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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:182463..184339+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005939-T1 ID=CBS51388_005939-T1|Name=CBS51388_005939-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1877bp|location=Sequence derived from alignment at An09:182463..184339+ (Aspergillus niger CBS 513.88)
ATGGTTACAGAAAGTCAAAACGCGGCACAAGTCGCCGAAACCTCAGCAGA
TGCACCGACCAAGCCTGAAAGCCTCGAATCAGAGAAAATAACACAAACAA
CGACGACACCACCGACAACGGCTACAACGGCCATTGTGATCATCTCAGTG
CTTCTGAGTATGTTCCTCGTCGCACTGGACAGAACCATCCTCGCCACGGT
AATATATGTGCACAAGGACGATCTTAGCTGCCTTCTGCTGACTACTTGTT
AGGCCATACCCCAAATAACAGACGAATACCATTCGCTCACAGATGTGGGC
TGGTATGGGAGCGCATACCTGTTGACTTGTTGTGCGTTGCAGTTGATATT
CGGAAAGATATATACACTCTTCTCAGTCAAGTGGACTCTTCTATGCAGTA
TCCTGGTTTTCGAAGCAGCTTCTGCCCTGAGTGGAGCGGCTCCCAACTCG
ACTGCCCTGATCGTGGGACGAGCTATCTGCGGTGTGGGTGCGGCTGGGAT
CTTTGCCGGTGTCGTAAGCGGATACTTCATTTTCAATATCTAATTCAATG
ATGGGCTGATCATTGTTTATCCAGGTGGTCTGCATCGTCCATGTCGTCCC
TCTCCATAAGCGTCCTCAGATCCAAGGAATGTTTGGTGCCCTGATGGGGG
TTTCTTCGATTGTGGGCCCCTTGATCGGCGGTGGGTTTACGTCGAACGTC
ACCTGGAGATGGTGTTTCTATATCAACCTGCCCGTCGGGGGAGTGGCGAT
GGCCGTTATCTTTATCTTTTTGAAGATCCCCGACCAGCCTACCGCTCGGA
CCCCTTTGGACGAGAAGATCAAGCAACTGGATATCCCTGGGACCATCCTC
CTGATTCCTGGCACCGTCTGCCTTCTTCTGGCATTACAATGGGGAGGCCA
GACCTACCCAGTGAGCGGACCCTTCCTAGATGTGCTTGAGTCGCACCTAA
CCATTCTTAGTGGAATGACGAGCGGGAGATCGCCTTGTTGACTCTCGCCG
GTGTCCTCTTGGTTGGCTTCTCTGCCGTCCAAGTCCTTCTCCCGAGGACC
GCCACTCTGCCTCCACGAATCATGAAGCAGCGTAGTGTCGCTGCGGCGTG
CTGGGCAACCCTGACTATCAATTGCGGAAACTATATCATCAGTAAGAATC
CCGCGACTTACCTCTCCCACACCGAAGAGCTAACCAGATGGTAGTCTACT
TTCTCCCGATCTGGTTCCAATCGACTAAAGGAGTGTCTGCTTCCGAGTCC
GGCATTCGCACGCTCCCCCTGATGATCTCCATGGTAGCCGGGTCCATAAC
CAGTGGTACGCTAAACACCAAGATTGGCTACTATACACCACTCGCCATTA
TCGGGACTTGCCTCATGTGCGTGGGAAACGGACTGCTCACCACGTTCGAG
GTGAATACCGGAGCGGGGAAATGGATTGGGTACCAGATCCTGTACGGTTT
CGGCCTGGGCTTAGCGTTTCAGGTACCAAACCTCGCGACACAGGCAAGCC
TGCCGAAGAAGGACGTACCTACAGGGCTAGCGCTGATGCTATTCGCAACT
CTACTGGGGGCGTCGGTGTTCGTATCGGCTGGAGAGAATGTGCTTGCCAA
TCAATTGGAGAAGAGGTTGGCCGGGGTCGATGGGGTTGATACTAGTTTGA
TCACCTCTGAGGGCGCTACTTCTTTGCTCCAATCGCTCCCGGATGATGTG
CGTAATACCGCTCTTGTTGCATATAATGGGGCTCTGAGAGAGGTCTTCCG
TGTTGGTTTAATCCCGACATGTCTGAGTGTCCTCGGGTCTGCAGCCCTGG
AGTGGAGGAGCGTCAAGAAGCCGGCAGGACAGAACTCTACGGAGAGCGGA
GGGAAGGAGACGACTGGAAAACCATGA back to topCoding sequence (CDS) from alignment at An09:182463..184339+ >CBS51388_005939-T1 ID=CBS51388_005939-T1|Name=CBS51388_005939-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8295bp|location=Sequence derived from alignment at An09:182463..184339+ (Aspergillus niger CBS 513.88)
ATGGTTACAGAAAGTCAAAACGCGGCACAAGTCGCCGAAACCTCAGCAGA
TGCACCGACCAAGCCTGAAAGCCTCGAATCAGAGAAAATAACACAAACAA
CGACGACACCACCGACAACGGCTACAACGGCCATTGTGATCATCTCAGTG
CTTCTGAGTATGTTCCTCGTCGCACTGGACAGAACCATCCTCGCCACGGC
CATACCCCAAATAACAGACGAATACCATTCGCTCACAGATGTGGGCTGGT
ATGGGAGCGCATACCTGTTGACTTGTTGTGCGTTGCAGTTGATATTCGGA
AAGATATATACACTCTTCTCAGTCAAGTGGACTCTTCTATGCAGTATCCT
GGTTTTCGAAGCAGCTTCTGCCCTGAGTGGAGCGGCTCCCAACTCGACTG
CCCTGATCGTGGGACGAGCTATCTGCGGTGTGGGTGCGGCTGGGATCTTT
GCCGGTGTCGTGGTCTGCATCGTCCATGTCGTCCCTCTCCATAAGCGTCC
TCAGATCCAAGGAATGTTTGGTGCCCTGATGGGGGTTTCTTCGATTGTGG
GCCCCTTGATCGGCGGTGGGTTTACGTCGAACGTCACCTGGAGATGGTGT
TTCTATATCAACCTGCCCGTCGGGGGAGTGGCGATGGCCGTTATCTTTAT
CTTTTTGAAGATCCCCGACCAGCCTACCGCTCGGACCCCTTTGGACGAGA
AGATCAAGCAACTGGATATCCCTGGGACCATCCTCCTGATTCCTGGCACC
GTCTGCCTTCTTCTGGCATTACAATGGGGAGGCCAGACCTACCCATGGAA
TGACGAGCGGGAGATCGCCTTGTTGACTCTCGCCGGTGTCCTCTTGGTTG
GCTTCTCTGCCGTCCAAGTCCTTCTCCCGAGGACCGCCACTCTGCCTCCA
CGAATCATGAAGCAGCGTAGTGTCGCTGCGGCGTGCTGGGCAACCCTGAC
TATCAATTGCGGAAACTATATCATCATCTACTTTCTCCCGATCTGGTTCC
AATCGACTAAAGGAGTGTCTGCTTCCGAGTCCGGCATTCGCACGCTCCCC
CTGATGATCTCCATGGTAGCCGGGTCCATAACCAGTGGTACGCTAAACAC
CAAGATTGGCTACTATACACCACTCGCCATTATCGGGACTTGCCTCATGT
GCGTGGGAAACGGACTGCTCACCACGTTCGAGGTGAATACCGGAGCGGGG
AAATGGATTGGGTACCAGATCCTGTACGGTTTCGGCCTGGGCTTAGCGTT
TCAGGTACCAAACCTCGCGACACAGGCAAGCCTGCCGAAGAAGGACGTAC
CTACAGGGCTAGCGCTGATGCTATTCGCAACTCTACTGGGGGCGTCGGTG
TTCGTATCGGCTGGAGAGAATGTGCTTGCCAATCAATTGGAGAAGAGGTT
GGCCGGGGTCGATGGGGTTGATACTAGTTTGATCACCTCTGAGGGCGCTA
CTTCTTTGCTCCAATCGCTCCCGGATGATGTGCGTAATACCGCTCTTGTT
GCATATAATGGGGCTCTGAGAGAGGTCTTCCGTGTTGGTTTAATCCCGAC
ATGTCTGAGTGTCCTCGGGTCTGCAGCCCTGGAGTGGAGGAGCGTCAAGA
AGCCGGCAGGACAGAACTCTACGGAGAGCGGAGGGAAGGAGACGACTGGA
AAACCATGAATGGTTACAGAAAGTCAAAACGCGGCACAAGTCGCCGAAAC
CTCAGCAGATGCACCGACCAAGCCTGAAAGCCTCGAATCAGAGAAAATAA
CACAAACAACGACGACACCACCGACAACGGCTACAACGGCCATTGTGATC
ATCTCAGTGCTTCTGAGTATGTTCCTCGTCGCACTGGACAGAACCATCCT
CGCCACGGCCATACCCCAAATAACAGACGAATACCATTCGCTCACAGATG
TGGGCTGGTATGGGAGCGCATACCTGTTGACTTGTTGTGCGTTGCAGTTG
ATATTCGGAAAGATATATACACTCTTCTCAGTCAAGTGGACTCTTCTATG
CAGTATCCTGGTTTTCGAAGCAGCTTCTGCCCTGAGTGGAGCGGCTCCCA
ACTCGACTGCCCTGATCGTGGGACGAGCTATCTGCGGTGTGGGTGCGGCT
GGGATCTTTGCCGGTGTCGTGGTCTGCATCGTCCATGTCGTCCCTCTCCA
TAAGCGTCCTCAGATCCAAGGAATGTTTGGTGCCCTGATGGGGGTTTCTT
CGATTGTGGGCCCCTTGATCGGCGGTGGGTTTACGTCGAACGTCACCTGG
AGATGGTGTTTCTATATCAACCTGCCCGTCGGGGGAGTGGCGATGGCCGT
TATCTTTATCTTTTTGAAGATCCCCGACCAGCCTACCGCTCGGACCCCTT
TGGACGAGAAGATCAAGCAACTGGATATCCCTGGGACCATCCTCCTGATT
CCTGGCACCGTCTGCCTTCTTCTGGCATTACAATGGGGAGGCCAGACCTA
CCCATGGAATGACGAGCGGGAGATCGCCTTGTTGACTCTCGCCGGTGTCC
TCTTGGTTGGCTTCTCTGCCGTCCAAGTCCTTCTCCCGAGGACCGCCACT
CTGCCTCCACGAATCATGAAGCAGCGTAGTGTCGCTGCGGCGTGCTGGGC
AACCCTGACTATCAATTGCGGAAACTATATCATCATCTACTTTCTCCCGA
TCTGGTTCCAATCGACTAAAGGAGTGTCTGCTTCCGAGTCCGGCATTCGC
ACGCTCCCCCTGATGATCTCCATGGTAGCCGGGTCCATAACCAGTGGTAC
GCTAAACACCAAGATTGGCTACTATACACCACTCGCCATTATCGGGACTT
GCCTCATGTGCGTGGGAAACGGACTGCTCACCACGTTCGAGGTGAATACC
GGAGCGGGGAAATGGATTGGGTACCAGATCCTGTACGGTTTCGGCCTGGG
CTTAGCGTTTCAGGTACCAAACCTCGCGACACAGGCAAGCCTGCCGAAGA
AGGACGTACCTACAGGGCTAGCGCTGATGCTATTCGCAACTCTACTGGGG
GCGTCGGTGTTCGTATCGGCTGGAGAGAATGTGCTTGCCAATCAATTGGA
GAAGAGGTTGGCCGGGGTCGATGGGGTTGATACTAGTTTGATCACCTCTG
AGGGCGCTACTTCTTTGCTCCAATCGCTCCCGGATGATGTGCGTAATACC
GCTCTTGTTGCATATAATGGGGCTCTGAGAGAGGTCTTCCGTGTTGGTTT
AATCCCGACATGTCTGAGTGTCCTCGGGTCTGCAGCCCTGGAGTGGAGGA
GCGTCAAGAAGCCGGCAGGACAGAACTCTACGGAGAGCGGAGGGAAGGAG
ACGACTGGAAAACCATGAATGGTTACAGAAAGTCAAAACGCGGCACAAGT
CGCCGAAACCTCAGCAGATGCACCGACCAAGCCTGAAAGCCTCGAATCAG
AGAAAATAACACAAACAACGACGACACCACCGACAACGGCTACAACGGCC
ATTGTGATCATCTCAGTGCTTCTGAGTATGTTCCTCGTCGCACTGGACAG
AACCATCCTCGCCACGGCCATACCCCAAATAACAGACGAATACCATTCGC
TCACAGATGTGGGCTGGTATGGGAGCGCATACCTGTTGACTTGTTGTGCG
TTGCAGTTGATATTCGGAAAGATATATACACTCTTCTCAGTCAAGTGGAC
TCTTCTATGCAGTATCCTGGTTTTCGAAGCAGCTTCTGCCCTGAGTGGAG
CGGCTCCCAACTCGACTGCCCTGATCGTGGGACGAGCTATCTGCGGTGTG
GGTGCGGCTGGGATCTTTGCCGGTGTCGTGGTCTGCATCGTCCATGTCGT
CCCTCTCCATAAGCGTCCTCAGATCCAAGGAATGTTTGGTGCCCTGATGG
GGGTTTCTTCGATTGTGGGCCCCTTGATCGGCGGTGGGTTTACGTCGAAC
GTCACCTGGAGATGGTGTTTCTATATCAACCTGCCCGTCGGGGGAGTGGC
GATGGCCGTTATCTTTATCTTTTTGAAGATCCCCGACCAGCCTACCGCTC
GGACCCCTTTGGACGAGAAGATCAAGCAACTGGATATCCCTGGGACCATC
CTCCTGATTCCTGGCACCGTCTGCCTTCTTCTGGCATTACAATGGGGAGG
CCAGACCTACCCATGGAATGACGAGCGGGAGATCGCCTTGTTGACTCTCG
CCGGTGTCCTCTTGGTTGGCTTCTCTGCCGTCCAAGTCCTTCTCCCGAGG
ACCGCCACTCTGCCTCCACGAATCATGAAGCAGCGTAGTGTCGCTGCGGC
GTGCTGGGCAACCCTGACTATCAATTGCGGAAACTATATCATCATCTACT
TTCTCCCGATCTGGTTCCAATCGACTAAAGGAGTGTCTGCTTCCGAGTCC
GGCATTCGCACGCTCCCCCTGATGATCTCCATGGTAGCCGGGTCCATAAC
CAGTGGTACGCTAAACACCAAGATTGGCTACTATACACCACTCGCCATTA
TCGGGACTTGCCTCATGTGCGTGGGAAACGGACTGCTCACCACGTTCGAG
GTGAATACCGGAGCGGGGAAATGGATTGGGTACCAGATCCTGTACGGTTT
CGGCCTGGGCTTAGCGTTTCAGGTACCAAACCTCGCGACACAGGCAAGCC
TGCCGAAGAAGGACGTACCTACAGGGCTAGCGCTGATGCTATTCGCAACT
CTACTGGGGGCGTCGGTGTTCGTATCGGCTGGAGAGAATGTGCTTGCCAA
TCAATTGGAGAAGAGGTTGGCCGGGGTCGATGGGGTTGATACTAGTTTGA
TCACCTCTGAGGGCGCTACTTCTTTGCTCCAATCGCTCCCGGATGATGTG
CGTAATACCGCTCTTGTTGCATATAATGGGGCTCTGAGAGAGGTCTTCCG
TGTTGGTTTAATCCCGACATGTCTGAGTGTCCTCGGGTCTGCAGCCCTGG
AGTGGAGGAGCGTCAAGAAGCCGGCAGGACAGAACTCTACGGAGAGCGGA
GGGAAGGAGACGACTGGAAAACCATGAATGGTTACAGAAAGTCAAAACGC
GGCACAAGTCGCCGAAACCTCAGCAGATGCACCGACCAAGCCTGAAAGCC
TCGAATCAGAGAAAATAACACAAACAACGACGACACCACCGACAACGGCT
ACAACGGCCATTGTGATCATCTCAGTGCTTCTGAGTATGTTCCTCGTCGC
ACTGGACAGAACCATCCTCGCCACGGCCATACCCCAAATAACAGACGAAT
ACCATTCGCTCACAGATGTGGGCTGGTATGGGAGCGCATACCTGTTGACT
TGTTGTGCGTTGCAGTTGATATTCGGAAAGATATATACACTCTTCTCAGT
CAAGTGGACTCTTCTATGCAGTATCCTGGTTTTCGAAGCAGCTTCTGCCC
TGAGTGGAGCGGCTCCCAACTCGACTGCCCTGATCGTGGGACGAGCTATC
TGCGGTGTGGGTGCGGCTGGGATCTTTGCCGGTGTCGTGGTCTGCATCGT
CCATGTCGTCCCTCTCCATAAGCGTCCTCAGATCCAAGGAATGTTTGGTG
CCCTGATGGGGGTTTCTTCGATTGTGGGCCCCTTGATCGGCGGTGGGTTT
ACGTCGAACGTCACCTGGAGATGGTGTTTCTATATCAACCTGCCCGTCGG
GGGAGTGGCGATGGCCGTTATCTTTATCTTTTTGAAGATCCCCGACCAGC
CTACCGCTCGGACCCCTTTGGACGAGAAGATCAAGCAACTGGATATCCCT
GGGACCATCCTCCTGATTCCTGGCACCGTCTGCCTTCTTCTGGCATTACA
ATGGGGAGGCCAGACCTACCCATGGAATGACGAGCGGGAGATCGCCTTGT
TGACTCTCGCCGGTGTCCTCTTGGTTGGCTTCTCTGCCGTCCAAGTCCTT
CTCCCGAGGACCGCCACTCTGCCTCCACGAATCATGAAGCAGCGTAGTGT
CGCTGCGGCGTGCTGGGCAACCCTGACTATCAATTGCGGAAACTATATCA
TCATCTACTTTCTCCCGATCTGGTTCCAATCGACTAAAGGAGTGTCTGCT
TCCGAGTCCGGCATTCGCACGCTCCCCCTGATGATCTCCATGGTAGCCGG
GTCCATAACCAGTGGTACGCTAAACACCAAGATTGGCTACTATACACCAC
TCGCCATTATCGGGACTTGCCTCATGTGCGTGGGAAACGGACTGCTCACC
ACGTTCGAGGTGAATACCGGAGCGGGGAAATGGATTGGGTACCAGATCCT
GTACGGTTTCGGCCTGGGCTTAGCGTTTCAGGTACCAAACCTCGCGACAC
AGGCAAGCCTGCCGAAGAAGGACGTACCTACAGGGCTAGCGCTGATGCTA
TTCGCAACTCTACTGGGGGCGTCGGTGTTCGTATCGGCTGGAGAGAATGT
GCTTGCCAATCAATTGGAGAAGAGGTTGGCCGGGGTCGATGGGGTTGATA
CTAGTTTGATCACCTCTGAGGGCGCTACTTCTTTGCTCCAATCGCTCCCG
GATGATGTGCGTAATACCGCTCTTGTTGCATATAATGGGGCTCTGAGAGA
GGTCTTCCGTGTTGGTTTAATCCCGACATGTCTGAGTGTCCTCGGGTCTG
CAGCCCTGGAGTGGAGGAGCGTCAAGAAGCCGGCAGGACAGAACTCTACG
GAGAGCGGAGGGAAGGAGACGACTGGAAAACCATGAATGGTTACAGAAAG
TCAAAACGCGGCACAAGTCGCCGAAACCTCAGCAGATGCACCGACCAAGC
CTGAAAGCCTCGAATCAGAGAAAATAACACAAACAACGACGACACCACCG
ACAACGGCTACAACGGCCATTGTGATCATCTCAGTGCTTCTGAGTATGTT
CCTCGTCGCACTGGACAGAACCATCCTCGCCACGGCCATACCCCAAATAA
CAGACGAATACCATTCGCTCACAGATGTGGGCTGGTATGGGAGCGCATAC
CTGTTGACTTGTTGTGCGTTGCAGTTGATATTCGGAAAGATATATACACT
CTTCTCAGTCAAGTGGACTCTTCTATGCAGTATCCTGGTTTTCGAAGCAG
CTTCTGCCCTGAGTGGAGCGGCTCCCAACTCGACTGCCCTGATCGTGGGA
CGAGCTATCTGCGGTGTGGGTGCGGCTGGGATCTTTGCCGGTGTCGTGGT
CTGCATCGTCCATGTCGTCCCTCTCCATAAGCGTCCTCAGATCCAAGGAA
TGTTTGGTGCCCTGATGGGGGTTTCTTCGATTGTGGGCCCCTTGATCGGC
GGTGGGTTTACGTCGAACGTCACCTGGAGATGGTGTTTCTATATCAACCT
GCCCGTCGGGGGAGTGGCGATGGCCGTTATCTTTATCTTTTTGAAGATCC
CCGACCAGCCTACCGCTCGGACCCCTTTGGACGAGAAGATCAAGCAACTG
GATATCCCTGGGACCATCCTCCTGATTCCTGGCACCGTCTGCCTTCTTCT
GGCATTACAATGGGGAGGCCAGACCTACCCATGGAATGACGAGCGGGAGA
TCGCCTTGTTGACTCTCGCCGGTGTCCTCTTGGTTGGCTTCTCTGCCGTC
CAAGTCCTTCTCCCGAGGACCGCCACTCTGCCTCCACGAATCATGAAGCA
GCGTAGTGTCGCTGCGGCGTGCTGGGCAACCCTGACTATCAATTGCGGAA
ACTATATCATCATCTACTTTCTCCCGATCTGGTTCCAATCGACTAAAGGA
GTGTCTGCTTCCGAGTCCGGCATTCGCACGCTCCCCCTGATGATCTCCAT
GGTAGCCGGGTCCATAACCAGTGGTACGCTAAACACCAAGATTGGCTACT
ATACACCACTCGCCATTATCGGGACTTGCCTCATGTGCGTGGGAAACGGA
CTGCTCACCACGTTCGAGGTGAATACCGGAGCGGGGAAATGGATTGGGTA
CCAGATCCTGTACGGTTTCGGCCTGGGCTTAGCGTTTCAGGTACCAAACC
TCGCGACACAGGCAAGCCTGCCGAAGAAGGACGTACCTACAGGGCTAGCG
CTGATGCTATTCGCAACTCTACTGGGGGCGTCGGTGTTCGTATCGGCTGG
AGAGAATGTGCTTGCCAATCAATTGGAGAAGAGGTTGGCCGGGGTCGATG
GGGTTGATACTAGTTTGATCACCTCTGAGGGCGCTACTTCTTTGCTCCAA
TCGCTCCCGGATGATGTGCGTAATACCGCTCTTGTTGCATATAATGGGGC
TCTGAGAGAGGTCTTCCGTGTTGGTTTAATCCCGACATGTCTGAGTGTCC
TCGGGTCTGCAGCCCTGGAGTGGAGGAGCGTCAAGAAGCCGGCAGGACAG
AACTCTACGGAGAGCGGAGGGAAGGAGACGACTGGAAAACCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF05978 |
| DBxref | PFAM:PF06609 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:182463..184339 + |
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