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CBS51388_006069-T1, CBS51388_006069-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006069-T1
Unique NameCBS51388_006069-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:540726..541542+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006069-T1 ID=CBS51388_006069-T1|Name=CBS51388_006069-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=817bp|location=Sequence derived from alignment at An09:540726..541542+ (Aspergillus niger CBS 513.88)
ATGCTCGCGTGGTGAGTTGAGCAATACCTACCCAATCACCACGGCTGCGA
CCTCCACCCCCCAGACTAACAATAGTAAACTACAGGTACCAGAGATGTCT
TATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGGTAAGCTTCA
ATCCCCCCCATATCTCATTCTTTCAGTAAAGCTAAGACGGAAATAATCAG
ACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAAAGAA
GGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTATACG
GTGGTGGTAAGCCCAGCCCCCGATCCCTCACCCCCCTTCATTCCCTCTAA
ACAAAAGCAAAAATAATATACAGCTGTTTTCGGCCCGGTCGCCACAAAAT
GGTTCCAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACT
CTTGCGGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGAT
TGGTGTCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGG
AGAAGCTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTC
TGGCCAGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCG
TGTGTTGACGGTTAATGTGGTTAATATTGGTATGTATATTTCTCTGCTTC
TTTTCTACGGATGTATCTTGGATATTGGGTAAAGCTAATACTTGGATAGG
ATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGG
TTGCACCGGGAGTTTGA
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Coding sequence (CDS) from alignment at An09:540726..541542+

>CBS51388_006069-T1 ID=CBS51388_006069-T1|Name=CBS51388_006069-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2730bp|location=Sequence derived from alignment at An09:540726..541542+ (Aspergillus niger CBS 513.88)
ATGCTCGCGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCA
GAGCCTCACCACAGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAAC
AAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGC
CGAATGGCTTTATACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATG
GTTCCAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTC
TTGCGGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATT
GGTGTCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGA
GAAGCTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCT
GGCCAGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGT
GTGTTGACGGTTAATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTT
GGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGC
TCGCGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGC
CTCACCACAGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGC
CGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAA
TGGCTTTATACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTC
CAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGC
GGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTG
TCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAG
CTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCC
AGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGT
TGACGGTTAATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTC
AATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGCTCGC
GTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGCCTCA
CCACAGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTC
GAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGC
TTTATACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAAT
TCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCG
CGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTT
CCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCA
GTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCG
GTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGAC
GGTTAATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTCAATA
GCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGCTCGCGTGG
TACCAGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCAC
AGCGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAA
AGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTA
TACGGTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCT
ACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCG
TTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTC
ACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAG
GACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTC
AGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTT
AATGTGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTCAATAGCGT
CCCTCATGGGGATGAGGTTGCACCGGGAGTTTGAATGCTCGCGTGGTACC
AGAGATGTCTTATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCG
ACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAAAGAA
GGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTATACG
GTGGTGCTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAG
AACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGG
TGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCA
GTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACG
TACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGAC
GCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATG
TGGTTAATATTGGATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCT
CATGGGGATGAGGTTGCACCGGGAGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_1CBS51388_006069Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006069-T1CBS51388_006069-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006069-T1.exon1CBS51388_006069-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006069-T1.exon2CBS51388_006069-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006069-T1.exon3CBS51388_006069-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006069-T1.exon4CBS51388_006069-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_006069-T1.exon5CBS51388_006069-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006069-T1.cdsCBS51388_006069-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR007248
DBxrefPFAM:PF04117
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:540726..541542 +
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