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CBS51388_006153-T1, CBS51388_006153-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006153-T1
Unique NameCBS51388_006153-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:816712..818279+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006153-T1 ID=CBS51388_006153-T1|Name=CBS51388_006153-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1568bp|location=Sequence derived from alignment at An09:816712..818279+ (Aspergillus niger CBS 513.88)
ATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCGCTCCAC
CTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGAAGCCAG
CCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGTATATCG
CGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGAGAGCGA
TTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAGACTCGC
GAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAATAACAGCAGCAGC
AACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGACAGTGTT
GGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGAGTGTCT
TGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGTGATTGC
TTCTTGGATGGGGCTACTCCCACGGCTCTATGTAAGTGTCGCTCTTGTGC
CTGTTACTATATAGCTGTGTGATGTTGATTGAAACAGTCGCGGATAGTGG
CTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCAACCCGC
CGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTGAGCAGT
GTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAAGCATAT
TTCGAGAGGTTTTATTCAGGATACACCATTCATCACACCCACGACCTTGG
ATAATAATATTGGCATCATGGATGCTCCGTCGGAGGCAAAATATTTGAAA
GAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAATTTCCC
GACCAGACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTAAGATGA
CAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATGCCCGTA
TCAGCCGTGCTAGCACCACACGCATATCAATTTCAGTGTCATGAGTACAC
GATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGGGACCGT
ATATGTCGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTGAATGTA
TCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAAGGATAT
ACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATTTAGAGG
CCATAACGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTACAACGGG
TACCATGAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGGAAATAT
GGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAATTGATG
CGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGACAAATTC
TTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTTGTCGAC
GGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCATATCAT
TGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAGATGAAG
AGGATGACCAGGGTGTAG
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Coding sequence (CDS) from alignment at An09:816712..818279+

>CBS51388_006153-T1 ID=CBS51388_006153-T1|Name=CBS51388_006153-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3024bp|location=Sequence derived from alignment at An09:816712..818279+ (Aspergillus niger CBS 513.88)
ATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCGCTCCAC
CTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGAAGCCAG
CCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGTATATCG
CGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGAGAGCGA
TTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAGACTCGC
GAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAATAACAGCAGCAGC
AACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGACAGTGTT
GGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGAGTGTCT
TGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGTGATTGC
TTCTTGGATGGGGCTACTCCCACGGCTCTATTCGCGGATAGTGGCTTCGA
CTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCAACCCGCCGGTCG
ATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTGAGCAGTGTCAAG
CCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAAGCATATTTCGAG
AGGTTTTATTCAGGATACACCATTCATCACACCCACGACCTTGGATAATA
ATATTGGCATCATGGATGCTCCGTCGGAGGCAAAATATTTGAAAGAGGAT
CCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAATTTCCCGACCAG
ACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTAAGATGACAAAGA
GGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATGCCCGTATCAGCC
GTGCTAGCACCACACGCATATCAATTTCAGTGTCATGAGTACACGATCCA
GGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGGGACCGTATATGT
CGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTGAATGTATCCGAC
ACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAAGGATATACTCAT
GGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATTTAGAGGCCATAA
CGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTACAACGGGTACCAT
GAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGGAAATATGGCAAG
ACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAATTGATGCGTGTC
CATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGACAAATTCTTTTGT
ATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTTGTCGACGGTCAA
AAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCATATCATTGACTA
GAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAGATGAAGAGGATG
ACCAGGGTGTAGATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAA
AGTCCGCTCCACCTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTC
ATGAGAAGCCAGCCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTC
TACAGTATATCGCGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGA
CGATGAGAGCGATTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGA
AGCAAGACTCGCGAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAAT
AACAGCAGCAGCAACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCA
AGAGACAGTGTTGGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGA
GTCAGAGTGTCTTGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTA
CCGGGTGATTGCTTCTTGGATGGGGCTACTCCCACGGCTCTATTCGCGGA
TAGTGGCTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCA
ACCCGCCGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTG
AGCAGTGTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAA
GCATATTTCGAGAGGTTTTATTCAGGATACACCATTCATCACACCCACGA
CCTTGGATAATAATATTGGCATCATGGATGCTCCGTCGGAGGCAAAATAT
TTGAAAGAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAA
TTTCCCGACCAGACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTA
AGATGACAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATG
CCCGTATCAGCCGTGCTAGCACCACACGCATATCAATTTCAGTGTCATGA
GTACACGATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGG
GACCGTATATGTCGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTG
AATGTATCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAA
GGATATACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATT
TAGAGGCCATAACGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTAC
AACGGGTACCATGAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGG
AAATATGGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAA
TTGATGCGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGAC
AAATTCTTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTT
GTCGACGGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCA
TATCATTGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAG
ATGAAGAGGATGACCAGGGTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006153CBS51388_006153Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006153-T1.exon1CBS51388_006153-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006153-T1.exon2CBS51388_006153-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006153-T1.cdsCBS51388_006153-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006153-T1CBS51388_006153-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:816712..818279 +
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