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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:795999..796491+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006146-T1 ID=CBS51388_006146-T1|Name=CBS51388_006146-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=493bp|location=Sequence derived from alignment at An09:795999..796491+ (Aspergillus niger CBS 513.88)
ATGCTCTTCTTCAGGTAAGAAAGCGCGCGAGATCCTCAAACAAGCACCAA
AGCGACCACAGCTAACTCCCCCTCCCTACGGGGATGACTATTTGGCAGCT
TCTTCAAGACCCTAACCAACCAAACGGTGACCATCGAACTCAAGAACGAC
ATTCGCATCCGCGGCACCCTCAAATCCGTCGACCAGTACCTGAACATTAA
GCTGGACGATGTGGACGTCCTGGATCTGGATAAATACCCGCACTTGTCGT
CCGTAAAGAATATGTTTATTCGTGGTAGTGTGGTGCGGTATGTTATGCTG
CCGAGGTCGGAGGTGGACATTGGGCTTTTGGAGGATGCGACGAGGAGAGG
TATGTTTCTTCATCCCTGTCCCCTTGATCTAATTGAAGGAACATGCTTAG
ATGTTTCTGTATGTGTGTGTTTGGTTGTATAAATTGCTAATGATTGGTTT
GGTATATATAGAAGCTGCGAACCAGGCTGGGAAAGCTCGGTGA back to topCoding sequence (CDS) from alignment at An09:795999..796491+ >CBS51388_006146-T1 ID=CBS51388_006146-T1|Name=CBS51388_006146-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=891bp|location=Sequence derived from alignment at An09:795999..796491+ (Aspergillus niger CBS 513.88)
ATGCTCTTCTTCAGCTTCTTCAAGACCCTAACCAACCAAACGGTGACCAT
CGAACTCAAGAACGACATTCGCATCCGCGGCACCCTCAAATCCGTCGACC
AGTACCTGAACATTAAGCTGGACGATGTGGACGTCCTGGATCTGGATAAA
TACCCGCACTTGTCGTCCGTAAAGAATATGTTTATTCGTGGTAGTGTGGT
GCGGTATGTTATGCTGCCGAGGTCGGAGGTGGACATTGGGCTTTTGGAGG
ATGCGACGAGGAGAGAAGCTGCGAACCAGGCTGGGAAAGCTCGGTGAATG
CTCTTCTTCAGCTTCTTCAAGACCCTAACCAACCAAACGGTGACCATCGA
ACTCAAGAACGACATTCGCATCCGCGGCACCCTCAAATCCGTCGACCAGT
ACCTGAACATTAAGCTGGACGATGTGGACGTCCTGGATCTGGATAAATAC
CCGCACTTGTCGTCCGTAAAGAATATGTTTATTCGTGGTAGTGTGGTGCG
GTATGTTATGCTGCCGAGGTCGGAGGTGGACATTGGGCTTTTGGAGGATG
CGACGAGGAGAGAAGCTGCGAACCAGGCTGGGAAAGCTCGGTGAATGCTC
TTCTTCAGCTTCTTCAAGACCCTAACCAACCAAACGGTGACCATCGAACT
CAAGAACGACATTCGCATCCGCGGCACCCTCAAATCCGTCGACCAGTACC
TGAACATTAAGCTGGACGATGTGGACGTCCTGGATCTGGATAAATACCCG
CACTTGTCGTCCGTAAAGAATATGTTTATTCGTGGTAGTGTGGTGCGGTA
TGTTATGCTGCCGAGGTCGGAGGTGGACATTGGGCTTTTGGAGGATGCGA
CGAGGAGAGAAGCTGCGAACCAGGCTGGGAAAGCTCGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006397 | mRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR016654 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | U6 snRNA-associated Sm-like protein LSm2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:795999..796491 + |
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