGGGAACTCCTCTCCCAG
GGAAAGAGGAAGCCATTAGCAAAGAAGTCGCCCTAGATGCGGATCTCGCA
CAGCAGTCGGAGGTGTTTGCTGCCCTTTACCAATCTTGGTCGAAGGACTG
GCCTCGGGCGCATAAGAAGGCACATGTTGTTGCCCATGATCACGGGGGGC
TGATGAGCTTACGGGCGCATCTCATCCATTCCTGCGAGTTTGCCAGTCTG
TGCTTGATTAATGTGGTTGCTTTGGGGCCATTCGGGCAGCCTCTGTTCAA
ATCGGTGGCGGAAAATGAAGACGTCTTTACCAGTTTGACCGGGCCCGATG
TTCGAAGGAATGGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005930CBS51388_005930Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005930-T1.exon1CBS51388_005930-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005930-T1.cdsCBS51388_005930-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005930-T1CBS51388_005930-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:150075..150641 +
Powered by Drupal