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CBS51388_006254-T1, CBS51388_006254-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006254-T1
Unique NameCBS51388_006254-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1091075..1092331-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006254-T1 ID=CBS51388_006254-T1|Name=CBS51388_006254-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1257bp|location=Sequence derived from alignment at An09:1091075..1092331- (Aspergillus niger CBS 513.88)
ATGTCTGCCGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTCAGCGCCC
CGAGGTGAGCAAGGAGACGGCGAAGAAGATTTCTTTGGTGGAGGAGCAGT
TTGCTAGGGCGGAGGTGGAGCAGTGTATGTTCTTTCTTTCTTTCTATCTC
TCTCTCTCTGTCTTTGTTTTTGTTGATTTATTTGGGGATGGGGGATTGGG
ATTGGGATTGAGATTGTTATGGTTTGTTTGTGTCTAAACTAAAGGGTATA
ATAGTGCGCCAGTCTACTCTCCTGCTTCGTCCCCTTTTCGAAAAGCGCAA
CCAGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGGACTCGCGTCA
TGCTCAATGCGCCCGCCGAGGTGGAGGAATACATCACCATGACCGATGCC
ACGATCCTCGCTTCGACTCTTAAGAACCTGACCGTTGAGCGATTCGAGAT
CGATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTGACCTTCGAGT
TCCGCACCGGCGACGAGAACCCTTACTTTGAGAACGAGAAGCTTGTCAAG
ACCTTCTACTGGCGCAAGCAGGTCATCACTACCCCCAAGGGTCACAAGCG
CACCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAACTGGAAGAAGG
ACCAGGATCCTACCAAGGGTCTGCTGGACGCTGCTTGCGACCTTGCTGAG
GCGGAGAAGAAGGGCGGAGACCGTAAGAAGCTGCCTGAGTTCGCCAAGGT
CATTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAGGAGATGGGTG
ATGATGAGGATGAGCTCCCTGAGGATGGCCCTGGCGGCATGAGCTTCTTC
GCTTTCTTCGGCTACCGTGGCAGCGATGTCACTGCTGAGCAGTCCCAGGC
CGCGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTCAAGGGCGAGC
CTGTTGAGGGTGAGGATGAGGAGGACGAGGATGACGAGGATGACGACATT
GAGGATGAGTTCGATGACATTGAGGTCTTCCCTGGTGGTGAGGAGCTCGC
TATTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAGTACTATGGTG
AGTGGTTTTCGTATATTGGATGAAGTCCGAGCTAACCTTCCTTCCAGTCA
CGGATCAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCTTGATATC
TCGGGAGACGAGGAAGAGGACGAGAACGACCGTCCCCGCAAGAAGACCAA
GGTCTAA
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Coding sequence (CDS) from alignment at An09:1091075..1092331-

>CBS51388_006254-T1 ID=CBS51388_006254-T1|Name=CBS51388_006254-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3231bp|location=Sequence derived from alignment at An09:1091075..1092331- (Aspergillus niger CBS 513.88)
TCACGGATCAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCTTGAT
ATCTCGGGAGACGAGGAAGAGGACGAGAACGACCGTCCCCGCAAGAAGAC
CAAGGTCTAATGCGCCAGTCTACTCTCCTGCTTCGTCCCCTTTTCGAAAA
GCGCAACCAGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGGACTC
GCGTCATGCTCAATGCGCCCGCCGAGGTGGAGGAATACATCACCATGACC
GATGCCACGATCCTCGCTTCGACTCTTAAGAACCTGACCGTTGAGCGATT
CGAGATCGATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTGACCT
TCGAGTTCCGCACCGGCGACGAGAACCCTTACTTTGAGAACGAGAAGCTT
GTCAAGACCTTCTACTGGCGCAAGCAGGTCATCACTACCCCCAAGGGTCA
CAAGCGCACCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAACTGGA
AGAAGGACCAGGATCCTACCAAGGGTCTGCTGGACGCTGCTTGCGACCTT
GCTGAGGCGGAGAAGAAGGGCGGAGACCGTAAGAAGCTGCCTGAGTTCGC
CAAGGTCATTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAGGAGA
TGGGTGATGATGAGGATGAGCTCCCTGAGGATGGCCCTGGCGGCATGAGC
TTCTTCGCTTTCTTCGGCTACCGTGGCAGCGATGTCACTGCTGAGCAGTC
CCAGGCCGCGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTCAAGG
GCGAGCCTGTTGAGGGTGAGGATGAGGAGGACGAGGATGACGAGGATGAC
GACATTGAGGATGAGTTCGATGACATTGAGGTCTTCCCTGGTGGTGAGGA
GCTCGCTATTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAGTACT
ATGATGTCTGCCGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTCAGCG
CCCCGAGGTGAGCAAGGAGACGGCGAAGAAGATTTCTTTGGTGGAGGAGC
AGTTTGCTAGGGCGGAGGTGGAGCAGTTCACGGATCAGGCGATCGAGGAG
GTCGACTTTGACGACAGTGAGCTTGATATCTCGGGAGACGAGGAAGAGGA
CGAGAACGACCGTCCCCGCAAGAAGACCAAGGTCTAATGCGCCAGTCTAC
TCTCCTGCTTCGTCCCCTTTTCGAAAAGCGCAACCAGGTTATCGCCGAGC
CTGATGTGCGCGACACTTTCTGGACTCGCGTCATGCTCAATGCGCCCGCC
GAGGTGGAGGAATACATCACCATGACCGATGCCACGATCCTCGCTTCGAC
TCTTAAGAACCTGACCGTTGAGCGATTCGAGATCGATGAGAAGGGTCAGG
GCGAGCCCCGCAGCTTCCGCTTGACCTTCGAGTTCCGCACCGGCGACGAG
AACCCTTACTTTGAGAACGAGAAGCTTGTCAAGACCTTCTACTGGCGCAA
GCAGGTCATCACTACCCCCAAGGGTCACAAGCGCACCTGGGATGGTCTGG
TCTCCGAGCCCGTCCGCATCAACTGGAAGAAGGACCAGGATCCTACCAAG
GGTCTGCTGGACGCTGCTTGCGACCTTGCTGAGGCGGAGAAGAAGGGCGG
AGACCGTAAGAAGCTGCCTGAGTTCGCCAAGGTCATTGAGAAGAAGGATG
AGATTGAGGCTGCTGAGGACCAGGAGATGGGTGATGATGAGGATGAGCTC
CCTGAGGATGGCCCTGGCGGCATGAGCTTCTTCGCTTTCTTCGGCTACCG
TGGCAGCGATGTCACTGCTGAGCAGTCCCAGGCCGCGACCAAGGAGGATA
ACGAGAGGTTTGAGAAGCTCCTCAAGGGCGAGCCTGTTGAGGGTGAGGAT
GAGGAGGACGAGGATGACGAGGATGACGACATTGAGGATGAGTTCGATGA
CATTGAGGTCTTCCCTGGTGGTGAGGAGCTCGCTATTGCGATCGCTGAGG
ACCTCTGGCCCAACGCCTTGAAGTACTATGATGTCTGCCGAGGAAGCTAA
CACGTCGCTGTTGGAGCGCATTCAGCGCCCCGAGGTGAGCAAGGAGACGG
CGAAGAAGATTTCTTTGGTGGAGGAGCAGTTTGCTAGGGCGGAGGTGGAG
CAGTTCACGGATCAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCT
TGATATCTCGGGAGACGAGGAAGAGGACGAGAACGACCGTCCCCGCAAGA
AGACCAAGGTCTAATGCGCCAGTCTACTCTCCTGCTTCGTCCCCTTTTCG
AAAAGCGCAACCAGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGG
ACTCGCGTCATGCTCAATGCGCCCGCCGAGGTGGAGGAATACATCACCAT
GACCGATGCCACGATCCTCGCTTCGACTCTTAAGAACCTGACCGTTGAGC
GATTCGAGATCGATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTG
ACCTTCGAGTTCCGCACCGGCGACGAGAACCCTTACTTTGAGAACGAGAA
GCTTGTCAAGACCTTCTACTGGCGCAAGCAGGTCATCACTACCCCCAAGG
GTCACAAGCGCACCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAAC
TGGAAGAAGGACCAGGATCCTACCAAGGGTCTGCTGGACGCTGCTTGCGA
CCTTGCTGAGGCGGAGAAGAAGGGCGGAGACCGTAAGAAGCTGCCTGAGT
TCGCCAAGGTCATTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAG
GAGATGGGTGATGATGAGGATGAGCTCCCTGAGGATGGCCCTGGCGGCAT
GAGCTTCTTCGCTTTCTTCGGCTACCGTGGCAGCGATGTCACTGCTGAGC
AGTCCCAGGCCGCGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTC
AAGGGCGAGCCTGTTGAGGGTGAGGATGAGGAGGACGAGGATGACGAGGA
TGACGACATTGAGGATGAGTTCGATGACATTGAGGTCTTCCCTGGTGGTG
AGGAGCTCGCTATTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAG
TACTATGATGTCTGCCGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTC
AGCGCCCCGAGGTGAGCAAGGAGACGGCGAAGAAGATTTCTTTGGTGGAG
GAGCAGTTTGCTAGGGCGGAGGTGGAGCAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006254CBS51388_006254Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006254-T1CBS51388_006254-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006254-T1.cdsCBS51388_006254-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006254-T1.exon3CBS51388_006254-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006254-T1.exon2CBS51388_006254-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006254-T1.exon1CBS51388_006254-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR037231
DBxrefInterPro:IPR002164
DBxrefPFAM:PF00956
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1091075..1092331 -
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