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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:350800..351871- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006001-T1 ID=CBS51388_006001-T1|Name=CBS51388_006001-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1072bp|location=Sequence derived from alignment at An09:350800..351871- (Aspergillus niger CBS 513.88)
ATGACCACCGTCACGGCCCCCGCGCCCTGGATCACCAGCAGCCAACAATG
TACCCTAGAGACATGTCCTCTATCATATGCCCATATCACCTATCTCCCTA
ACCTAGGCGGCAATGCCTTCTACATTGCTCTATTCGCCCTCTTCATCCCC
GTCCAACTCTACCTTGGCATTCGACACCGTACCTGGGGATACCTCTTCGG
CGCCATCTGCGGCCTTATCCTCGAAGTCCTGGGCTACATAGCACGCATTT
ACATGCGACACAACCCATTCATTGACCGGTGGTTCATCATGTTTGTTCAT
CCCAACAACCCCTCATCTCCCCTCCACCACTAACCAAATTAAATACAGGT
ATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCTCAGTGGCGCCATTTAC
GTTTCCCTAGCCCGAATTGTCGGCGCCTACTCGTCCCAATTATCCCGGAT
AAAACAGCGCAACTACTCCCTGATCTTCATCAGCTTCGACATCATCTCCC
TCCTGCTACAAGCCGCCGGAGGCGCCATCACCACCTCGAACTCCGTCTCC
GAAGTACAAGACGGGATCAACATCATGATAGCCGGTCTCAGCTCCCAAGT
CGCCTCTCTAACCCTCTACATCGTGATCTGTCTCGACTACGCCTTCCGAG
TCTACCGTCTCAGCGCACGGAATCCCTCCCCACCATCGAACATGTTCCGC
ATGGCAAACCACACGAAGCAGGAATCCGAAAGCCAAGATCTAGTCTCGGG
TTCCAGGGACTTGGTGACCTTGAACCCGGACTTCGCTAGTCTCCGAGCGA
GCAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGGGTTGGCGGTCGTGTGT
ATTTACATTCGAAGTTGTTTCCGGGTTGCGGAGCTGTGTGGTGGGTTCAG
TAGCCATTTGGCGAATGATCAGACGACGTTCATGGTGTTGGAGGGGGCGA
TGATTAGTATTGCGGTTATTGCGATGAGTAGTTGGGGGCATCCCGGCGTT
GGGTTTCATGGGAGGTGGGATGCATTGAATTATCCGATGTTTCAGAGGAA
GAAGAAGGGGGTGGATGTTTAG back to topCoding sequence (CDS) from alignment at An09:350800..351871- >CBS51388_006001-T1 ID=CBS51388_006001-T1|Name=CBS51388_006001-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2028bp|location=Sequence derived from alignment at An09:350800..351871- (Aspergillus niger CBS 513.88)
GTATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCTCAGTGGCGCCATTT
ACGTTTCCCTAGCCCGAATTGTCGGCGCCTACTCGTCCCAATTATCCCGG
ATAAAACAGCGCAACTACTCCCTGATCTTCATCAGCTTCGACATCATCTC
CCTCCTGCTACAAGCCGCCGGAGGCGCCATCACCACCTCGAACTCCGTCT
CCGAAGTACAAGACGGGATCAACATCATGATAGCCGGTCTCAGCTCCCAA
GTCGCCTCTCTAACCCTCTACATCGTGATCTGTCTCGACTACGCCTTCCG
AGTCTACCGTCTCAGCGCACGGAATCCCTCCCCACCATCGAACATGTTCC
GCATGGCAAACCACACGAAGCAGGAATCCGAAAGCCAAGATCTAGTCTCG
GGTTCCAGGGACTTGGTGACCTTGAACCCGGACTTCGCTAGTCTCCGAGC
GAGCAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGGGTTGGCGGTCGTGT
GTATTTACATTCGAAGTTGTTTCCGGGTTGCGGAGCTGTGTGGTGGGTTC
AGTAGCCATTTGGCGAATGATCAGACGACGTTCATGGTGTTGGAGGGGGC
GATGATTAGTATTGCGGTTATTGCGATGAGTAGTTGGGGGCATCCCGGCG
TTGGGTTTCATGGGAGGTGGGATGCATTGAATTATCCGATGTTTCAGAGG
AAGAAGAAGGGGGTGGATGTTTAGATGACCACCGTCACGGCCCCCGCGCC
CTGGATCACCAGCAGCCAACAATGTACCCTAGAGACATGTCCTCTATCAT
ATGCCCATATCACCTATCTCCCTAACCTAGGCGGCAATGCCTTCTACATT
GCTCTATTCGCCCTCTTCATCCCCGTCCAACTCTACCTTGGCATTCGACA
CCGTACCTGGGGATACCTCTTCGGCGCCATCTGCGGCCTTATCCTCGAAG
TCCTGGGCTACATAGCACGCATTTACATGCGACACAACCCATTCATTGAC
CGGTGGTTCATCATGTATCTCGTCTGCCTCACCATCGCCCCCGCCTTCCT
CAGTGGCGCCATTTACGTTTCCCTAGCCCGAATTGTCGGCGCCTACTCGT
CCCAATTATCCCGGATAAAACAGCGCAACTACTCCCTGATCTTCATCAGC
TTCGACATCATCTCCCTCCTGCTACAAGCCGCCGGAGGCGCCATCACCAC
CTCGAACTCCGTCTCCGAAGTACAAGACGGGATCAACATCATGATAGCCG
GTCTCAGCTCCCAAGTCGCCTCTCTAACCCTCTACATCGTGATCTGTCTC
GACTACGCCTTCCGAGTCTACCGTCTCAGCGCACGGAATCCCTCCCCACC
ATCGAACATGTTCCGCATGGCAAACCACACGAAGCAGGAATCCGAAAGCC
AAGATCTAGTCTCGGGTTCCAGGGACTTGGTGACCTTGAACCCGGACTTC
GCTAGTCTCCGAGCGAGCAAACGCTGGAAAGCGTTTCTGTTTTGCCAGGG
GTTGGCGGTCGTGTGTATTTACATTCGAAGTTGTTTCCGGGTTGCGGAGC
TGTGTGGTGGGTTCAGTAGCCATTTGGCGAATGATCAGACGACGTTCATG
GTGTTGGAGGGGGCGATGATTAGTATTGCGGTTATTGCGATGAGTAGTTG
GGGGCATCCCGGCGTTGGGTTTCATGGGAGGTGGGATGCATTGAATTATC
CGATGTTTCAGAGGAAGAAGAAGGGGGTGGATGTTTAGATGACCACCGTC
ACGGCCCCCGCGCCCTGGATCACCAGCAGCCAACAATGTACCCTAGAGAC
ATGTCCTCTATCATATGCCCATATCACCTATCTCCCTAACCTAGGCGGCA
ATGCCTTCTACATTGCTCTATTCGCCCTCTTCATCCCCGTCCAACTCTAC
CTTGGCATTCGACACCGTACCTGGGGATACCTCTTCGGCGCCATCTGCGG
CCTTATCCTCGAAGTCCTGGGCTACATAGCACGCATTTACATGCGACACA
ACCCATTCATTGACCGGTGGTTCATCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_9.3 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:350800..351871 - |
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