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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:665273..666503- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006106-T1 ID=CBS51388_006106-T1|Name=CBS51388_006106-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1231bp|location=Sequence derived from alignment at An09:665273..666503- (Aspergillus niger CBS 513.88)
ATGAATGAAACCTTGTTCCAGCTGCCGCGTGTTCCGTTTATCCAAGGACA
CCGCTACACCGTCCGAGCAACAGAGGGTCCGATCAACCAAACGACCAACC
ACCAGCTGGAGAGTATGGGCGAGCCCGAACGAGGCAATTTAAAGTCAGTG
CTCGGTATGTTGACCCTCTTCTACCCGAGGCAATTGCTCTTGACTGCTTT
GTTTTACCTCTGCTGCCTATGGTCACTTCTCCACCCGATTGCTGGAGAAT
TATCCCTAGATGTCCAGACATAGAGACATGATGAAAGTGGCGTCAGCATG
ATCACAGTCACACGAACACCCTTCCCCATCCCCATCCATGTTTACTGCAC
CCCGCACGTAATACGCATAACTTATAAGCTCCCCCGGATCCTCGCCCCAG
GATCCTTCTCCCCACCAACACCAGCATCAGAATCCTTCTCTCCACTCTAC
TACCCTTACCCCAGACTCAAACACAAGTACACTCACAATGACCTACTCAA
CCACCCCCATCGACGTTCTCCGTGACGCTGAACGCGTCTTCGAAGTGATC
AAAAACCAAGGCATCGCCCTCATCCCCGGCAGCATCGGCTACGGCCTAGT
CGCCAGCGACCCAGCAGCCCTGGACCGGCTCTTCACGACGAAGCGCCGGA
AACCACACAAGAAGCACGCCATGATCGGAAGCTACGCGCTCCACCAAGAA
ATCCACGTCCTCCCGGCCCGCGAAGAGTCCATGGTTCGGACTCTAACCGT
GGATCTAGACGTGCCCGTCGGCGTTGCGGCCCCGTTTCGGGCCGACCACC
CAATCATCCAGAAACTCGGCCCTGAGTTGCTCTCGCGCTGCACGCACGAC
GGCACCCTCTCCATGCTAGTAAATGGGGGACCCTTACAGGATGAACTCAT
TCGATTGTGCCACGCTGCGGGGCTACCCCTGCTCGGTTCATCGGCTAATA
TCTCGGGGTCGGGGATGAAGGTCCGCCTTGAGGATATTGAGCCTGAGATC
GTGGAGGCCGCGGATATCGTTATCGATTATGGCAAGCGCACGTTTAGTGT
GCCGCGCGCGTCATCGACGATCATCAACTTTCGGGATATGAAGCTCGTGC
GGTATGGCGCTTGCTATGATGTAATTCAAGACGTATTGAGGAAGTTCTAT
GGGGTGGAGCTGCCGGAGGATCCGGGCAAGGACGAGTTGTTTTCGGGACA
TATTGATGTTCAGCAGGCGACTGTGTATTGA back to topCoding sequence (CDS) from alignment at An09:665273..666503- >CBS51388_006106-T1 ID=CBS51388_006106-T1|Name=CBS51388_006106-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1842bp|location=Sequence derived from alignment at An09:665273..666503- (Aspergillus niger CBS 513.88)
ACTCAAACACAAGTACACTCACAATGACCTACTCAACCACCCCCATCGAC
GTTCTCCGTGACGCTGAACGCGTCTTCGAAGTGATCAAAAACCAAGGCAT
CGCCCTCATCCCCGGCAGCATCGGCTACGGCCTAGTCGCCAGCGACCCAG
CAGCCCTGGACCGGCTCTTCACGACGAAGCGCCGGAAACCACACAAGAAG
CACGCCATGATCGGAAGCTACGCGCTCCACCAAGAAATCCACGTCCTCCC
GGCCCGCGAAGAGTCCATGGTTCGGACTCTAACCGTGGATCTAGACGTGC
CCGTCGGCGTTGCGGCCCCGTTTCGGGCCGACCACCCAATCATCCAGAAA
CTCGGCCCTGAGTTGCTCTCGCGCTGCACGCACGACGGCACCCTCTCCAT
GCTAGTAAATGGGGGACCCTTACAGGATGAACTCATTCGATTGTGCCACG
CTGCGGGGCTACCCCTGCTCGGTTCATCGGCTAATATCTCGGGGTCGGGG
ATGAAGGTCCGCCTTGAGGATATTGAGCCTGAGATCGTGGAGGCCGCGGA
TATCGTTATCGATTATGGCAAGCGCACGTTTAGTGTGCCGCGCGCGTCAT
CGACGATCATCAACTTTCGGGATATGAAGCTCGTGCGGTATGGCGCTTGC
TATGATGTAATTCAAGACGTATTGAGGAAGTTCTATGGGGTGGAGCTGCC
GGAGGATCCGGGCAAGGACGAGTTGTTTTCGGGACATATTGATGTTCAGC
AGGCGACTGTGTATTGAATGAATGAAACCTTGTTCCAGCTGCCGCGTGTT
CCGTTTATCCAAGGACACCGCTACACCGTCCGAGCAACAGAGGGTCCGAT
CAACCAAACGACCAACCACCAGCTGGAGAGTATGGGCGAGCCCGAACGAG
GCAATTTAAAGTCAGTGCTCGACTCAAACACAAGTACACTCACAATGACC
TACTCAACCACCCCCATCGACGTTCTCCGTGACGCTGAACGCGTCTTCGA
AGTGATCAAAAACCAAGGCATCGCCCTCATCCCCGGCAGCATCGGCTACG
GCCTAGTCGCCAGCGACCCAGCAGCCCTGGACCGGCTCTTCACGACGAAG
CGCCGGAAACCACACAAGAAGCACGCCATGATCGGAAGCTACGCGCTCCA
CCAAGAAATCCACGTCCTCCCGGCCCGCGAAGAGTCCATGGTTCGGACTC
TAACCGTGGATCTAGACGTGCCCGTCGGCGTTGCGGCCCCGTTTCGGGCC
GACCACCCAATCATCCAGAAACTCGGCCCTGAGTTGCTCTCGCGCTGCAC
GCACGACGGCACCCTCTCCATGCTAGTAAATGGGGGACCCTTACAGGATG
AACTCATTCGATTGTGCCACGCTGCGGGGCTACCCCTGCTCGGTTCATCG
GCTAATATCTCGGGGTCGGGGATGAAGGTCCGCCTTGAGGATATTGAGCC
TGAGATCGTGGAGGCCGCGGATATCGTTATCGATTATGGCAAGCGCACGT
TTAGTGTGCCGCGCGCGTCATCGACGATCATCAACTTTCGGGATATGAAG
CTCGTGCGGTATGGCGCTTGCTATGATGTAATTCAAGACGTATTGAGGAA
GTTCTATGGGGTGGAGCTGCCGGAGGATCCGGGCAAGGACGAGTTGTTTT
CGGGACATATTGATGTTCAGCAGGCGACTGTGTATTGAATGAATGAAACC
TTGTTCCAGCTGCCGCGTGTTCCGTTTATCCAAGGACACCGCTACACCGT
CCGAGCAACAGAGGGTCCGATCAACCAAACGACCAACCACCAGCTGGAGA
GTATGGGCGAGCCCGAACGAGGCAATTTAAAGTCAGTGCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003725 | double-stranded RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017945 |
| DBxref | InterPro:IPR006070 |
| DBxref | PFAM:PF01300 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:665273..666503 - |
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