|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:543956..545405- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006071-T1 ID=CBS51388_006071-T1|Name=CBS51388_006071-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1450bp|location=Sequence derived from alignment at An09:543956..545405- (Aspergillus niger CBS 513.88)
ATGAATGATTTTGAAAGACTACGTCCAGTCGGTGAGTGAGATTTGCTTGA
ATTGAGAAGCCAAGGCCGACGGGGACTTGAATTGACAGCTGTCAGGGCCC
CTGGAGAAATACTCCACCGCACGCCATTCACTCGGACTATATTTCAACGT
CGCGGTGTCGGCAACCTACATCTTGCCAGACACCTTCACTCTGCCATTAA
AAGACTATGTGTATAAGGCATGTGAAACATTGATCGGCCAGCATCCTATC
CTGTCCGCCATCCCCGTCAATGAAGATACCGAAGATACCTGGTTCGTGCG
CCTCCCGGAGATTGACCTGAGCCAGTCGGTGGCATTTCAGAGGCGCACCC
GCGACTTCCCCAACGACGATGAACCGGATGTAGAATTGTGCGAATTGTTG
CAAGTTCAACATAGCACGGGGTTTACGGCTCCTTTGCCGTTCTGGAGACT
TTACATCCTAACGGATGAGGCGTATGACCGGCGCTTTACGGCAGTCTATG
TGTTCCACCATGCGATTGGGGACGGAACATCAGGGAAGGCTTTTCACCAG
ACGTTCCTAGATGCATTACACGCTGCTTCATCCTTGACCCCAGGCGAGGT
TAACCAAGTCATCCCGTCACCCAAATCACCGCTGCTGCCAAACCTGGAAG
CCCTCCATCCATGTCCTACGACCATCCCTTTTCTTCTTAATGCTCTCTTT
AGGGCAAAAGTATGGTCTCCTCGCGATTCCCGCCTCTGGACAGGCGCCAA
AATATCTGCTCCGATTGAGACTAAGCTACGCCAAATTGTCATTCCGGCCG
CTGTGTCTGCGGCGCTTAGAAAGAACTGTCGCCAAAACAATGCTACTGTC
ACCTCTGCTCTGCAAGCAGCAGTTGCCCGCGCCCTTTTCACCCACCTGCC
AGAGAAGTATACCAGAGTTCAAATGAATGGCGCACTGTCATGTCGAAGGT
GGCTAAAGGGAGGAGAGGTTACAGATCAGTCCATGGGCGTTTGGGTCATG
GACTTTGGGGAAAGCTTTTATCGAAACCAGGTGAATCAATATCCTGACAC
CTTCCCATGGGGTCAAGCCAGGAAGTCCCGCACGACGATCGAACAGGCAC
TGGGTCGCGAAGGAAAGAACGCCGGCGTATGTTTGCTCAAATATATAGAT
AATTTTCAGGATCTCTTTGGGGGTAAGATCGGCAAAAACCGAAATGAAAG
CTTTGAAGTGTCAAATGTGGGAATCTTGCAGCCCAAACAGGCAGAAGACC
CGTCGCGGCCGCAGATTAAACGGGCGATGTTCTCCCAGACACCCAGTGCT
TTAGGTGCAGCCCTGCACGTCTCGTCAATCACCGGTGGTGATGGCTGTTT
GATTTTGGGAATCACATGGCAGACAGGCATTGCGGAGCCAGAGCTGGTCA
ATGCGGTCATTGACACCCTAATTCAGCAGCTACACAATGCTGCGCGGTGA
back to topCoding sequence (CDS) from alignment at An09:543956..545405- >CBS51388_006071-T1 ID=CBS51388_006071-T1|Name=CBS51388_006071-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4059bp|location=Sequence derived from alignment at An09:543956..545405- (Aspergillus niger CBS 513.88)
GATCTCTTTGGGGGTAAGATCGGCAAAAACCGAAATGAAAGCTTTGAAGT
GTCAAATGTGGGAATCTTGCAGCCCAAACAGGCAGAAGACCCGTCGCGGC
CGCAGATTAAACGGGCGATGTTCTCCCAGACACCCAGTGCTTTAGGTGCA
GCCCTGCACGTCTCGTCAATCACCGGTGGTGATGGCTGTTTGATTTTGGG
AATCACATGGCAGACAGGCATTGCGGAGCCAGAGCTGGTCAATGCGGTCA
TTGACACCCTAATTCAGCAGCTACACAATGCTGCGCGGTGAGGCCCCTGG
AGAAATACTCCACCGCACGCCATTCACTCGGACTATATTTCAACGTCGCG
GTGTCGGCAACCTACATCTTGCCAGACACCTTCACTCTGCCATTAAAAGA
CTATGTGTATAAGGCATGTGAAACATTGATCGGCCAGCATCCTATCCTGT
CCGCCATCCCCGTCAATGAAGATACCGAAGATACCTGGTTCGTGCGCCTC
CCGGAGATTGACCTGAGCCAGTCGGTGGCATTTCAGAGGCGCACCCGCGA
CTTCCCCAACGACGATGAACCGGATGTAGAATTGTGCGAATTGTTGCAAG
TTCAACATAGCACGGGGTTTACGGCTCCTTTGCCGTTCTGGAGACTTTAC
ATCCTAACGGATGAGGCGTATGACCGGCGCTTTACGGCAGTCTATGTGTT
CCACCATGCGATTGGGGACGGAACATCAGGGAAGGCTTTTCACCAGACGT
TCCTAGATGCATTACACGCTGCTTCATCCTTGACCCCAGGCGAGGTTAAC
CAAGTCATCCCGTCACCCAAATCACCGCTGCTGCCAAACCTGGAAGCCCT
CCATCCATGTCCTACGACCATCCCTTTTCTTCTTAATGCTCTCTTTAGGG
CAAAAGTATGGTCTCCTCGCGATTCCCGCCTCTGGACAGGCGCCAAAATA
TCTGCTCCGATTGAGACTAAGCTACGCCAAATTGTCATTCCGGCCGCTGT
GTCTGCGGCGCTTAGAAAGAACTGTCGCCAAAACAATGCTACTGTCACCT
CTGCTCTGCAAGCAGCAGTTGCCCGCGCCCTTTTCACCCACCTGCCAGAG
AAGTATACCAGAGTTCAAATGAATGGCGCACTGTCATGTCGAAGGTGGCT
AAAGGGAGGAGAGGTTACAGATCAGTCCATGGGCGTTTGGGTCATGGACT
TTGGGGAAAGCTTTTATCGAAACCAGGTGAATCAATATCCTGACACCTTC
CCATGGGGTCAAGCCAGGAAGTCCCGCACGACGATCGAACAGGCACTGGG
TCGCGAAGGAAAGAACGCCGGCATGAATGATTTTGAAAGACTACGTCCAG
TCGGATCTCTTTGGGGGTAAGATCGGCAAAAACCGAAATGAAAGCTTTGA
AGTGTCAAATGTGGGAATCTTGCAGCCCAAACAGGCAGAAGACCCGTCGC
GGCCGCAGATTAAACGGGCGATGTTCTCCCAGACACCCAGTGCTTTAGGT
GCAGCCCTGCACGTCTCGTCAATCACCGGTGGTGATGGCTGTTTGATTTT
GGGAATCACATGGCAGACAGGCATTGCGGAGCCAGAGCTGGTCAATGCGG
TCATTGACACCCTAATTCAGCAGCTACACAATGCTGCGCGGTGAGGCCCC
TGGAGAAATACTCCACCGCACGCCATTCACTCGGACTATATTTCAACGTC
GCGGTGTCGGCAACCTACATCTTGCCAGACACCTTCACTCTGCCATTAAA
AGACTATGTGTATAAGGCATGTGAAACATTGATCGGCCAGCATCCTATCC
TGTCCGCCATCCCCGTCAATGAAGATACCGAAGATACCTGGTTCGTGCGC
CTCCCGGAGATTGACCTGAGCCAGTCGGTGGCATTTCAGAGGCGCACCCG
CGACTTCCCCAACGACGATGAACCGGATGTAGAATTGTGCGAATTGTTGC
AAGTTCAACATAGCACGGGGTTTACGGCTCCTTTGCCGTTCTGGAGACTT
TACATCCTAACGGATGAGGCGTATGACCGGCGCTTTACGGCAGTCTATGT
GTTCCACCATGCGATTGGGGACGGAACATCAGGGAAGGCTTTTCACCAGA
CGTTCCTAGATGCATTACACGCTGCTTCATCCTTGACCCCAGGCGAGGTT
AACCAAGTCATCCCGTCACCCAAATCACCGCTGCTGCCAAACCTGGAAGC
CCTCCATCCATGTCCTACGACCATCCCTTTTCTTCTTAATGCTCTCTTTA
GGGCAAAAGTATGGTCTCCTCGCGATTCCCGCCTCTGGACAGGCGCCAAA
ATATCTGCTCCGATTGAGACTAAGCTACGCCAAATTGTCATTCCGGCCGC
TGTGTCTGCGGCGCTTAGAAAGAACTGTCGCCAAAACAATGCTACTGTCA
CCTCTGCTCTGCAAGCAGCAGTTGCCCGCGCCCTTTTCACCCACCTGCCA
GAGAAGTATACCAGAGTTCAAATGAATGGCGCACTGTCATGTCGAAGGTG
GCTAAAGGGAGGAGAGGTTACAGATCAGTCCATGGGCGTTTGGGTCATGG
ACTTTGGGGAAAGCTTTTATCGAAACCAGGTGAATCAATATCCTGACACC
TTCCCATGGGGTCAAGCCAGGAAGTCCCGCACGACGATCGAACAGGCACT
GGGTCGCGAAGGAAAGAACGCCGGCATGAATGATTTTGAAAGACTACGTC
CAGTCGGATCTCTTTGGGGGTAAGATCGGCAAAAACCGAAATGAAAGCTT
TGAAGTGTCAAATGTGGGAATCTTGCAGCCCAAACAGGCAGAAGACCCGT
CGCGGCCGCAGATTAAACGGGCGATGTTCTCCCAGACACCCAGTGCTTTA
GGTGCAGCCCTGCACGTCTCGTCAATCACCGGTGGTGATGGCTGTTTGAT
TTTGGGAATCACATGGCAGACAGGCATTGCGGAGCCAGAGCTGGTCAATG
CGGTCATTGACACCCTAATTCAGCAGCTACACAATGCTGCGCGGTGAGGC
CCCTGGAGAAATACTCCACCGCACGCCATTCACTCGGACTATATTTCAAC
GTCGCGGTGTCGGCAACCTACATCTTGCCAGACACCTTCACTCTGCCATT
AAAAGACTATGTGTATAAGGCATGTGAAACATTGATCGGCCAGCATCCTA
TCCTGTCCGCCATCCCCGTCAATGAAGATACCGAAGATACCTGGTTCGTG
CGCCTCCCGGAGATTGACCTGAGCCAGTCGGTGGCATTTCAGAGGCGCAC
CCGCGACTTCCCCAACGACGATGAACCGGATGTAGAATTGTGCGAATTGT
TGCAAGTTCAACATAGCACGGGGTTTACGGCTCCTTTGCCGTTCTGGAGA
CTTTACATCCTAACGGATGAGGCGTATGACCGGCGCTTTACGGCAGTCTA
TGTGTTCCACCATGCGATTGGGGACGGAACATCAGGGAAGGCTTTTCACC
AGACGTTCCTAGATGCATTACACGCTGCTTCATCCTTGACCCCAGGCGAG
GTTAACCAAGTCATCCCGTCACCCAAATCACCGCTGCTGCCAAACCTGGA
AGCCCTCCATCCATGTCCTACGACCATCCCTTTTCTTCTTAATGCTCTCT
TTAGGGCAAAAGTATGGTCTCCTCGCGATTCCCGCCTCTGGACAGGCGCC
AAAATATCTGCTCCGATTGAGACTAAGCTACGCCAAATTGTCATTCCGGC
CGCTGTGTCTGCGGCGCTTAGAAAGAACTGTCGCCAAAACAATGCTACTG
TCACCTCTGCTCTGCAAGCAGCAGTTGCCCGCGCCCTTTTCACCCACCTG
CCAGAGAAGTATACCAGAGTTCAAATGAATGGCGCACTGTCATGTCGAAG
GTGGCTAAAGGGAGGAGAGGTTACAGATCAGTCCATGGGCGTTTGGGTCA
TGGACTTTGGGGAAAGCTTTTATCGAAACCAGGTGAATCAATATCCTGAC
ACCTTCCCATGGGGTCAAGCCAGGAAGTCCCGCACGACGATCGAACAGGC
ACTGGGTCGCGAAGGAAAGAACGCCGGCATGAATGATTTTGAAAGACTAC
GTCCAGTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023213 |
| DBxref | InterPro:IPR010828 |
| DBxref | PFAM:PF07247 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:543956..545405 - |
|
