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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:877279..879766+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006178-T1 ID=CBS51388_006178-T1|Name=CBS51388_006178-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2488bp|location=Sequence derived from alignment at An09:877279..879766+ (Aspergillus niger CBS 513.88)
ATGGTGAGGCAGCTTGTATGGCAGCGGGCCACCGCCTCTCAGAGGGTAAG
TCGTGCCGTTATCAGCCGATTGACTCCCAGCGCCTTAGACTAACCTCCAC
TTCCCCGTGCTATAGTTGGCCCCGAAGTGCCTCTCTCCGCAACGACTGTT
CAGTCGCCGTGGCCTGGCCACGGAGGCTTCTCCGGCAGCTTCTTCCCGCT
TGCCTCCCTACCCGAAGATCGTTCAGAACCTCGAAAACGTCCGTCGCGTG
CTCGGCCAGGACCGCAACCTGACCCTGGCGGAGAAGATCCTCTACGCCCA
TTTGGACAACCCCGAGGAGTCCCTTCTGACCGGCACCAACAATGGCCGTG
ATATTCGCGGCAAGGCCAACTTGAAGTTGAAGCCCGATCGCGTGGCGATG
CAGGATGCCTCGGCCCAGATGGCTCTGTTGCAGTTCATGTCTTGCGGACT
GCCCTCGACGGCCGTGCCCGCTAGTATCCACTGTGACCACATGATCGTTG
GTGAGCGTGGTGCTGACACTGATCTGCCGGCGTCCATCAAGGGTAACAGC
GAGGTGTTTGACTTTCTGGAGAGTGCGGCCAAGCGCTACGGTATTGAGTT
CTGGCCCCCTGGTGCCGGTATCATTCACCAGAGTGTTCTGGAGAACTACG
CTGCTCCGGGTCTGATGATGCTGGGAACTGACAGCCATACCCCCAATGCT
GGTGGTCTGGGTGCCATTGCCATTGGTGTCGGTGGTGCTGATGCCGTCGA
TGCGCTGGTTGACGCTCCCTGGGAGCTCAAGGCGCCCCGCGTCCTGGGTG
TGCGTCTGGAGGGCAAGCTCAACGGCTGGGCGGCCCCCAAGGATATCATC
CTCCACCTGGCTGGCAAGCTCACCGTTCGTGGTGGAACTGGCTTCATTAT
TGAGTACCACGGACCTGGTCTGGAGACCCTGAGCTGCACTGGTATGGCCA
CCATCTGTAACATGGGTGCTGAGGTGGGCGCGACGACCTCCGTGTTCCCC
TTCTCCCCCAACCACGTCCCCTACCTGCAGGCGACTCACCGGGCTGATGT
TGCCCGTGCTGCCTCTGAGATCGCCTCTTCTGGTCCCAGGAACCTCCTCC
GTGCCGATGGCGGTGCGGAGTATGACGAGCTGATCACCATCGACCTGTCG
ACGCTGGAGCCTCACATCAACGGTCCCTTCACTCCCGATTTCTCCGTTCC
CCTGTCTGCTTTCGCCGACACCGTTCGCGAGAAGCAATGGCCCGAATCCC
TTGGAGCGGGTTTGATTGGTAGCTGCACGAACAGTTCCTACGAGGACATG
ACCCGTGCGGAGAACCTGGTCAAGCAGGCCTCTGCTGCCGGCCTTAAGCC
CAAGTCCGACTTCTTCATCACTCCCGGTAGTGAGCAGATTCGCGCCACCC
TGGACCGCGATCAGACTCTGTCGACCTTCTCCCAGGCCGGCGGTACCGTC
CTGGCGAACGCCTGCGGTCCCTGCATTGGTCAGTGGAAGCGCACGGACGG
TGTCCCCAAGGGCGAGGATAACGCCATCCTTACTTCCTACAACCGTAACT
TCCCCGGTCGTAACGACGGCAACCGGAGAACCATGAACTTCCTGGCCTCC
CCTGAGCTCGTCACCGCCATGGTTTACTCTGGAAGCACCACCTTCAACCC
CATGACCGACAGCATCACCACCCCCAGCGGTGAGGAGTTCCGCTTCCAGC
CTCCTACCGGCTACGCTCTCCCCAGTGACGGCTTTGCCGATGGCAACCCT
GACTTCCAGCCCACTGCTGCTGTGCCCGATCCTTCCTGTGAAGTGATTGT
CTCCCCCACCTCGGATCGTCTGGCCCTGCTCGAGCCCTTCGCCCCCTTCC
CCAAGGGCGACCTGTCCGGCCTCAAGGTCCTGTACAAGGTCCGTGGCCAG
TGCACGACTGACACCATCTCGGCGGCTGGTCCGTGGTTGAAGTACAAGGG
TCATCTGCCCAACATTTCCGCCAACACCCTGATCGGTGCCGTCAACGCCG
CCACTGGCGAGACCAACGTCGCCTACGACGAGGCTGGCAAACAGTACTCC
ATTCCGGACCTGGCTGCCCAGTGGAAGGCCGACGGAGTTGAGTGGCTTGT
CGTGGCTGAGGAGAACTACGGCGAGGGTAGCGCTCGTGAGCACGCTGCTC
TGCAGCCCCGCTACCTGGGTGGACGCATCATCGTGGCCAAGAGCTTTGCC
CGTATCCACGAGACGAACCTGAAGAAGCAGGGTGTCGTGCCCTTGACCTT
CGAGAACCCGGCCGACTATGACAAGATCGACGCTTGTGACCAGGTGGCCA
CGGAGGGACTATATGAAGTGCTGCAGGCTGGCGGACAGGGCTCCATCCAG
CTGCGGGTGACCAAGCGCAGTGGCGAGTCGGTGGTGATCCCCGTCAAGCA
CACTCTCAGTCCGGACCAGTGTGCTTTCGTCCTGGCTGGTAGTGCGTTGA
ACTTGCTGGCTCAGAAGGCCAACAAGAAAAGTGCTTGA back to topCoding sequence (CDS) from alignment at An09:877279..879766+ >CBS51388_006178-T1 ID=CBS51388_006178-T1|Name=CBS51388_006178-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4836bp|location=Sequence derived from alignment at An09:877279..879766+ (Aspergillus niger CBS 513.88)
ATGGTGAGGCAGCTTGTATGGCAGCGGGCCACCGCCTCTCAGAGGTTGGC
CCCGAAGTGCCTCTCTCCGCAACGACTGTTCAGTCGCCGTGGCCTGGCCA
CGGAGGCTTCTCCGGCAGCTTCTTCCCGCTTGCCTCCCTACCCGAAGATC
GTTCAGAACCTCGAAAACGTCCGTCGCGTGCTCGGCCAGGACCGCAACCT
GACCCTGGCGGAGAAGATCCTCTACGCCCATTTGGACAACCCCGAGGAGT
CCCTTCTGACCGGCACCAACAATGGCCGTGATATTCGCGGCAAGGCCAAC
TTGAAGTTGAAGCCCGATCGCGTGGCGATGCAGGATGCCTCGGCCCAGAT
GGCTCTGTTGCAGTTCATGTCTTGCGGACTGCCCTCGACGGCCGTGCCCG
CTAGTATCCACTGTGACCACATGATCGTTGGTGAGCGTGGTGCTGACACT
GATCTGCCGGCGTCCATCAAGGGTAACAGCGAGGTGTTTGACTTTCTGGA
GAGTGCGGCCAAGCGCTACGGTATTGAGTTCTGGCCCCCTGGTGCCGGTA
TCATTCACCAGAGTGTTCTGGAGAACTACGCTGCTCCGGGTCTGATGATG
CTGGGAACTGACAGCCATACCCCCAATGCTGGTGGTCTGGGTGCCATTGC
CATTGGTGTCGGTGGTGCTGATGCCGTCGATGCGCTGGTTGACGCTCCCT
GGGAGCTCAAGGCGCCCCGCGTCCTGGGTGTGCGTCTGGAGGGCAAGCTC
AACGGCTGGGCGGCCCCCAAGGATATCATCCTCCACCTGGCTGGCAAGCT
CACCGTTCGTGGTGGAACTGGCTTCATTATTGAGTACCACGGACCTGGTC
TGGAGACCCTGAGCTGCACTGGTATGGCCACCATCTGTAACATGGGTGCT
GAGGTGGGCGCGACGACCTCCGTGTTCCCCTTCTCCCCCAACCACGTCCC
CTACCTGCAGGCGACTCACCGGGCTGATGTTGCCCGTGCTGCCTCTGAGA
TCGCCTCTTCTGGTCCCAGGAACCTCCTCCGTGCCGATGGCGGTGCGGAG
TATGACGAGCTGATCACCATCGACCTGTCGACGCTGGAGCCTCACATCAA
CGGTCCCTTCACTCCCGATTTCTCCGTTCCCCTGTCTGCTTTCGCCGACA
CCGTTCGCGAGAAGCAATGGCCCGAATCCCTTGGAGCGGGTTTGATTGGT
AGCTGCACGAACAGTTCCTACGAGGACATGACCCGTGCGGAGAACCTGGT
CAAGCAGGCCTCTGCTGCCGGCCTTAAGCCCAAGTCCGACTTCTTCATCA
CTCCCGGTAGTGAGCAGATTCGCGCCACCCTGGACCGCGATCAGACTCTG
TCGACCTTCTCCCAGGCCGGCGGTACCGTCCTGGCGAACGCCTGCGGTCC
CTGCATTGGTCAGTGGAAGCGCACGGACGGTGTCCCCAAGGGCGAGGATA
ACGCCATCCTTACTTCCTACAACCGTAACTTCCCCGGTCGTAACGACGGC
AACCGGAGAACCATGAACTTCCTGGCCTCCCCTGAGCTCGTCACCGCCAT
GGTTTACTCTGGAAGCACCACCTTCAACCCCATGACCGACAGCATCACCA
CCCCCAGCGGTGAGGAGTTCCGCTTCCAGCCTCCTACCGGCTACGCTCTC
CCCAGTGACGGCTTTGCCGATGGCAACCCTGACTTCCAGCCCACTGCTGC
TGTGCCCGATCCTTCCTGTGAAGTGATTGTCTCCCCCACCTCGGATCGTC
TGGCCCTGCTCGAGCCCTTCGCCCCCTTCCCCAAGGGCGACCTGTCCGGC
CTCAAGGTCCTGTACAAGGTCCGTGGCCAGTGCACGACTGACACCATCTC
GGCGGCTGGTCCGTGGTTGAAGTACAAGGGTCATCTGCCCAACATTTCCG
CCAACACCCTGATCGGTGCCGTCAACGCCGCCACTGGCGAGACCAACGTC
GCCTACGACGAGGCTGGCAAACAGTACTCCATTCCGGACCTGGCTGCCCA
GTGGAAGGCCGACGGAGTTGAGTGGCTTGTCGTGGCTGAGGAGAACTACG
GCGAGGGTAGCGCTCGTGAGCACGCTGCTCTGCAGCCCCGCTACCTGGGT
GGACGCATCATCGTGGCCAAGAGCTTTGCCCGTATCCACGAGACGAACCT
GAAGAAGCAGGGTGTCGTGCCCTTGACCTTCGAGAACCCGGCCGACTATG
ACAAGATCGACGCTTGTGACCAGGTGGCCACGGAGGGACTATATGAAGTG
CTGCAGGCTGGCGGACAGGGCTCCATCCAGCTGCGGGTGACCAAGCGCAG
TGGCGAGTCGGTGGTGATCCCCGTCAAGCACACTCTCAGTCCGGACCAGT
GTGCTTTCGTCCTGGCTGGTAGTGCGTTGAACTTGCTGGCTCAGAAGGCC
AACAAGAAAAGTGCTTGAATGGTGAGGCAGCTTGTATGGCAGCGGGCCAC
CGCCTCTCAGAGGTTGGCCCCGAAGTGCCTCTCTCCGCAACGACTGTTCA
GTCGCCGTGGCCTGGCCACGGAGGCTTCTCCGGCAGCTTCTTCCCGCTTG
CCTCCCTACCCGAAGATCGTTCAGAACCTCGAAAACGTCCGTCGCGTGCT
CGGCCAGGACCGCAACCTGACCCTGGCGGAGAAGATCCTCTACGCCCATT
TGGACAACCCCGAGGAGTCCCTTCTGACCGGCACCAACAATGGCCGTGAT
ATTCGCGGCAAGGCCAACTTGAAGTTGAAGCCCGATCGCGTGGCGATGCA
GGATGCCTCGGCCCAGATGGCTCTGTTGCAGTTCATGTCTTGCGGACTGC
CCTCGACGGCCGTGCCCGCTAGTATCCACTGTGACCACATGATCGTTGGT
GAGCGTGGTGCTGACACTGATCTGCCGGCGTCCATCAAGGGTAACAGCGA
GGTGTTTGACTTTCTGGAGAGTGCGGCCAAGCGCTACGGTATTGAGTTCT
GGCCCCCTGGTGCCGGTATCATTCACCAGAGTGTTCTGGAGAACTACGCT
GCTCCGGGTCTGATGATGCTGGGAACTGACAGCCATACCCCCAATGCTGG
TGGTCTGGGTGCCATTGCCATTGGTGTCGGTGGTGCTGATGCCGTCGATG
CGCTGGTTGACGCTCCCTGGGAGCTCAAGGCGCCCCGCGTCCTGGGTGTG
CGTCTGGAGGGCAAGCTCAACGGCTGGGCGGCCCCCAAGGATATCATCCT
CCACCTGGCTGGCAAGCTCACCGTTCGTGGTGGAACTGGCTTCATTATTG
AGTACCACGGACCTGGTCTGGAGACCCTGAGCTGCACTGGTATGGCCACC
ATCTGTAACATGGGTGCTGAGGTGGGCGCGACGACCTCCGTGTTCCCCTT
CTCCCCCAACCACGTCCCCTACCTGCAGGCGACTCACCGGGCTGATGTTG
CCCGTGCTGCCTCTGAGATCGCCTCTTCTGGTCCCAGGAACCTCCTCCGT
GCCGATGGCGGTGCGGAGTATGACGAGCTGATCACCATCGACCTGTCGAC
GCTGGAGCCTCACATCAACGGTCCCTTCACTCCCGATTTCTCCGTTCCCC
TGTCTGCTTTCGCCGACACCGTTCGCGAGAAGCAATGGCCCGAATCCCTT
GGAGCGGGTTTGATTGGTAGCTGCACGAACAGTTCCTACGAGGACATGAC
CCGTGCGGAGAACCTGGTCAAGCAGGCCTCTGCTGCCGGCCTTAAGCCCA
AGTCCGACTTCTTCATCACTCCCGGTAGTGAGCAGATTCGCGCCACCCTG
GACCGCGATCAGACTCTGTCGACCTTCTCCCAGGCCGGCGGTACCGTCCT
GGCGAACGCCTGCGGTCCCTGCATTGGTCAGTGGAAGCGCACGGACGGTG
TCCCCAAGGGCGAGGATAACGCCATCCTTACTTCCTACAACCGTAACTTC
CCCGGTCGTAACGACGGCAACCGGAGAACCATGAACTTCCTGGCCTCCCC
TGAGCTCGTCACCGCCATGGTTTACTCTGGAAGCACCACCTTCAACCCCA
TGACCGACAGCATCACCACCCCCAGCGGTGAGGAGTTCCGCTTCCAGCCT
CCTACCGGCTACGCTCTCCCCAGTGACGGCTTTGCCGATGGCAACCCTGA
CTTCCAGCCCACTGCTGCTGTGCCCGATCCTTCCTGTGAAGTGATTGTCT
CCCCCACCTCGGATCGTCTGGCCCTGCTCGAGCCCTTCGCCCCCTTCCCC
AAGGGCGACCTGTCCGGCCTCAAGGTCCTGTACAAGGTCCGTGGCCAGTG
CACGACTGACACCATCTCGGCGGCTGGTCCGTGGTTGAAGTACAAGGGTC
ATCTGCCCAACATTTCCGCCAACACCCTGATCGGTGCCGTCAACGCCGCC
ACTGGCGAGACCAACGTCGCCTACGACGAGGCTGGCAAACAGTACTCCAT
TCCGGACCTGGCTGCCCAGTGGAAGGCCGACGGAGTTGAGTGGCTTGTCG
TGGCTGAGGAGAACTACGGCGAGGGTAGCGCTCGTGAGCACGCTGCTCTG
CAGCCCCGCTACCTGGGTGGACGCATCATCGTGGCCAAGAGCTTTGCCCG
TATCCACGAGACGAACCTGAAGAAGCAGGGTGTCGTGCCCTTGACCTTCG
AGAACCCGGCCGACTATGACAAGATCGACGCTTGTGACCAGGTGGCCACG
GAGGGACTATATGAAGTGCTGCAGGCTGGCGGACAGGGCTCCATCCAGCT
GCGGGTGACCAAGCGCAGTGGCGAGTCGGTGGTGATCCCCGTCAAGCACA
CTCTCAGTCCGGACCAGTGTGCTTTCGTCCTGGCTGGTAGTGCGTTGAAC
TTGCTGGCTCAGAAGGCCAACAAGAAAAGTGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006099 | tricarboxylic acid cycle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
| GO:0003994 | aconitate hydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036008 |
| DBxref | InterPro:IPR018136 |
| DBxref | InterPro:IPR015928 |
| DBxref | InterPro:IPR000573 |
| DBxref | InterPro:IPR006248 |
| DBxref | InterPro:IPR015931 |
| DBxref | InterPro:IPR015932 |
| DBxref | InterPro:IPR001030 |
| DBxref | PFAM:PF00694 |
| DBxref | PFAM:PF00330 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:877279..879766 + |
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