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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:537393..538521- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006068-T1 ID=CBS51388_006068-T1|Name=CBS51388_006068-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1129bp|location=Sequence derived from alignment at An09:537393..538521- (Aspergillus niger CBS 513.88)
ATGGTGGCTGTTGAGGATGAGGAGATGCCCTCGAGTAGGTTTTTCTACTT
CATCTGTCTTCTAGAATCAGGCTTCTAACCATGGACTCAGCCCCTTGCAG
TGATTGCTCTAATGTGTCCGTCGTGGACTGGGATGGCCCCAAAGATCCCC
AGAATCCATTCAACTGGCCCACTTCCAGAAAATGGCTAATGACCATCACT
GCTCTGATCACCACCTTCGTGGCCCTCATGAATGGCACTATCATTACAGT
CGCCCATGAAGCAATTAACGATGAATTCAACGTCAGCGATGCCACTTTCC
CCAACTCATACTGGCCCGTCGCCTCTTGGACGATGGGTGGCGTCTTCTTC
TGTCTTCTTATTCTTCCCCTCATGGAAGACTTCGGTACCCGTATTACATT
CCTTTTGACCAACTTCATCTTCTTAATATTTATTATACCACAAGCCGTTG
CTCAGAATTTCGCCACTCTCATCATCGTTCGCTTCTTCGCTGGTGGCTGC
GTGGCCGTGCTCGGCAACGGCTCAGCAAGCATCATCGGCAATCTCTTCGA
GACAGAGATGGCCCGCACGAAACCTGTCGCTCTCTGGATCGTCGCCTATC
TCGGTGGAAGTAGTGCGGGGCCACTAATCGGTGCACCTATCTTCGCACAT
CTGTCCTGGCGATGGCTCTCCTACCTGCAACTCATCTGGGTCGGCGCATT
GCTGCTCGTGAATATCGTCATCTTGAAGGAAACCAGGGGATCTGTTATTC
TGAAACGCCGAGCCCGGAAACTGCGAGATAAGGGCGAAAATGCCTACACG
CAGCATGAACTCCAAGCCGAGCCGCTACGCCAGGTCCTACTCACCAGCAT
CCGCCGACCCTTCAAGCTGCTCTTCACCGAATACGTCGTGTTCTTCTCCA
CGCTCTGGTCGGCCTTCACCGTCGGCACACTATACCTGTTCACGCAATCC
GTCGAGCAGGTCTTCGTGGGACTGTATAACTGGACGCCCGTGCAGGCAGG
GTACGTCCAGGCGGCGGTGTTCATCGGCGAAGTGTGCGGGTGGTTCTTCT
CGTTAATCTCTGCGAGATTGTACTTCAACTCTTCGAAGCGCAATAAGGAA
ATCCCCGGGACGCCCATTCCAGAGGCTAG back to topCoding sequence (CDS) from alignment at An09:537393..538521- >CBS51388_006068-T1 ID=CBS51388_006068-T1|Name=CBS51388_006068-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3060bp|location=Sequence derived from alignment at An09:537393..538521- (Aspergillus niger CBS 513.88)
AGGCTAGCCCCTTGCAGTGATTGCTCTAATGTGTCCGTCGTGGACTGGGA
TGGCCCCAAAGATCCCCAGAATCCATTCAACTGGCCCACTTCCAGAAAAT
GGCTAATGACCATCACTGCTCTGATCACCACCTTCGTGGCCCTCATGAAT
GGCACTATCATTACAGTCGCCCATGAAGCAATTAACGATGAATTCAACGT
CAGCGATGCCACTTTCCCCAACTCATACTGGCCCGTCGCCTCTTGGACGA
TGGGTGGCGTCTTCTTCTGTCTTCTTATTCTTCCCCTCATGGAAGACTTC
GGTACCCGTATTACATTCCTTTTGACCAACTTCATCTTCTTAATATTTAT
TATACCACAAGCCGTTGCTCAGAATTTCGCCACTCTCATCATCGTTCGCT
TCTTCGCTGGTGGCTGCGTGGCCGTGCTCGGCAACGGCTCAGCAAGCATC
ATCGGCAATCTCTTCGAGACAGAGATGGCCCGCACGAAACCTGTCGCTCT
CTGGATCGTCGCCTATCTCGGTGGAAGTAGTGCGGGGCCACTAATCGGTG
CACCTATCTTCGCACATCTGTCCTGGCGATGGCTCTCCTACCTGCAACTC
ATCTGGGTCGGCGCATTGCTGCTCGTGAATATCGTCATCTTGAAGGAAAC
CAGGGGATCTGTTATTCTGAAACGCCGAGCCCGGAAACTGCGAGATAAGG
GCGAAAATGCCTACACGCAGCATGAACTCCAAGCCGAGCCGCTACGCCAG
GTCCTACTCACCAGCATCCGCCGACCCTTCAAGCTGCTCTTCACCGAATA
CGTCGTGTTCTTCTCCACGCTCTGGTCGGCCTTCACCGTCGGCACACTAT
ACCTGTTCACGCAATCCGTCGAGCAGGTCTTCGTGGGACTGTATAACTGG
ACGCCCGTGCAGGCAGGGTACGTCCAGGCGGCGGTGTTCATCGGCGAAGT
GTGCGGGTGGTTCTTCTCGTTAATCTCTGCGAGATTATGGTGGCTGTTGA
GGATGAGGAGATGCCCTCGAAGGCTAGCCCCTTGCAGTGATTGCTCTAAT
GTGTCCGTCGTGGACTGGGATGGCCCCAAAGATCCCCAGAATCCATTCAA
CTGGCCCACTTCCAGAAAATGGCTAATGACCATCACTGCTCTGATCACCA
CCTTCGTGGCCCTCATGAATGGCACTATCATTACAGTCGCCCATGAAGCA
ATTAACGATGAATTCAACGTCAGCGATGCCACTTTCCCCAACTCATACTG
GCCCGTCGCCTCTTGGACGATGGGTGGCGTCTTCTTCTGTCTTCTTATTC
TTCCCCTCATGGAAGACTTCGGTACCCGTATTACATTCCTTTTGACCAAC
TTCATCTTCTTAATATTTATTATACCACAAGCCGTTGCTCAGAATTTCGC
CACTCTCATCATCGTTCGCTTCTTCGCTGGTGGCTGCGTGGCCGTGCTCG
GCAACGGCTCAGCAAGCATCATCGGCAATCTCTTCGAGACAGAGATGGCC
CGCACGAAACCTGTCGCTCTCTGGATCGTCGCCTATCTCGGTGGAAGTAG
TGCGGGGCCACTAATCGGTGCACCTATCTTCGCACATCTGTCCTGGCGAT
GGCTCTCCTACCTGCAACTCATCTGGGTCGGCGCATTGCTGCTCGTGAAT
ATCGTCATCTTGAAGGAAACCAGGGGATCTGTTATTCTGAAACGCCGAGC
CCGGAAACTGCGAGATAAGGGCGAAAATGCCTACACGCAGCATGAACTCC
AAGCCGAGCCGCTACGCCAGGTCCTACTCACCAGCATCCGCCGACCCTTC
AAGCTGCTCTTCACCGAATACGTCGTGTTCTTCTCCACGCTCTGGTCGGC
CTTCACCGTCGGCACACTATACCTGTTCACGCAATCCGTCGAGCAGGTCT
TCGTGGGACTGTATAACTGGACGCCCGTGCAGGCAGGGTACGTCCAGGCG
GCGGTGTTCATCGGCGAAGTGTGCGGGTGGTTCTTCTCGTTAATCTCTGC
GAGATTATGGTGGCTGTTGAGGATGAGGAGATGCCCTCGAAGGCTAGCCC
CTTGCAGTGATTGCTCTAATGTGTCCGTCGTGGACTGGGATGGCCCCAAA
GATCCCCAGAATCCATTCAACTGGCCCACTTCCAGAAAATGGCTAATGAC
CATCACTGCTCTGATCACCACCTTCGTGGCCCTCATGAATGGCACTATCA
TTACAGTCGCCCATGAAGCAATTAACGATGAATTCAACGTCAGCGATGCC
ACTTTCCCCAACTCATACTGGCCCGTCGCCTCTTGGACGATGGGTGGCGT
CTTCTTCTGTCTTCTTATTCTTCCCCTCATGGAAGACTTCGGTACCCGTA
TTACATTCCTTTTGACCAACTTCATCTTCTTAATATTTATTATACCACAA
GCCGTTGCTCAGAATTTCGCCACTCTCATCATCGTTCGCTTCTTCGCTGG
TGGCTGCGTGGCCGTGCTCGGCAACGGCTCAGCAAGCATCATCGGCAATC
TCTTCGAGACAGAGATGGCCCGCACGAAACCTGTCGCTCTCTGGATCGTC
GCCTATCTCGGTGGAAGTAGTGCGGGGCCACTAATCGGTGCACCTATCTT
CGCACATCTGTCCTGGCGATGGCTCTCCTACCTGCAACTCATCTGGGTCG
GCGCATTGCTGCTCGTGAATATCGTCATCTTGAAGGAAACCAGGGGATCT
GTTATTCTGAAACGCCGAGCCCGGAAACTGCGAGATAAGGGCGAAAATGC
CTACACGCAGCATGAACTCCAAGCCGAGCCGCTACGCCAGGTCCTACTCA
CCAGCATCCGCCGACCCTTCAAGCTGCTCTTCACCGAATACGTCGTGTTC
TTCTCCACGCTCTGGTCGGCCTTCACCGTCGGCACACTATACCTGTTCAC
GCAATCCGTCGAGCAGGTCTTCGTGGGACTGTATAACTGGACGCCCGTGC
AGGCAGGGTACGTCCAGGCGGCGGTGTTCATCGGCGAAGTGTGCGGGTGG
TTCTTCTCGTTAATCTCTGCGAGATTATGGTGGCTGTTGAGGATGAGGAG
ATGCCCTCGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:537393..538521 - |
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